TCONS_00061692 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061692
Unique NameTCONS_00061692
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1549

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061692 ID=TCONS_00061692|Name=TCONS_00061692|organism=Clytia hemisphaerica|type=transcript|length=1549bp
aatcaccttggcaataatttcaaagcgaggaaagtgatgttcgtgatgta
atttatatgaaaaggtgtattctatCTCTATGTAAAAGATTCAAAAAGAG
TTTGACATTGCGTTGATGGTGTGTTGTTAGTTTGTTGTAGGGTTTCAAAA
GGAggtcaaaagaagaaaatgaagttcTCATTTGTTTCATGGTTTCTGCT
GCTggttattgttgttgttgagaGCTCATATGGCAAAtcattgaattCCC
AATTGGATGATTTGGTTGCAAATGAAACCAGCACTTTTGAAAGATCATCA
CTAAAAAACACAACTACACCACCATCAGGAAAACAAAGGAATGATTCCAA
TGCTGAAGAAAATGAGAGCAATCATATGAACAACACAGTCCATAGAGAAT
GTACCCAATCTCACCCTCTGGCGACAACCACTACTCCCGAAACAACTACT
GTCGAAGATACAACAACAGCACTAGACACAAGTACATGGCCGGAAACAAC
TTATGAAACATCAACTGTCCCTGAAACATCGACTCTTCCTGAAACAACTA
CAGAGTTTATTGAATCCACAACGACCACCCCAAAAACAACGACCACTTCG
ACAACGACAACCACACCAACAACgacaacgacaacgaccaccacACCAAC
ACCAACAACGACAACgacaacgacaacgaccaccacCCCAGcaacgacaa
cgaccaccacaccaacaacgacaacaacaaTAACGACCACCCCAACTACA
AGCACGACAACAACCGAAGATCCAAGAACAGTTGTCATAGATTGTGATTT
TTCATCAGTGTGTAAGAATCCCAATGACGAACATGTCGTTTTCAGAAAGA
AAGATTATAAGTCAAATGGTTGGTTACTACATAATCCTTATACAGCCCGA
GCATACATCTACGTCCGATTCTATCCAAATCATATCGACAATTCTGCACA
ATGTGAGCTCCGTCAGAAAACACGTATGACCGTATCCTTTATTTACCGGC
CTGGAGTTGCCAGGCAGAGTGCGAGCTTTAACAGGCTCTATTTGTATGTC
TATTCCTACAAGTTGGAACGAGTTGGATGGCGTTATAAATATATAAAGAT
CGACTCGTATCATACGCTTCCATTTGGTCCGCAAACAAATGCAATTGCAC
ACTCTTGGAATCGATTTTCGGTTGATTTCAACATCAAATGTGGCAGATAT
ATGTTTgtTTATATCAGTACAGCAAGCTATCAAAACTATCCAATAGAATT
GGATAACCTGAAGATATTGATGTAGATTCACTGGAGAATTCTTCACTGAT
TTAcgatagaagttattcttatctATGAAAGTAACATTTAATCTAGTCGA
GCTTACTTATTGCACATTGAAGAAACAATCCAACTTTTATAAGGATGGCT
AGTTTTTATGAAAGTAAATGTATATTATTTCTGTCGTGTTCCTTGTTAAA
TTCATTTTGGAATGTTTAAGAATATTAAgagaatttttatttcaagataT
AAAgcattttgtaaacattctttAAAAACGAAAATAGAACAATGCTGTG
Run BLAST on NCBI

protein sequence of TCONS_00061692-protein

>TCONS_00061692-protein ID=TCONS_00061692-protein|Name=TCONS_00061692-protein|organism=Clytia hemisphaerica|type=polypeptide|length=368bp
MKFSFVSWFLLLVIVVVESSYGKSLNSQLDDLVANETSTFERSSLKNTTT
PPSGKQRNDSNAEENESNHMNNTVHRECTQSHPLATTTTPETTTVEDTTT
ALDTSTWPETTYETSTVPETSTLPETTTEFIESTTTTPKTTTTSTTTTTP
TTTTTTTTTPTPTTTTTTTTTTTPATTTTTTPTTTTTITTTPTTSTTTTE
DPRTVVIDCDFSSVCKNPNDEHVVFRKKDYKSNGWLLHNPYTARAYIYVR
FYPNHIDNSAQCELRQKTRMTVSFIYRPGVARQSASFNRLYLYVYSYKLE
RVGWRYKYIKIDSYHTLPFGPQTNAIAHSWNRFSVDFNIKCGRYMFVYIS
TASYQNYPIELDNLKILM
Run BLAST on NCBI

transcript from alignment at scaffold_36:1348149..1356000-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061692 ID=TCONS_00061692|Name=TCONS_00061692|organism=Clytia hemisphaerica|type=transcript|length=7852bp|location=Sequence derived from alignment at scaffold_36:1348149..1356000- (Clytia hemisphaerica)
AATCACCTTGGCAATAATTTCAAAGCGAGGAAAGTGATGTTCGTGATGTA ATTTATATGAAAAGGTGTATTCTATCTCTATGTAAAAGATTCAAAAAGAG TTTGACATTGCGTTGATGGTGTGTTGTTAGTTTGTTGTAGGGTTTCAAAA GGAGGTCAAAAGAAGAAAATGAAGTTCTCATTTGTTTCATGGTTTCTGCT GCTGGTTATTGTTGTTGTTGAGAGCTCATATGGCAAATCATGTAAGAATA TTTTACTCTTATTTTCTCGTTGATTGAGAAATTTCTTTTTTAACCAAAAG TTTTAAATTTGGGAGGTCCAGCTCATACTTGATCCCTAGGGAATATTATA TACGGCTAACTTTCAGATAATATATGAGATAGGGCAATGCGATATGCGAT AAACCTATTATAATCACGATATCATGCTGGATTAAAAATTTAGCACTTTT TCCAAAATATTTCGCGTGTTTGGGATGAAAAATAAGTATAGTGAAAGCTT TTTGAAACTGAATAATCACTATTTTACAATCTTCGAATCAAAAAAAAGGT TTGTTGGCAGATACTTCAGCTTTTACTAGTGAACTGAAATTAGAATCGTT CAGAAGGCTTTTGTCGGCATATGCTGACATCTGACAAATACAATTTAATG ACAAATAATCTGATAACAGCTGGTCATAATTTTCTTACGAGCACGGTAAA CCTCTGGAGATCCTTGAAAATTAACCATCTGAGGAAATATAGTCCTCCGT GGAAAATTCTACAACATAATCTTGTAGTACCCGGAAAGTTAAAAACTGAC TTTTCCTGAAACGGTGCCCTATTTTTAATACAATCACGCAACTTTGTTGT CATTCCCAGTCCTATAAGGCGAGTGTGGTCCTTACAAATTCGAGATTAGC ATATTCGTCAAATTGTTTTGTTTTCACCCATTCCTTTAGAGCTTAAGCGT GATGGGCAGAAAACAATCACAAATTGATCTCAAATTAATGAAAATGACAA AAACAAAACAAGTATTTATGGAGAACTTGTTGGTTGGGACCAGGAAAATC TTTAAAAAAATAAATCTGGGGGAGGGGGCCTTTAAAGGTGGAAAAGGGGT TATGAACATGGGTCTTATCCAGAATTGCAGGGCTAATAATATCTAAATAT TTGGATCAAGAAGTTCGACAATTTATGAATATTACGTGACTTGAGGCTTT AGTGTTTGGGTAATTTCAAAAAAATTCCAGTCCTATATCACACACCCAAT GGGAGCCTTTTTCACTCGGAAGTTCGCCTTGAATTTTGTCCCCGGTGGAA AAAAACAAACTGAAATTTCGCTTTAATTGAAAAATACCCCTGTGTTTAGT GACAAATATACATTTTGACCATCTCCACTGAATATGTGTAGGGTTGAGGA ACCCCATCATGCAATTGAAACCAGTGACCTACCATCTAGAAGCTACAATC AGTTCTGTAATATTTGGCATTAAAACAGTGATTTTCATTTTTTTTGAAGT CAAACCCCTCCCCCCAACTTCAATGGTTGGATTAGGTTCTTTTGGGGTTA TCAACCATTGAAGTTGGGGGAAGGGGGGCTTAGAGAATTAGAAACATAGC TTAGGGGTTATTTTTTAGGCTTCTACCAAAATATTACAGAGCTGATTGTA GTTTCTTTATTTCACCCTCTGGCAGACTGGTTAGAATATTTCACAGGGTT ATTGAGACAGGGGTGTAAAAACTTTCAGGTGCTATCTTTCCGATACATGC TAAATGCCATTTCATTGCAAGATGAAGTTTACAGAACGAAATTGTTTAGT AATTTTCGCTATTCTCACATCATGTCTAAAGATGAAATATAAAATTATGT GTTATCCTGAGTGCTTACCGAATTTCAATTTTTACAGTGAATTCCCAATT GGATGATTTGGTTGCAAATGAAACCAGCACTTTTGAAAGATCATCACTAA AAAACACAACTACACCACCATCAGGAAAACAAAGGAATGATTCCAATGCT GAAGAAAATGAGAGCAATCATATGAACAACACAGTCCATAGAGAATGTAC CCAATCTCACCCTCTGGCGACAACCACTACTCCCGAAACAACTACTGTCG AAGATACAACAACAGCACTAGACACAAGTACATGGCCGGAAACAACTTAT GAAACATCAACTGTCCCTGAAACATCGACTCTTCCTGAAACAACTACAGA GTTTATTGAATCCACAACGACCACCCCAAAAACAACGACCACTTCGACAA CGACAACCACACCAACAACGACAACGACAACGACCACCACACCAACACCA ACAACGACAACGACAACGACAACGACCACCACCCCAGCAACGACAACGAC CACCACACCAACAACGACAACAACAATAACGACCACCCCAACTACAAGCA CGACAACAACCGAAGATCCAAGAACAGTTGTCATAGGTAAGGTTTCGTTA TTTTTGCTGTAACTTTGGAAAAAAATCAAAAGTAAGGCCAAATTACAAGT AAGTAAAATTTTAGGCCAAAAAGTAAAAAAAAAAAAATCAAAAAAATTCA CTCTAAGCTATCCAACAAGCTATGAAGTAGCTTCTAACTCCTTTTACAAT CTTTCAAGAAATANTTTTTTGACTTGAAAAGGTCCGTCCATCTCCTGTAT TTTAATAGGCCATTTCACAGTCGAAATAGATCATTGGTAATCAGGACTGA TTGCGCCTTCATAACGGCTTTCTGCTGACCAGACGCACACATCTTGAATA TTTTTCAAAACTTTGGACCAATAGTAAGTCGTCATTAGCGTCCAGATTAC TCATTACGCTTTGCGACTGTGAAGTGACCTATGGAACAGCCCATTTAAAC GTCATTGAATCACTTTTACCTTGGAGAAAAGGTTCTTCAAATTTCCTGGA GATTGATGACCTGATGACTAAATGAAAGAGGAGAGGAGAAACGTAAATGA AACATGATGTCAGAAACTTTCGCGGGCAGAAAGTTTCGCGATACCGAAAA GTCGCGAAATTTCGCGAATTTAAGTTTCGCGATTTTTACTTTTTGAAGAA AATTTACGGAAGAAACTTTCGCGGTTTTTTGTGAATGTTCAATTTTAATA GCGATAACCTAGGGAATGAATGGCTAGGGAAAGTGGATAAAGAATTATTT CAAATCTCATTTTTGTCTTCAATCGAAAGAGTGATATGCTAATAAATGAA AAATAAACTATTTACACTTCTTCCTCCAATTCTGAATTCTCGTCACTGCT ATCTTCGGCGGTAATATCGACTCTCGTTCCGCATAATAATTCAAATTCCT CCGGAGATATATCTGCGATTGGCAGTAAATACTGGTTACCTATGTTTTTT TCGATTTTTCGCCTTTTAAAACTTGGAAAAAACTTTCGCGATTTTTAGGA AAATTTCATTTTTCGCGAAATTAACTTTCGCAAATTTCTTGTTTAATTTC TTACCTGGCAGAAACTTTCGCGAAAAAATGCCAAAAGCGCGAAATTTTCT GCCCGCGAAAGTTTCTGCCCTTAAAGTAATCGAATATTTTAATTTGAGAC GGGTAGGCAGACTTCCGGGCTATATTCGGAGCCTTACTGGACCATTTTTG AACTTTTGGATCCTCAGATCCTAAGGTTAAAGTTAAAACTCAGAGTTATC TCAGGCAAATTAAGGCACGTCCAAATTTATCTTAATTTTTTATCACCGTT TCCACTTGTCATAGCATATCACCTCATACATCGAAAGAAGCGTATTGGAG TATAGATCACTGGAATAGCTGTGCCATAATTAATTTTTTCACCCAAAAAA AGATATTAGACAAAAACCAAAAAATGCTGACGTCAGCAAAACTTGTTTTT TGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNATTTGGACAAAAGTTGCATATCAATAATAGGAACATTTT TGCATAATTTTTTTTTGCAAATTTTGCTGACGTCAGCAGAAATCAGCAAA ATACGAAAGTTTGCAATAAAGTGCTGACGTCAGCAAAATTTCAAAAAAAC TTTTTTTTAAAATGATCCTTTTAATGGTGTGCAACTTTGGTCCAAATTTC ATGTTTTTACCTTAAGCCAAACTGGAGTTATTCAAAAAACAAGTTTTGCT GACGTCAGCATTTTTTGGTTTTTGCCTTATATCTTTTTTTGGGTTAAAAA ATTAATTATGGCACAGCAATTCCAGTGATCTACACTCCAATACGCTTCTT TCGATGTATGAAGTGATATGCTATGACAAGTGGAAACGGTGATAAAAAAT TAACGTAAATTTAAAAAATCTGGACAGGCCTTAATTTGCCTGAGTTAAAA CTCTACCCTTCGAACCTACTTTAGAGCACTTACAAATCGATTGTGGTTTT AAAACTTCCTGGGGAATTTCCTATTTGTATCAAATATTTCTTGAAGGATT GTAGATCGGGAGATAAAGGCCTTAAAAATTTGAACTAGCGATTTTCTTAA AAAACTCAGAAAAAAAGGACCGTGGCACTTAAAGGGATAACCTTCTTCGC ATTACATAGCGTTACATAATAGTTAGTACAAAAACCCTGAACCTGATACT TACTGTTTTATCTTGATATCAACTCCCTAAGCTCTTAAGCATCAAAAACT AAAATCTCAAATTGCTCAGTTTTTTTATCATCACGTTTATTGTAAATTTA CGCCTCTTAGGATCTGGTTTAGGATTCAATTACGTGATCAAAAGTGAGCA AAATGAAGTGATTTCTCAACGAAAATTAAGCAGTAAGAAACAAAAGGCTT CCGCAGATCAGGGTTTCTAAACGTTTTTACGGTTACACTCTATCCGTCAT GTTTTATGTACTCTATTATCATTTTTAGATTGTGATTTTTCATCAGTGTG TAAGAATCCCAATGACGAACATGTCGTTTTCAGAAAGAAAGATTATAAGT CAAATGGTAAGAAATTTCCAATGTAAAAAGACGCTTAAAATTAAAATGAG TAAATATTGCAATCTCTGTAGTGTAAGGTCGTGGCTTTTTCATAAAGTCG AAAAACATATCCGAACTTATTTCGTACTTTCCAGTCTCTGGTTCGTAGTT TATCTGACTTCCTGGTACTATGTGAATTATTTTTTATGTTTTCTAACTGA CTGATTGACTTACCGAAAGATCACCACCGGTGGGATTCGAATTCACCAAA TGCAAAGTTCTATCAATTGGTAACACGATGCCTTATCCACTGCGCCACGG ATTCATGCCAGGAGAGTGTTTCTGACGGCTATTGATATTGTACAAACTAC AGACCAGACTATATTAAGAGAAAATCCCAAAAGAGTGCTTTTTTCGAGCT CCAACCCTAACCCTAACTGATAATAACCCAATTCCTAGCCAATCTGATAC GTAACCACACCCAAACCACACCTATACCCGACCCTACTAGGTCGCCCGCA GGTCCTGACACTATTCATGGATGCCGGATCCGAAAAATAGATGTATGTCT TTCGCCTTTATGAAGAAGCCTTCACCGTAGTATAACTTCTTTTCGAAGGA AGGGGCGAGCGAAATATCTGCTGGTGTTGCTCTTATACGCATCTTTTCGG TCAGGCTATTCAAGTTAAAAGTTTTGTGACTTTGGCCTTTTAGCAAGAAA AGCTAAAATGTTGGCTTAAAGGGACATATATAACAGTACTTGCAAAATTT GTAAACAAACTGTATGCAGCGGATACAAAATCAAAACAAATGTCACATGT CAAAATAAAAAATCAAACCAAATATGACTAATTTTGATTCTTCAATTGTT TAACAAGTTTGTTTTGGACACGTGATTTTAATTGTTCTCTTTAATGACAC GTGGTTCGCACAATGTTTACATTATACTACTTTTATGTCCCTTTAAAGGT TTTATTTTTACACAAGTGTTCCCGTTTTATATCAGTTTTCCTCTTTCTGA CCAATCTTGCTCCACATCCGTGTCAATCCAATCTGAAAAAGCTTGTGAAT GAAAATGATGAGTAAGCAAACGATATCACTCTTATTTAAAAACAAAACCT TTAAGAGCCGTAATCTTGACTTGAAAAAAGTTTGTCTAAACTCTAAAGTT CAATTTTTTAGATAATCACTTCCAAATGTCGTGTTCTAAATATTCGCTTC GAACATTTCAGGTTGGTTACTACATAATCCTTATACAGCCCGAGCATACA TCTACGTCCGATTCTATCCAAATCATATCGACAATTCTGCACAATGTGAG CTCCGTCAGAAAACACGTATGACCGTATCCTTTATTTACCGGCCTGGAGT TGCCAGGCAGAGTGCGAGCTTTAACAGGCTCTATTTGTATGTCTATTCCT ACAAGTTGGAACGAGTTGGATGGCGTTATAAATATATAAAGATCGACTCG TATCATACGCTTCCATTTGGTCCGCAAACAAATGCAATTGCACACTCTTG GAATCGATTTTCGGTTGATTTCAACATCAAATGTGGCAGATATATGTTTG TAAGTAATTTTGACAGATTGTCGATAAGGTTAGTATTATGAAGTAGATTT TAAACATGGTTTTTAACCACCCCAAATTTTAAGTTTTTGAGGCAATTATT TCTTGTGTGAATATTACTTATAAGAAATCGGGTGTCTAAGATTCTAAAAA GTCTTACACTTACCTTGGCCATCGAAGCTTTATGTTCTTATATAGTTTGT TCTTAAGATCGTGTCTGCTATATTTTTTTTAGGACCACTCAACTCGACTC AACTCACTTTATTTAATTGTTTTTTTTTCTTATTGCGGTTTGGGTGTTGG TATTTCACCGTCAGATGTCATCATATAAAGAAGTTTTATAAAAGCAAACT ATAGGAACACAAGGTTTTTTGGCCAAGATATTAAGTAACGGTTTAAGAAC ATTTTAAACTTTATTGACAGTAAAAGACCCAATTTCTTTGACAAGAACAC TCACAAAATGGTGAAAGTAACAGGCTTGAAACTCAAAAGGTTAAGAACGT ATGAATGATTCAAAAATTTAGAATGTTCTTATGTGTATATGATTGTTGCT TGACTATCCAAATGCTATCTATAAGCTGGGGGTAACCTTGCTGACTGACG GGGGTTGTGCCGCTGAAGTTCGAAAAATGGACCCTACTTGGGACTTATTT TTTTAAAGTGACCCTGAATGGGACTAAAATTACAAAATTTTATCAAATAT CTCCATACTTTTTCCAAATTCCTTCAAAAATGTACCCTAGGAATGACTGA TTTTTCAATTTTGGTGATTTTGCAGCCCTTCCTGGGACTTGTGGGAGTAA AAAGGTACCCTGACCAGAAACACATATCTGTGTCCGTTTTTGCCAAAGTA CCCTCTAACCCTTTTAGATTTATATGCCTAAATTTTTTTAAATTTTTTTT TCTTTCTAGGTTTATATCAGTACAGCAAGCTATCAAAACTATCCAATAGA ATTGGATAACCTGAAGATATTGATGTAGATTCACTGGAGAATTCTTCACT GATTTACGATAGAAGTTATTCTTATCTATGAAAGTAACATTTAATCTAGT CGAGCTTACTTATTGCACATTGAAGAAACAATCCAACTTTTATAAGGATG GCTAGTTTTTATGAAAGTAAATGTATATTATTTCTGTCGTGTTCCTTGTT AAATTCATTTTGGAATGTTTAAGAATATTAAGAGAATTTTTATTTCAAGA TATAAAGCATTTTGTAAACATTCTTTAAAAACGAAAATAGAACAATGCTG TG

Coding sequence (CDS) from alignment at scaffold_36:1348149..1356000-

>TCONS_00061692 ID=TCONS_00061692|Name=TCONS_00061692|organism=Clytia hemisphaerica|type=CDS|length=5535bp|location=Sequence derived from alignment at scaffold_36:1348149..1356000- (Clytia hemisphaerica)
GTTTATATCAGTACAGCAAGCTATCAAAACTATCCAATAGAATTGGATAA
CCTGAAGATATTGATGTAGGTTGGTTACTACATAATCCTTATACAGCCCG
AGCATACATCTACGTCCGATTCTATCCAAATCATATCGACAATTCTGCAC
AATGTGAGCTCCGTCAGAAAACACGTATGACCGTATCCTTTATTTACCGG
CCTGGAGTTGCCAGGCAGAGTGCGAGCTTTAACAGGCTCTATTTGTATGT
CTATTCCTACAAGTTGGAACGAGTTGGATGGCGTTATAAATATATAAAGA
TCGACTCGTATCATACGCTTCCATTTGGTCCGCAAACAAATGCAATTGCA
CACTCTTGGAATCGATTTTCGGTTGATTTCAACATCAAATGTGGCAGATA
TATGTTTATTGTGATTTTTCATCAGTGTGTAAGAATCCCAATGACGAACA
TGTCGTTTTCAGAAAGAAAGATTATAAGTCAAATGTGAATTCCCAATTGG
ATGATTTGGTTGCAAATGAAACCAGCACTTTTGAAAGATCATCACTAAAA
AACACAACTACACCACCATCAGGAAAACAAAGGAATGATTCCAATGCTGA
AGAAAATGAGAGCAATCATATGAACAACACAGTCCATAGAGAATGTACCC
AATCTCACCCTCTGGCGACAACCACTACTCCCGAAACAACTACTGTCGAA
GATACAACAACAGCACTAGACACAAGTACATGGCCGGAAACAACTTATGA
AACATCAACTGTCCCTGAAACATCGACTCTTCCTGAAACAACTACAGAGT
TTATTGAATCCACAACGACCACCCCAAAAACAACGACCACTTCGACAACG
ACAACCACACCAACAACGACAACGACAACGACCACCACACCAACACCAAC
AACGACAACGACAACGACAACGACCACCACCCCAGCAACGACAACGACCA
CCACACCAACAACGACAACAACAATAACGACCACCCCAACTACAAGCACG
ACAACAACCGAAGATCCAAGAACAGTTGTCATAGATGAAGTTCTCATTTG
TTTCATGGTTTCTGCTGCTGGTTATTGTTGTTGTTGAGAGCTCATATGGC
AAATCATGTTTATATCAGTACAGCAAGCTATCAAAACTATCCAATAGAAT
TGGATAACCTGAAGATATTGATGTAGGTTGGTTACTACATAATCCTTATA
CAGCCCGAGCATACATCTACGTCCGATTCTATCCAAATCATATCGACAAT
TCTGCACAATGTGAGCTCCGTCAGAAAACACGTATGACCGTATCCTTTAT
TTACCGGCCTGGAGTTGCCAGGCAGAGTGCGAGCTTTAACAGGCTCTATT
TGTATGTCTATTCCTACAAGTTGGAACGAGTTGGATGGCGTTATAAATAT
ATAAAGATCGACTCGTATCATACGCTTCCATTTGGTCCGCAAACAAATGC
AATTGCACACTCTTGGAATCGATTTTCGGTTGATTTCAACATCAAATGTG
GCAGATATATGTTTATTGTGATTTTTCATCAGTGTGTAAGAATCCCAATG
ACGAACATGTCGTTTTCAGAAAGAAAGATTATAAGTCAAATGTGAATTCC
CAATTGGATGATTTGGTTGCAAATGAAACCAGCACTTTTGAAAGATCATC
ACTAAAAAACACAACTACACCACCATCAGGAAAACAAAGGAATGATTCCA
ATGCTGAAGAAAATGAGAGCAATCATATGAACAACACAGTCCATAGAGAA
TGTACCCAATCTCACCCTCTGGCGACAACCACTACTCCCGAAACAACTAC
TGTCGAAGATACAACAACAGCACTAGACACAAGTACATGGCCGGAAACAA
CTTATGAAACATCAACTGTCCCTGAAACATCGACTCTTCCTGAAACAACT
ACAGAGTTTATTGAATCCACAACGACCACCCCAAAAACAACGACCACTTC
GACAACGACAACCACACCAACAACGACAACGACAACGACCACCACACCAA
CACCAACAACGACAACGACAACGACAACGACCACCACCCCAGCAACGACA
ACGACCACCACACCAACAACGACAACAACAATAACGACCACCCCAACTAC
AAGCACGACAACAACCGAAGATCCAAGAACAGTTGTCATAGATGAAGTTC
TCATTTGTTTCATGGTTTCTGCTGCTGGTTATTGTTGTTGTTGAGAGCTC
ATATGGCAAATCATGTTTATATCAGTACAGCAAGCTATCAAAACTATCCA
ATAGAATTGGATAACCTGAAGATATTGATGTAGGTTGGTTACTACATAAT
CCTTATACAGCCCGAGCATACATCTACGTCCGATTCTATCCAAATCATAT
CGACAATTCTGCACAATGTGAGCTCCGTCAGAAAACACGTATGACCGTAT
CCTTTATTTACCGGCCTGGAGTTGCCAGGCAGAGTGCGAGCTTTAACAGG
CTCTATTTGTATGTCTATTCCTACAAGTTGGAACGAGTTGGATGGCGTTA
TAAATATATAAAGATCGACTCGTATCATACGCTTCCATTTGGTCCGCAAA
CAAATGCAATTGCACACTCTTGGAATCGATTTTCGGTTGATTTCAACATC
AAATGTGGCAGATATATGTTTATTGTGATTTTTCATCAGTGTGTAAGAAT
CCCAATGACGAACATGTCGTTTTCAGAAAGAAAGATTATAAGTCAAATGT
GAATTCCCAATTGGATGATTTGGTTGCAAATGAAACCAGCACTTTTGAAA
GATCATCACTAAAAAACACAACTACACCACCATCAGGAAAACAAAGGAAT
GATTCCAATGCTGAAGAAAATGAGAGCAATCATATGAACAACACAGTCCA
TAGAGAATGTACCCAATCTCACCCTCTGGCGACAACCACTACTCCCGAAA
CAACTACTGTCGAAGATACAACAACAGCACTAGACACAAGTACATGGCCG
GAAACAACTTATGAAACATCAACTGTCCCTGAAACATCGACTCTTCCTGA
AACAACTACAGAGTTTATTGAATCCACAACGACCACCCCAAAAACAACGA
CCACTTCGACAACGACAACCACACCAACAACGACAACGACAACGACCACC
ACACCAACACCAACAACGACAACGACAACGACAACGACCACCACCCCAGC
AACGACAACGACCACCACACCAACAACGACAACAACAATAACGACCACCC
CAACTACAAGCACGACAACAACCGAAGATCCAAGAACAGTTGTCATAGAT
GAAGTTCTCATTTGTTTCATGGTTTCTGCTGCTGGTTATTGTTGTTGTTG
AGAGCTCATATGGCAAATCATGTTTATATCAGTACAGCAAGCTATCAAAA
CTATCCAATAGAATTGGATAACCTGAAGATATTGATGTAGGTTGGTTACT
ACATAATCCTTATACAGCCCGAGCATACATCTACGTCCGATTCTATCCAA
ATCATATCGACAATTCTGCACAATGTGAGCTCCGTCAGAAAACACGTATG
ACCGTATCCTTTATTTACCGGCCTGGAGTTGCCAGGCAGAGTGCGAGCTT
TAACAGGCTCTATTTGTATGTCTATTCCTACAAGTTGGAACGAGTTGGAT
GGCGTTATAAATATATAAAGATCGACTCGTATCATACGCTTCCATTTGGT
CCGCAAACAAATGCAATTGCACACTCTTGGAATCGATTTTCGGTTGATTT
CAACATCAAATGTGGCAGATATATGTTTATTGTGATTTTTCATCAGTGTG
TAAGAATCCCAATGACGAACATGTCGTTTTCAGAAAGAAAGATTATAAGT
CAAATGTGAATTCCCAATTGGATGATTTGGTTGCAAATGAAACCAGCACT
TTTGAAAGATCATCACTAAAAAACACAACTACACCACCATCAGGAAAACA
AAGGAATGATTCCAATGCTGAAGAAAATGAGAGCAATCATATGAACAACA
CAGTCCATAGAGAATGTACCCAATCTCACCCTCTGGCGACAACCACTACT
CCCGAAACAACTACTGTCGAAGATACAACAACAGCACTAGACACAAGTAC
ATGGCCGGAAACAACTTATGAAACATCAACTGTCCCTGAAACATCGACTC
TTCCTGAAACAACTACAGAGTTTATTGAATCCACAACGACCACCCCAAAA
ACAACGACCACTTCGACAACGACAACCACACCAACAACGACAACGACAAC
GACCACCACACCAACACCAACAACGACAACGACAACGACAACGACCACCA
CCCCAGCAACGACAACGACCACCACACCAACAACGACAACAACAATAACG
ACCACCCCAACTACAAGCACGACAACAACCGAAGATCCAAGAACAGTTGT
CATAGATGAAGTTCTCATTTGTTTCATGGTTTCTGCTGCTGGTTATTGTT
GTTGTTGAGAGCTCATATGGCAAATCATGTTTATATCAGTACAGCAAGCT
ATCAAAACTATCCAATAGAATTGGATAACCTGAAGATATTGATGTAGGTT
GGTTACTACATAATCCTTATACAGCCCGAGCATACATCTACGTCCGATTC
TATCCAAATCATATCGACAATTCTGCACAATGTGAGCTCCGTCAGAAAAC
ACGTATGACCGTATCCTTTATTTACCGGCCTGGAGTTGCCAGGCAGAGTG
CGAGCTTTAACAGGCTCTATTTGTATGTCTATTCCTACAAGTTGGAACGA
GTTGGATGGCGTTATAAATATATAAAGATCGACTCGTATCATACGCTTCC
ATTTGGTCCGCAAACAAATGCAATTGCACACTCTTGGAATCGATTTTCGG
TTGATTTCAACATCAAATGTGGCAGATATATGTTTATTGTGATTTTTCAT
CAGTGTGTAAGAATCCCAATGACGAACATGTCGTTTTCAGAAAGAAAGAT
TATAAGTCAAATGTGAATTCCCAATTGGATGATTTGGTTGCAAATGAAAC
CAGCACTTTTGAAAGATCATCACTAAAAAACACAACTACACCACCATCAG
GAAAACAAAGGAATGATTCCAATGCTGAAGAAAATGAGAGCAATCATATG
AACAACACAGTCCATAGAGAATGTACCCAATCTCACCCTCTGGCGACAAC
CACTACTCCCGAAACAACTACTGTCGAAGATACAACAACAGCACTAGACA
CAAGTACATGGCCGGAAACAACTTATGAAACATCAACTGTCCCTGAAACA
TCGACTCTTCCTGAAACAACTACAGAGTTTATTGAATCCACAACGACCAC
CCCAAAAACAACGACCACTTCGACAACGACAACCACACCAACAACGACAA
CGACAACGACCACCACACCAACACCAACAACGACAACGACAACGACAACG
ACCACCACCCCAGCAACGACAACGACCACCACACCAACAACGACAACAAC
AATAACGACCACCCCAACTACAAGCACGACAACAACCGAAGATCCAAGAA
CAGTTGTCATAGATGAAGTTCTCATTTGTTTCATGGTTTCTGCTGCTGGT
TATTGTTGTTGTTGAGAGCTCATATGGCAAATCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038684XLOC_038684Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061692-proteinTCONS_00061692-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061692-exon-scaffold_36-1575043694:1355760..1356000TCONS_00061692-exon-scaffold_36-1575043694:1355760..1356000Clytia hemisphaericaexon
TCONS_00061692-exon-scaffold_36-1575043694:1353565..1354113TCONS_00061692-exon-scaffold_36-1575043694:1353565..1354113Clytia hemisphaericaexon
TCONS_00061692-exon-scaffold_36-1575043694:1350945..1351022TCONS_00061692-exon-scaffold_36-1575043694:1350945..1351022Clytia hemisphaericaexon
TCONS_00061692-exon-scaffold_36-1575043694:1349402..1349739TCONS_00061692-exon-scaffold_36-1575043694:1349402..1349739Clytia hemisphaericaexon
TCONS_00061692-exon-scaffold_36-1575043694:1348149..1348491TCONS_00061692-exon-scaffold_36-1575043694:1348149..1348491Clytia hemisphaericaexon
TCONS_00061692-exon-scaffold_36-1510915933:1355760..1356000TCONS_00061692-exon-scaffold_36-1510915933:1355760..1356000Clytia hemisphaericaexon
TCONS_00061692-exon-scaffold_36-1510915933:1353565..1354113TCONS_00061692-exon-scaffold_36-1510915933:1353565..1354113Clytia hemisphaericaexon
TCONS_00061692-exon-scaffold_36-1510915933:1350945..1351022TCONS_00061692-exon-scaffold_36-1510915933:1350945..1351022Clytia hemisphaericaexon
TCONS_00061692-exon-scaffold_36-1510915933:1349402..1349739TCONS_00061692-exon-scaffold_36-1510915933:1349402..1349739Clytia hemisphaericaexon
TCONS_00061692-exon-scaffold_36-1510915933:1348149..1348491TCONS_00061692-exon-scaffold_36-1510915933:1348149..1348491Clytia hemisphaericaexon
TCONS_00061692-exon-scaffold_36-1491911889:1355760..1356000TCONS_00061692-exon-scaffold_36-1491911889:1355760..1356000Clytia hemisphaericaexon
TCONS_00061692-exon-scaffold_36-1491911889:1353565..1354113TCONS_00061692-exon-scaffold_36-1491911889:1353565..1354113Clytia hemisphaericaexon
TCONS_00061692-exon-scaffold_36-1491911889:1350945..1351022TCONS_00061692-exon-scaffold_36-1491911889:1350945..1351022Clytia hemisphaericaexon
TCONS_00061692-exon-scaffold_36-1491911889:1349402..1349739TCONS_00061692-exon-scaffold_36-1491911889:1349402..1349739Clytia hemisphaericaexon
TCONS_00061692-exon-scaffold_36-1491911889:1348149..1348491TCONS_00061692-exon-scaffold_36-1491911889:1348149..1348491Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:1348149..1356000 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
577.255 578.483 151.656 86.2543 14.3888 10.947 4.22083 4.55696 0.647012 1.76867 0.885181 0.193961 0.0528249 0.0365728 0.0300678 0 0.278255 0.183345 0 0 0.716756 0.786619 166.446 143.265 0.596947 0.55813 8.13204 11.1196 78.5787 93.9814
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061692 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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