TCONS_00061675 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061675
Unique NameTCONS_00061675
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2292

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061675 ID=TCONS_00061675|Name=TCONS_00061675|organism=Clytia hemisphaerica|type=transcript|length=2292bp
CTTTAAAATATGTATAGTGCGATTTTGTATCGTCTTCCAAGAACTCAAGG
TTCGAATtctttcgcggttttttgagaCGCGAGTAGCGAGGTTCAAAATG
TCCGATTAAAAACAAAGATGATCACTGTGTTGACAGTTCCTTGTTGGTAA
TAATTGATGGCTACAGAGAGATTCAAGGATGGACAAAAATAGcaatGGAG
GAGTTAAAGCAGAATGTAACAAAAAAGCAATTGAATATTTACAATCTATA
GATTTCAAAGCACTTGGGAGGACAGTATTTACAGACCATCTTGCAACAGT
GTCAGAAGCTGGAAAGAATATTGGTGAGCTGACGGTCTCAGTGTCAGAAA
CAGTCCGTGGAGATGAAATATGTTATTATGTTCACGCACAAAGCCACGGT
GTATTGGACGGGGTTCCCATGGGAACTTCTGTCACAGCTTACATCACAAG
AGGCGTGGTCACGTTAGAACAAACGCAACACGAGTACATCAAATTCACCA
ATAAACCACTGGACAAGAAAACAATCGTCGTTAAGGAGGGTGACAAACTT
CGAGTAAAAAAAATCACATCAGCAGGGCGGGATGTGTCAGAAAACGAGTT
AACGTACACGCTGAATCACGAGAAAGGTTTCGTCTCAGAAGGTGCAAACA
TCATTCTACAGAGGATAATGTGTCAACGAAATGATGTTCCCGAAAATGCA
AAATTCTTAGCGTTAGATAACGCTTCCTGCTTAACGACGATGAGATATGC
TAAGCTACCAGAGAGGACGACGACTATCGCAGATTCAACGCTTGCACTCT
TCGGTATTGAACGAGAAGTTCTCGGAATGGAAAGTCTTACTGTTCGATgg
aatacacattttttagaAGGCGGTTATATGGCAACTCGAGAGACGATTGG
CTCTTCAGTCCGCATGCAGCTTATCCAATTACCTACTAAAGATGGTCAGC
CAAAAAAGGGCGAAAAATCTGTGTCCGCAAGAAATGATTTACATTGGGAG
GCAGATATGCAAATGACGTCACATTACATCGAAAGAAAGattttatttGG
TTGCAGGAGAAGCTCATTAACGACCATAAAACCTACGTCCGCCATAAACC
CGAACTACGAGCTTTGCTAGAAGACTTCTGTCAATTCGTGTTATTGAGAA
AGCCAGACGACGTCTGTTCATTCGCGTCCGATTATTTCGCTTCCTTCTCA
ACCAAAATAAAACCGCCAACACTACCTTCGAATGCCGAGGAAAAACAACG
ATTGAGTCCTTGAATGTATATTTGTATCTTGTATCAAAAAGTTGGGACAG
TTTTGCATACATCCATCGTGTTCCAGGATTGGTGTTCAATAATTCTCTGG
GTGCACTACACGTCAtggttttaaaagatttttctgaTGTTAAGAAAAAT
TAAGAGGCTAACTAGTATTTTTGGTACatgtttttgtaagaactttCAAA
CGCGAGGCTCAATTTCGTTCAAATTCTTGAGAAAATTGAAAGCAAACTAA
AGCTCAGAACACAGATCTATTCTCTTCAATAAATCATGCAAGCATACTTT
GATAACTGtttttaaatacattttaacctgtaaatgccaagaaagaaatt
aagaaaaattggAAAGTCTCGGATAAACTTTGCTAGTTCTCATGCAGAAA
AGGTGTGTAGTATTGTCAGATGTCTATGGGACTCTAAATACAGCATTAGT
TTAATCTCCCCAtaacattatttttaaaatttgcatatattagacagtca
aaacattttttatatattaaaccGCACCATTTTCAGTTATTGACAGTGGG
AATTAATTGGGAAAAACTTGACTACCTAATAACATGTTCCTGAAAAGCAC
ACACGAGGATAAGGTTTAATATTCAGcataatatttttttcggaaatcaa
CAGTTAGttatactttgaaaaaattaaaaaaagttcctATGTTTTTTATG
CTCAATCTTCATGGAGTTTACAACATATTGGACaaacgaattttgaaaaa
ctgaaaatagttatgtttttgctaaaattactctttccatttttctgaaa
acttgaaatgctggtatccttttctttttatatgacCAAAATGCCTTTCC
ACCAGTCAACTTTTCGATATCATAAGAGAAATATAATAacttaaatagct
ttaataatGATGTAATGAACATTGTAATTTTAATGTTGCTagtgtatata
ttttatttttgtttatgacaaaaaattatcatttgTTCATatatattatt
gaaaaaaaagtttgaaagacaCTACGctaatttgattaaaat
Run BLAST on NCBI

transcript from alignment at scaffold_36:989117..998524-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061675 ID=TCONS_00061675|Name=TCONS_00061675|organism=Clytia hemisphaerica|type=transcript|length=9408bp|location=Sequence derived from alignment at scaffold_36:989117..998524- (Clytia hemisphaerica)
CTTTAAAATATGTATAGTGCGATTTTGTATCGTCTTCCAAGAACTCAAGG
TTCGAATTCTTTCGCGGTTTTTTGAGACGCGAGTAGCGAGGTTCAAAATG
TCCGATTAAAAACAAAGATGATCACTGTGTTGACAGTTCCTTGTTGGTAA
TAATTGATGGCTACAGAGAGATTCAAGGATGGACAAAAATAGGTAAGCAT
TATTTAAAGTCCAGGAATGATGGATCAATTTTTTATGGTCAGTATTGTTT
CTGTTTTGTTTCTTATTNCCCAGGAATGATAGATCAATTTTTTATGTTCA
GTATTGTTTCTGTTTTGTTACTTGATGAGAAGTCTCGTTGAGATGTGACG
ACGGAAAGTTGAAAAAGAAAAAAGTTGTCACCTCAAAAACTGTTGAATTC
CACCCAAAATAATTAGCTGATTACCCCAAGGTGGGTGTAAACTTTAGCTG
GGATTAAAGCTAGAGCTAGCTCACCTGCAAGATTTTAAGATTTAGCAGGG
ACTTGATTTTTCTCATCATTGGGCCATTCCAGAATTTGTCTGTAACAGGA
GGCGGACGACACGGGATTTCCGAGGGCAAAAGTTTTCACCAAAATTCTAA
ATTTCCAAGGCGAGAGAAGAAAATGTATGTATTTCCAAGGCAATTGAATT
AAAAACGGTAAAAAAGAGTGGAATTTCTGACATACTTTGTGAAAGTACAT
ATATAGATTTTTATCGGAATTTCCGACCACCGCTGAAAAAAAAATATTTC
CGAGGCTAGAAAAAAATTTAAAATGTACCGTGAAGTTGGGTAACTTGCAT
CAGTGGAGGCAAACATGCATAATAGCCATCAAATGACTGACCAATCAAAG
CAGCAAAATTTCAAAACAAATGAACTAAGAGCTCTACGCGCAGCTCTACT
CTTACCATTTTTTTTTTTATTTAAGTTTGTATTTTAATGACCAGACAGAT
CATTCATTCGAGGGGTATGCATGTTTGCATCCTCCAATGCAAGTTACCCA
ACTTCACGGTACGTCATCCGACGGGAGTAACAAAAATTTTCTGGAATAGC
CCTTTGTTTTAGTGCAGGAGTTTTTAATTATCTTGAACTTTTTCAAAAAA
AAAGATAAATAGAAAAGTTTTATTTTTACTGCTCTATCCACACACTGAAT
TTGAAAGAATTAAAGATCTTCTAATGTGGCGTTTTTTTGCAAACTTCAAA
AAAATGATTTTTTTCCTGCTTTTGTGGGCTATGCTAAAGTTAAGTGCTTG
CGTGCAGCATTGGGTTTTAAAGTCCAAATATGTGTTTAAATTTTGAGTTA
GGGCTACTGTATACTGCAAATTGATTTCCATTTGGACTTAATCGCGCAGC
CAGACAACACCCGAATTCTCGAAATCTGCACAATTTTATTCCAAAGTAAG
CAAGATCAGAGGGGTTCGTACTACCAACAGGGTGAGAGTATGGGGGTTAC
TTGTTGTTCCAGATCATCTTTCAAATGTGTTTGATGGCTCTATGCTCTAG
AAGGCACAACCCTGCCAACGCACCAGACTTTACGAACATGGGACAATCTC
AATACCAGATTTAGGTCCGGTGCGATCACTGCGCATTATTTTTTTAAACA
AACTTTGTCCTGTGTCCAGAAGTTCGAAAAATTAACACCGGACTGTCCGA
TGGTGCGTCGGCAGGGTTGTAAGAAGGTCAATTTCCGATCGTAAAGCAAA
GCAGGAAAAAAAGAGTGTTTGATGCCCCTCTGATTTCCCGTATGTAGGGA
TCAACTACCTCAAGACAGGAATTTCAGGGTCCTGAGACTCAACTCGCGGT
AAGGCAGTATATATAGACTTAACTCTTCATACAACGCATATTTGGACTTT
GTATCCTATGCTGCACGCAAGTCATTTAAGCTAAAAGTCCTGCAAAAGCA
GGACAAAAATCAGTTTTTTGAAGTTTGCAAAAAAATGCCACATTGAAGAT
TTTTCAAATTCAGTATGTGAATGGTGTGCAAATACATTATTTTGTTGCTC
TCCACTGTTTGGTCTCAGGAGATAAATAAACCTGTTTTTGCCTGTGTTTC
CTAAGGGAAAGTTGGTTTTTTAGCTCTTCTTGAGTCTGCTTGAGTTCTGT
TGAGCAGAAATTTTTGTATGTTCTTTCAACACATGATAATATACCACTAT
GAATTTTTTTTACCAAAAGAAGATCACTATCGAATATTAGAAGCTGAAAA
CCCACTTTCCTTAACCCTTTGCAGGCAAAACGGGTTTTTTTTTACCAAAC
AATCTTATACACAATGGTGGANCCCTAACCCTTTGTGGGCAAAACAGGGT
TTTTTTACCAAACAATTTTATACACAATGGTGGAGTGCACCTTTTTCCGG
GCTATTCATGAGATTGTTGGTTCACGACCTTGTTATCTACTGTGTTTGAT
ATATTAACATATTATACATATTTGACAATAATACCTTAGGTGGATAAATT
TTTTGCATGGACTTTATTTGCAAATTAACCTTTTTTTCACAAAATTACAA
AAATAAATCCTGAGAAAATTTAATCCTAAGGTAGTAGCCAAGTAATGTCT
TTCATTGTTTTATTTTTTTAATTATGAAACTTTAGTATGGTACTAATCTG
ATGGAATAGCCTGAGTTACTGTAAGTTTTTTTGTCTCGTTTTAAATTATA
TTTGGATGTTAAAAAGTTATGGTTACTAAATTTGTTGGACTTTATTGGAC
TCTTTTATTCTATTTTTATTTTTTTATTTTAGCAATGGAGGAGTTAAAGC
AGAATGTAACAAAAAAGCAATTGAATATTTACAATCTATAGGTATAACTA
ACACATAATACTTCATGCCTACTTTTTCTCTGAAATGATTGTGTGTGTTA
AAAACAACTGACACCCCCATAAGGAGAAATTAATTCGATACCGTAGTTGA
TTACAGAGTGAGTATGGTATAATGGTATTATTTTAATATATGTATTTTTA
TGATTTCTCATACTTTCAAAAACGCAATTTTAATTTTTTTACTCTAGATT
TCAAAGCACTTGGGAGGACAGTATTTACAGACCATCTTGCAACAGTGTCA
GAAGCTGGAAAGGTGAGCTAATCTCTACATGTCAATGCAGTATTTGGGTG
GCCCTCTTAAAATCTAGAGACTTTGTATTATTTTGTAACCTTAGAAAAAC
ATTTTATAGTGCTGTTAAAAAAGAACACTTTTAAATAATGTTAACAATGT
AAAGTGGAAAGAAAAAATGTCTAACGGTACTTTAGCTGATAAACATTGTG
GGATATCAGTTGAAACACTTTTAGCGATTTTCGTTTTTTTTTTACTTTAT
TCTCCATTCTTCTATTGTACTGTAACCTTTTACCTAACACTAAATCATGT
TTAAATATCTCCTTTTACGAGAATGATATGTATTTATTACTAAATGACAT
AGGGTTTTAGTAAATAAGTAATGAAAAGCAAAACATCAATGAAACCAGAT
GAAACTTCATTTATTTTGTTTACTCATAGTAGAAAAGCGGTTATTAGAAT
TAATTTTTTTTGCTTAAAATACAATAGAACATGACAATTCTACATTGAAG
GTTATCAGGGGGTTATCATTTACTTTGACAATTCGAGTTCTCAGTTTGGG
AGACTTGTTAAAAGTTATAAGAGTCAATAATAAAGCGATATCCATCACTT
GTCAGTCAAAAATAAACATAATCAAACACTATGTTATTGCTCACAACAGC
TACACATTTTTTATAAGCAACTCCAATTTTTAGGCCACGGCTGGTGTCAC
TTAGCATTTTAGCTCATTTTCTGAAAAGTTTGCTTTCACTACCTCTGATA
TACCATGTTTACACTTATTGGGTCATGAGCTATTGTCTGCCATGGTAATA
TTATCTTTTACTTTATAAGCTTTTACTACTAGGGTAAAAAAAATTGGCTT
ATTTGAGCCCTCAAGCTTCAGCAACCTTATTGCTTATAAAATATGTATAA
GTGTTCTATTTTACATCAATAGTTTGTGATTTTTGTGTTTTGTTTGAAGT
GTTTTGTTTTGATGTCATTAATGACCTCATATTGTACAATGTTGTTTGCT
TTTCTTCTCTTTAAAAAAGGGGGAAATACAATTATATAAGACTAGGGAAA
TGATATTAAACATTAGGTTTTCCTTCTTGTTTTAATAATTTTTTGTGACG
GTAAAAAGAAAAAGTAATATAAACGAATTTGTTGATTTTGTGCTGCCTTT
TTCTTTTAGATGAAACACAACTAGGAAGTTTATCTTATTAATAAGCCTTA
TATTAATCAGAAGCAATCTAAACAGCTAATTTGTTTTTCCTTTTCTTTTG
TTTTATTTTGACAGGAACTGAAAATATTATTTGTCTGTTGTTTATGTCAT
AAATAATCCTAAGATGTAGTATAACTGATTTTAATTAGCTAGATGTTGTA
ATTAATGATACCTGAAGTTTTGTCATTCTCAAGCCTGATGAAATAATTAT
GACATCAGGGAAAATCTGGGTTAATTCTCTCGCTTAATATGCTTTAAAAA
ATTTCAAGGGTCTGACTCACCTCAAAAAGAAAAATTAATCAGCCATTTTA
CTAACTCTGTCAATGTGGCAATTCTAATACACAGGGAGCCTAGTCGATTG
ATCGATCCTACTTTTAAATACCTTGAAATCGACAAAAATATGGACCAAAA
AAGACGCTTTTTGAAAAATAACACATTTTCAAATATTATTTAACGGCGGG
GGCTAGTAAGGGGAGATCAGATGACTTCAGAGAGCCCATTACATGATTTT
AAAATACGTCTAAACTCTTTTTTATGCAGAATATTGGTGAGCTGACGGTC
TCAGTGTCAGAAACAGTCCGTGGAGATGAAATATGTTATTATGTTCACGC
ACAAAGCCACGGTGTATTGGACGGGGTTCCCATGGGAACTTCTGTCACAG
GTTTGTAGTTATTTTGATGAACTTTCAACCAATAAGGTCATAAGGAAAAC
AAAAAGTTATGGTTTAATTCACTAAAAAGTTTTTCATACTCAATACACAA
TATATCTTTAGTGAGTTCTACCACTTTGCTCTGTTTCCACTCTGACGTCA
TTCTGTAGCAAAGAATACATATTTATGTATTATTTCTGTTTAGCTCTCAG
AATATTCTACCCGATCTAATCCGATATATCACCTAAACATAAGACTAAAG
TGACGTTTTGGCTAAAAATTTCCAACCCCAAAGGGAGGGGTTACTGTGTC
TAGCGACCGTAGTGCAGTGGTAGAGCATCCGGCTACGGTTCGCAAGGTTG
TGGGTTCAACCCCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCAGGGAGAAAGAGTGGCGCCCTCCC
CTACCTTTGGGTAGATAGCTATCGAGAGAGGAGCCTTCGGGTCGCCTCCG
AATGCGGTCGCAGACTTACTTACTTACTGTGTCTTATGTTACAACATAAA
TTGATTATTTGTACTTGAGGTATATAGTTAGAGCTTCTATTATGGCCATG
TTTCCTTTGTTGCAGAAATACATTTTCTGTATCTTGTTATCGAATGTAGG
TTAGAAGTAGACCTACCGATTTGCAAAATCTCCTCTTCCCTCAGAGTCGC
CTTTTCAAATTCGAATGTTTTTTTTTTCACAATGACGATTTTTACGTTAA
GTTGAATTTTATACCCACGCCAAACCTTTGAACTATCACATCTCTGTAGC
TTACATCACAAGAGGCGTGGTCACGTTAGAACAAACGCAACACGAGTACA
TCAAATTCACCAATAAACCACTGGACAAGAAAACAATCGTCGTTAAGGAG
GGTGACAAACTTCGAGTAAAAAAAATCACATCAGCAGGGCGGGTAGGTAT
CCTCTCTTAATGTGTCCTTTCTTTTACAAATCTCTAAATCCATTTTATGC
ATCAGTTATTGTCATAATGAGATACTATTTAAAGAAGATAGTTTTATTCG
TGACTCTTGTCTTATCGCTTTCTAACGTTGTTAAATCCCGGCAGTTGCGT
TATCACTTACGATAGGGGGAGTGAAGACCGAACGCAAGACGACTCCTTTT
GACTAATTTTAGCAGCTATATAATGTATTCTCACTTAAGGTCAAAAGCTT
TACCCCTACCTTTGTCTGCATATACTTTCATGATTTATTAATCCATCCTA
TTTATCATCTTTATCAACTATAATTCTTTAATAATGTCTGGACAAACACC
TTTTCATTTTAGGATGTGTCAGAAAACGAGTTAACGTACACGCTGAATCA
CGAGAAAGGTTTCGTCTCAGAAGGTGCAAACATCATTCTACAGAGGATAA
TGTGTCAACGAAATGATGTTCCCGAAAATGCAAAATTCTTAGCGTTAGAT
AACGCTTCCTGCTTAACGACGATGAGATATGTAAGTGAATTGAGGCCAAA
AAATAATTTGAATTACCTAGTGGGACCAAATCGTTCTGAATTAACAGTTT
CTATTATTGAATTGAGCAACTGAGTTAACGAGGGCTCTTTTGTTTTGATG
ATTTATTTTAGCAAAGGCAATTTAGGTGATATAGATCTAGGCCCTTAAGC
TAAGGCTAGCTTTACGCTGATCTGCTTGAAAAACTTATCATGAAGAATGT
CTGCAATTACCAGTCAAAAATTTTTGCAATTTGAAATATATTGCAGCCAG
CCGCCAAAAGAAATCTCATCAGTAAAGTCTTAGTTTTAGACTGTGATTCT
GTCATTGAAAGAGTTCACTTTTTGGTTTGCAGGCTAAGCTACCAGAGAGG
ACGACGACTATCGCAGATTCAACGCTTGCACTCTTCGGTATTGAACGAGA
AGTTCTCGGAATGGAAAGTCTTACTGTTCGATGGAATACACATTTTTTAG
AAGGCGGGTGAGTAGGGTTTATGTATATTTTCTTTGATTTCACTAAATAA
AAAGTATTTTATCAGGACCACCAAATTCTTCCCTTAACTCTGCCCATGTT
TTAATAGCTATGCAAAATGACACTGGGGGTATCAATTCCTGATTTTCGTA
AAAATCAGCTCTTTGGTAACAAATATATATATTCCTATTTTGACTTGTTT
AATTTCAAAGTTATATGGCAACTCGAGAGACGATTGGCTCTTCAGTCCGC
ATGCAGCTTATCCAATTACCTACTAAAGATGGTCAGCCAAAAAAGGGTAA
CGATTCTTGTTTAGCCATTCATCTCTTTTTACGATTTTTTCATGGAAGTT
AACATTTAACGTTTTTGAGAATTTCGAGAAATCCTTTTGTTTATTCTTTT
TTGTCAGCAAGAGGTGCGCCTCTACATCATAAAAACAATCAAACTTGCTC
TTTTATACAAGTTATGTTGCTTGGTTTATATTATCCGGTGGTATACTTTA
CCAAATTATTAAATTAATTGTTGTTCCTTTTTCAGGCGAAAAATCTGTGT
CCGCAAGAAATGATTTACATTGGGAGGCAGATATGCAAATGACGTCACAT
TACATCGAAAGAAAGGTAATAGATGGATAAGGAGGGAATAAAAAGTAGAT
CAGAGAAGAATTATCAGGGGTGGAAAAAGGTGGATTTTTTTAATTCAAAG
GAGCAATAGCAATCTGTATGTAATCTTTTCATTGTCAAGGTGTATTTAAC
CCTTTAACAGGCATTTAACTCTTACTCAGATTTACGTCATTTTCGGGGAA
GATAAAACCTAGAACAAGGTACTAATTCATGATATTCATGACGTAATGTT
TTTTACGGAAATACCCCGGTTTTAACTTTAAACCAGACAAAAGTTGTATA
AAATTTGCCACTACTGGCAAAAACTGAGGTCTTTCCGTATAAAATATTAC
GTCATGAATATCATGAATAGCCATCCATTGACTACCTTAAGTGGATAAAT
TTTGGCGTGGATTTAATTTGGCGATAGATTAATTGCGTAAAATTTGGCGA
TGATTTAATTTGGCGAATTTGAAATTTTGTCACACTGAAATGGGTGAAAA
TTGCTCAAAAATATAATAAAAAGTTGTGATTTTTCACATGATTCTCTTCT
CTTTTTGTTAAATTTGGCGAATTTTGGCGAATTGCCGAATTTGGAAATTT
TGGCGAGGATTTAATTTGGCGAATTTCAGCAAAATTCGTCAAATTTGCCA
AATTTAATCCCCGCCGAAATTTATCCACTTAAGGTACGTCGACATATTTT
TATAGATTTTATTTGGTTGCAGGAGAAGCTCATTAACGACCATAAAACCT
ACGTCCGCCATAAACCCGAACTACGAGCTTTGCTAGAAGACTTCTGTCAA
TTCGTGTTATTGAGAAAGCCAGACGACGTCTGTTCATTCGCGTCCGATTA
TTTCGCTTCCTTCTCAACCAAAATAAAACCGCCAACACTACCTTCGAATG
CCGAGGAAAAACAACGATTGAGTCCTTGAATGTATATTTGTATCTTGTAT
CAAAAAGTTGGGACAGTTTTGCATACATCCATCGTGTTCCAGGATTGGTG
TTCAATAATTCTCTGGGTGCACTACACGTCATGGTTTTAAAAGATTTTTC
TGATGTTAAGAAAAATTAAGAGGCTAACTAGTATTTTTGGTACATGTTTT
TGTAAGAACTTTCAAACGCGAGGCTCAATTTCGTTCAAATTCTTGAGAAA
ATTGAAAGCAAACTAAAGCTCAGAACACAGATCTATTCTCTTCAATAAAT
CATGCAAGCATACTTTGATAACTGTTTTTAAATACATTTTAACCTGTAAA
TGCCAAGAAAGAAATTAAGAAAAATTGGAAAGTCTCGGATAAACTTTGCT
AGTTCTCATGCAGAAAAGGTGTGTAGTATTGTCAGATGTCTATGGGACTC
TAAATACAGCATTAGTTTAATCTCCCCATAACATTATTTTTAAAATTTGC
ATATATTAGACAGTCAAAACATTTTTTATATATTAAACCGCACCATTTTC
AGTTATTGACAGTGGGAATTAATTGGGAAAAACTTGACTACCTAATAACA
TGTTCCTGAAAAGCACACACGAGGATAAGGTTTAATATTCAGCATAATAT
TTTTTTCGGAAATCAACAGTTAGTTATACTTTGAAAAAATTAAAAAAAGT
TCCTATGTTTTTTATGCTCAATCTTCATGGAGTTTACAACATATTGGACA
AACGAATTTTGAAAAACTGAAAATAGTTATGTTTTTGCTAAAATTACTCT
TTCCATTTTTCTGAAAACTTGAAATGCTGGTATCCTTTTCTTTTTATATG
ACCAAAATGCCTTTCCACCAGTCAACTTTTCGATATCATAAGAGAAATAT
AATAACTTAAATAGCTTTAATAATGATGTAATGAACATTGTAATTTTAAT
GTTGCTAGTGTATATATTTTATTTTTGTTTATGACAAAAAATTATCATTT
GTTCATATATATTATTGAAAAAAAAGTTTGAAAGACACTACGCTAATTTG
ATTAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038675XLOC_038675Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061675-exon-scaffold_36-1575043694:998333..998524TCONS_00061675-exon-scaffold_36-1575043694:998333..998524Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1575043694:995734..995792TCONS_00061675-exon-scaffold_36-1575043694:995734..995792Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1575043694:995463..995527TCONS_00061675-exon-scaffold_36-1575043694:995463..995527Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1575043694:993625..993745TCONS_00061675-exon-scaffold_36-1575043694:993625..993745Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1575043694:992683..992825TCONS_00061675-exon-scaffold_36-1575043694:992683..992825Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1575043694:992145..992312TCONS_00061675-exon-scaffold_36-1575043694:992145..992312Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1575043694:991668..991792TCONS_00061675-exon-scaffold_36-1575043694:991668..991792Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1575043694:991379..991464TCONS_00061675-exon-scaffold_36-1575043694:991379..991464Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1575043694:991060..991139TCONS_00061675-exon-scaffold_36-1575043694:991060..991139Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1575043694:989117..990369TCONS_00061675-exon-scaffold_36-1575043694:989117..990369Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1510915933:998333..998524TCONS_00061675-exon-scaffold_36-1510915933:998333..998524Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1510915933:995734..995792TCONS_00061675-exon-scaffold_36-1510915933:995734..995792Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1510915933:995463..995527TCONS_00061675-exon-scaffold_36-1510915933:995463..995527Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1510915933:993625..993745TCONS_00061675-exon-scaffold_36-1510915933:993625..993745Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1510915933:992683..992825TCONS_00061675-exon-scaffold_36-1510915933:992683..992825Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1510915933:992145..992312TCONS_00061675-exon-scaffold_36-1510915933:992145..992312Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1510915933:991668..991792TCONS_00061675-exon-scaffold_36-1510915933:991668..991792Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1510915933:991379..991464TCONS_00061675-exon-scaffold_36-1510915933:991379..991464Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1510915933:991060..991139TCONS_00061675-exon-scaffold_36-1510915933:991060..991139Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1510915933:989117..990369TCONS_00061675-exon-scaffold_36-1510915933:989117..990369Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1491911889:998333..998524TCONS_00061675-exon-scaffold_36-1491911889:998333..998524Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1491911889:995734..995792TCONS_00061675-exon-scaffold_36-1491911889:995734..995792Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1491911889:995463..995527TCONS_00061675-exon-scaffold_36-1491911889:995463..995527Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1491911889:993625..993745TCONS_00061675-exon-scaffold_36-1491911889:993625..993745Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1491911889:992683..992825TCONS_00061675-exon-scaffold_36-1491911889:992683..992825Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1491911889:992145..992312TCONS_00061675-exon-scaffold_36-1491911889:992145..992312Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1491911889:991668..991792TCONS_00061675-exon-scaffold_36-1491911889:991668..991792Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1491911889:991379..991464TCONS_00061675-exon-scaffold_36-1491911889:991379..991464Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1491911889:991060..991139TCONS_00061675-exon-scaffold_36-1491911889:991060..991139Clytia hemisphaericaexon
TCONS_00061675-exon-scaffold_36-1491911889:989117..990369TCONS_00061675-exon-scaffold_36-1491911889:989117..990369Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:989117..998524 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.5167	7.59113	5.0086	3.57747	25.4509	16.606	10.3826	14.208	15.4172	25.8735	11.9204	12.5059	14.9587	10.9815	11.742	11.5322	11.2274	22.4186	14.9611	20.3241	30.032	30.3339	16.7422	15.6908	20.9537	15.6053	29.8718	17.4392	28.6078	25.8715
Blast
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BLAST of TCONS_00061675 vs. Swiss-Prot (Human)
Match: CATIP (Ciliogenesis-associated TTC17-interacting protein OS=Homo sapiens GN=CATIP PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.878e-39
Identity = 85/282 (30.14%), Postives = 148/282 (52.48%), Query Frame = 2 
Query:  209 AECNKKAIEYLQSIDFKALGRTVFTDHLATVSEAGKNIGELTVSVSETVRGDEI-----CYYVHAQSHGVLDGVPMGTSVTAYITRGVVTLEQTQHEYIKFTNKPLDKKTIVVKEGDKLRVKKITSAGRDVSENELTYTLNHEKGFVSEGANIILQRIMCQRNDVPENAKFLALDNASCLTTMRYAKLPERTTTIADSTLALFGIEREVLGMESLTVRWNTHFLEGGYMATRETIGSSVRMQLIQLPTKDGQPKKGEKSVSARNDLHWEADMQMTSHYIERK 1039
             E N +AI++L S+  + L    F++ LA VS+ G+  GELT+ V      +++     C +VHA S G LD +  G S+  Y++  +  +EQ   ++IKF   P+++K  ++K+ D+L V +    G +V     ++  +  KGF+SE AN++L R+M  R  VP NA+FL LD    L  + Y  L  +T  +      +F +E+ V   E + +    + L  G++A R  +GS     + ++P    + +   + V  +  L WE DM++ S +++RK
Sbjct:   26 PEANAEAIDFLSSLHKEELQMLFFSETLAMVSDTGEPQGELTIEVQRGKYQEKLGMLTYCLFVHASSRGFLDKMLCGNSLLGYLSEKLELMEQHSQDFIKFLILPMERKMSLLKQDDQLAVTRSIKEGEEVKTGVTSFPWSSIKGFISEAANLVLLRVMAWRRMVPSNARFLTLDTEGKLCYLTYQNLGFQTIQVDHQQAEVFIVEQTVHAEEGIPMSCQYYLLSDGHLAKRIQVGSPGCCIITKMPILREEDEIEPRPVFEKKPLVWEEDMELYSKFLDRK 307
The following BLAST results are available for this feature:
BLAST of TCONS_00061675 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CATIP1.878e-3930.14Ciliogenesis-associated TTC17-interacting protein ... [more]
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