TCONS_00061636 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061636
Unique NameTCONS_00061636
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length892

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061636 ID=TCONS_00061636|Name=TCONS_00061636|organism=Clytia hemisphaerica|type=transcript|length=892bp
GCAATTTCCTTTTGGTTGTCTTTACACTGATACAAGTTTCACAATCTGAT
AAGGAGGGTTTCCATGAGAACTTCATATGGCCGACAATCGATACAGGGTC
GTGTACACAAGGCACCAAACAGAAGGCCATGTACGGAAGAATGATTTTCG
AGCCTCCACTCAGTGAAAAACCCATGACGTCACTTGCAGTTGATGTTGAA
TGGAATGAATTGCAATTCCATCCGACCGAGAATAAACAAAAGAAGGGCGG
TGTTTATGTGGCGTACACTATGGGCATGAAGGATGGACCGGGCGGTTATT
TTGGTGTTCAGATCAGAGCATCGGGAGGACAATTTATCTTCTCTTTATGG
GATGGCAACCGTCTTGTGGGATCTGGGTCCAACAAACAACCAGTCAAATC
ATCCAGATTAGCATGGCCAGTTGATTTAAACAATTGTGAGAGGAACTGTC
AAGATTGTGGTATTAAACATTTGAAACCATTAATGAAATTGGGATTGACA
ACCGGCACAAAATGTATCATCAAATACCCTGATATGAAGGTTGGAGATCG
GTACAAGATCATGTTACAGCGAGTTGAAAAGGAGATGGAAATAAATACGA
AAGATTTCGGTGGAATGCCAAAAGCCCACAAAGATGAGTTGGACGAAATT
GATAGAGTGGTTAAAGGAAGCTTATGGAACGTCCTAGTCAACGATCCTCA
ACGATTACGAACTATCCTTGTTGGTCAAATGATATTGGAAAGTCCATTAC
CATTCATGGATCGATTGGGTACGTTCGACGAGATGCTTGGGTGTAACAAA
TGCAACGCGATCCATCATAAAGACACTAGATATGGACCCATAGTGGGTGC
AGAAGATGGAAGTTTGAGATTCCCGAAACGTATAGATGCANN
Run BLAST on NCBI

transcript from alignment at scaffold_36:1480080..1498925+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061636 ID=TCONS_00061636|Name=TCONS_00061636|organism=Clytia hemisphaerica|type=transcript|length=18846bp|location=Sequence derived from alignment at scaffold_36:1480080..1498925+ (Clytia hemisphaerica)
GCAATTTCCTTTTGGTTGTCTTTACACTGATACAAGGTAAGTGAAACATT
TTGTTCTGTTTTCACACTCAGTTacttattaccgagtttatgtatgtgtg
tttttctgtgacggagacgataaggttctaatttgactagatcctgacca
gctgaggacgatggtaaatcagcacttttatcATCCTCGTACATGGGTAT
GCGGGATGGCAGTTAGCCATCCTCAAGGATGGCTTCCTCAGGGAAGCCTG
GCGCCCTTGCCCTGCAAAGCCATTATAGATCTATCGATCGTTTAAAAGTT
TTGCTAGACAGACAGTTCCATCATTTCCACTTCTGTTGTGAgagtctctt
tttctttttttttacttcattgTAGTTTTACTGGATTATTTAGGAAACTT
ATTttggattgaaaattttctagagACGActttaatcacttcagtgttga
aaattgtcaAATGCAAAACTACGTGAATATGTTTTTCTCTCTAAAACTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
TGGCTGATCGAGAGCTGTGGAGGGagggttattgtttgtttccgacctag
gtccattcggacctaggtcgaaggatgatgatgatgatcatCCTCGATTT
TGCGAGTTATTCCGAACCGCTTCACTCACTTTCTCACTTTACCGTCTTCA
AAAgggcaaatacataaactcactattAACACAATACCGTAGGATTTCAT
TACTTTCTAATTACCGGGTAANAACTCACTATTAACACAATACCGTAGGA
TTTCATTACTTTCTAATTACCGGGTAAAGATTCCTATCGCATTCCCAGGA
TCTCTCCGCTGTTTTTCTCTGTGCTTACCGGCAAAAGGTTTTTCTTGTGT
AAAAATGCATAGAGAACATGCAACGGCCTTGTGACTGACCGCATGGCAAG
TTGAAGCTACTCTATGTAAGtgtcttttcatgctgcttgAAGATGAAATA
GGAAAGTTACTCTGGGAAAACGGTATCTCTTTGACCGTTTTGTTGGGATA
TACCGGACTTTATGTTTGTTTGTATGTTTTTTACCTTGGAAAGGCTTATA
CGATGACATCATCCCAGCAAATTGCAAACCCTtataactttttacaaaaa
cataCATAAACAGGCATGTTTTATGGTCGAAATGTTATGCTCTTTCCACT
gtcattgaatatttttttatgattcaaaataataaataagtgacattaat
acaataatgaccagtTAGTGAAGGACTGCACTGAACAATATTACCCGAGG
TCCATGCGTTAATCAAGGGCAATGTTTCACAGCGTACAGCCCAAAAAAac
tggtcattattgtatttgttaatcgtttccttcagcttcgatagATTTTT
CGTGCttcattcagaaaaaaatcaaaaaaaaaacaggcgCGAAAAGAGAT
ccaaaattgttttaatttctgacgtcaaaaatgaaaaaatgagacAAATA
ATGTCAAcagtgttcattttcctttgaagaaCTGATTgatcacaatgaat
tttccaaaAGACGGGCAGCTCatgtcatgcgaaaagaaccaattgcgtTA
CGCAAAAAGTCGTGTAGCCTGCTTCataaaagtaaccggttaacagtAGT
AAGGTCTGACCCAACCATTTTTGGTGTGAAATATTTATAGATGAATTCCT
CATTTCTTATAGTTTCACAATCTGATAAGGAGGGTTTCCATGAGAACTTC
ATATGGCCGACAATCGATACAGGGTCGTGTACACAAGGCACCAAACAGAA
GGCCATGTACGGAAGAATGATTTTCGAGCCTCCACTCAGTGAAAAACCCA
TGACGTCACTTGCAGTTGATGTTGAATGGAATGAATTGCAATTCCATCCG
ACCGAGAATAAACAAAAGAAGGGCGGTGTTTATGTGGCGTACACTATGGG
CATGAAGGATGGACCGGGCGGTTATTTTGGTGTTCAGATCAGAGCATCGG
GAGGTATGATTGATTATTTTTGATTgtcttttttttatctcaacCCGATA
TTGGTCCCACAAAAAGTcacattcaaattttgaccgTTAATATCGAAGAA
ATGTAATCGAATAAAATCGATTACTTCAAAGTTACTTttgattcgatttt
ttgaaatattgatatCGATGTTGTGTTGAAACGTGgcaaattttgattaa
tttgataaaaatgaagTGTTTTACTTTTTCGATAAGAACAAATCAAGGTG
AAAAATTAAGTAATTTTGTTCCATAATCGATTGCGCTCATTTACTTGGag
ttagatttttttccagtaATTGAAAAGAGTAATCAAATTCGATTTGATTT
AATgttcgaacacaatcgaatgtCACTATGGAAcagttttcttcaaaatg
taCGGAAATATAAAAGATGTTCGATTGATTGATTAAGAATAGCCTAAAAG
CTTTTTTATTGGTCATCTAAATCTCGATctcgattaaagttcgattacgc
TGATTAAAAGATATCGAATTAATCATTTCGTTCTGTGCTCCATCGATCTT
GATTGAAGcatcaaaaaattatttcacttcaattaaaagtttttggatct
ttctcaagcaaaaatattttgtgtgttttttttttaatcgatCGACATTT
TGCAACTACTTACTAACCCAAACGCCTTACAAGTATGAAGATCCGACACA
CAcacgttgtttcaacgtacaTCTAACACTAGAGCTAATTCATAGTCATA
TGATAGTcacacaaaacaaaaattttccctttttattTTCTCAGAAAGGC
ATACACTGACATGTTCACACGGCCCTTAAAAGaaactattttataagaat
atctttcataaaaataaaatcgaCTGTAGGACTAATGAGATGTAtgaata
cacccccttctcacagacccactgggaaccctccCCACcggaaaattggc
caaaatatcgtccccagtggaaaataatactctaatttttgcccccgctg
aaaataatcagatgagcaaatccccactgcaaaatattgtgctatttttc
catctTCATTGAATCTTTTgactagaaaacaatggaattcaaatccccag
ccataagaaACATAACCTCCAAGCAGCTCTTCGTGCTCCACTCATTCCAC
GCATGCGCTCTAAAGGGAATGGTTCTGCAAGAAGACCTGCGAAGGTTCTC
GGGTTTTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTTTTCCCAGACCCCGCCGAACgcggttttgtaa
aatttcgctggagaaacttttcagatcatcatatgccttagcaatggtga
tcggttatgagattaTAAGAAACATGGAactatcaatccccattgagttc
tGGTCCGTTGTTTCTACCCCCgctggctgataaaatcccaccgggtctgt
gagaagggggtgtatgaATAGGGTTTTACTTAGGcagtcggaaccactac
atagaaaaggcaactattgccttaacgggaaatatttcccgaacgggaag
gtgaaaataacccaaaaaggAAACTGTTCCAGATTGagaatttcatcact
tttctatatcccgttttggtcaagaacttttcattgttcccgaacgggaa
gttgaatttttgtaaacaaagcagatttttgtttcccgatcgagaagaag
tttccaaatagggaagtttttaattgggaattcggaaagtagaattaaga
agcgattacccggtggatttcttaactacccGGTGAAAGGTATTTATTTA
CCCTATTTTACAATAGACATCAGTTATTTACCTTCCACGACCATTTCCGG
AGTGCGCAGAGGTCacattcccgatcgggaaactggTTAACTTGCTAATT
CGGAAACTCTAtccatttcgggaagtttttcaccttcccgttcgggaagt
atttcccgttaaggcaatagttgccatttctatgtagtggttccgactgT
TAGGGAAAATAGTTAATTTAAGTATTAAGTAACCAAGGGCGCTATCCTAA
GTGATCGCGGGGGTCCCAAAATTCTTTATTCTTTAACGCAGAGTATAGTG
TTTGACCTATGGTACCTAGTATGCCCCTAGatttaaattcaaaagaaaaa
attaatgcagTATGGTCGTTATTTCATTTCGTTCTCTCTTGCTTTTCTTG
TTTCGACTTGTAGAAAGATTTTGTCATTAGTTAAGAAGGCTTTTAATGTG
TTTTCGATGATTGGCACTCTATGAAACCATAGGAATTTCATAAAATCTTG
TGGCTTGCCATAACTTGTTGGAGTATCCACATTTAGGAGGATAAGGATGT
ATGCTTAtctgttgaatttttttttcttgtctcGCTATATAAGACTGAAA
TATGAAACCTCAGGAAAAAAATTACGGAGATTccttcttttctttcaaaa
gatgaaATCTTTAGTGAGTTTCAGACCAATTCTTACCATTAGGCAATCAC
ACAGATCACTTTCTCATTGTTGAATCTAGATAGATGAAATCGAATCCAtt
taaattttagcgaatacacgttttttgtgagaacaaactatataagaaca
taaggctttgatgaaCAAAATAGTaataacaagttaagaacaattttaag
gctttgtggactctgaAACGCTCGATTTCAAAGGAATAGGGAcaaaaaat
actcagaaaatggtgaaaatatataagaacacattcaaaactatttttaa
gATTAAAATAAGTCAATAAGCTAAGAACATCGAAAGGCATTTTTATCATA
GAATGTCTTTTTCGAAAGTATTACTAAAGAATGCTTACAatttattgcat
ttttcattcaagaaattcttataaaaactagtcttacAGGAAAGAGTGTG
TCTTTTACAAAGGCTCGGCTTTTTATTAATTCGGCTTTTTAATTTGATTG
CGTCAGCCTTTACCTTTACATAGGGTCATGGTCGGGGTCGAGATGTTATC
GATTGCTGATGTTAGGTTTTATCTTAAATTTCATTCTTTTATTCTCACAA
CAATGATCTTATAGTTAAAATGTTTCCAAGTTCTATGACAACGATGACAA
AATAGTGTATAAGGAAAAATGTGGGATTCCCCCTATCGATACGGTTTTTT
atcgaatttgaaatttgatatcTGTCATCGGCGTTTTTTGGACACCTTAT
TTCATGATTAGACATGTTCCTTTCAACTTATTGTGGATGTTAAAAAACTT
TATATCAAATCATGTGAATATCATAAAAGCACTACTAATCTACAGAGGCG
TACATACTCATAACTTTTTAGAGTCAGATCAATGAAtcaataaaattaaa
acaatttttttaaattaacttttaaaaaaatgaacacAAAAGTATACAGG
CATGGTTATACAGGAGCCAATTATACGAGTATATCTAAGGTTTCAGAACA
TTAAATAATTAAGACGAGTTCATTTGTCAAGCTTCAAACTAAGGTAAGCC
ATTTGCTTTCTTTTGCTTTAATGGACAGCCAGTAACGCAtcctagctggc
acacaacgttttttcgacgtttatctaacgttcataacgtctatataacg
ttagatgaacgttaaaacaacgttgtgtgccagctgggatactATATTTT
GCTGACATCTATTAGTTTGAGTATCTATATGCTTCAAAAGGAAAATATGG
ACAAGAGTATGGGCGTCTACTTGCGCAATTCTGACGGACTTTACTCTTTT
TTATTACAAGAACAATCTTACAAAAACAACGAGGCTCGAAAagccaaaaa
ttaattttagaacAGGCCTGAGCCTGAATGACCCTAGAGAACACCAGATT
TGGAcacaaaaatgctgaaaaaattggggaaaataaaaacatagtaagaa
catttttaggctacgaactcaaaaagttaagaaaatccaaaggctttaaa
aatctttgatgttcttataaaaaaacctgtaTAGCTTTTAGTAATTTAAT
TGAGTATCTCATTTAACTTACCCCTGTATCACTGAAAAGGGCTAAACTTA
ttcaatttcaagaaatttatttagtaaccaaaactaaaaaaatttactGC
TCATCTAACTTAACTCACCTTTGTATCACTGACAGAGAATagttttattc
aattttaatgaatattttctttgattaaCTTGTCTCATTAATCTTAATGT
ATATCTCACTAAATTTACCTCTGTATCACTGAAAAAGATtagtttcattc
aaattttaatgagttttttctttgattaaCATGTCTCATTAATTTGAATG
TGTATCTCACTTAAGTTACCCCTGTTTCACTGAAAGAGATcagttttatt
caaatttaattaatattttctttgattaaCACGTCTAATTAATTTGAATG
TGTATCTCACTTAACTCACCCCTGTATCACTGAAAGAGAAtagtttcatt
caaattttaattaatattttctttgattaaCTTGTCTCATTAATCTTAAT
GTATATCTCACTAAATTTACCTCTGTTTCACTGAAAGACAAtagttttat
tcaaattttaattaatattttctttgattaaCACGTCTAATTAATTTGAA
TGTGTATCTCACTTAACTCACCCCTGTATCACTGAAAGAGAAGAGTTTTA
TTCAAATGctaattaatattttctttgattaaCACGTCTAATTAATTTGA
ATGTGTATCTCACTTAACTCACCCCTGTATCACTGAAAGAGAAtagtttc
attcaaattttaattaatattttctttgattaaCACGTCTAATTAATTTG
AATGTGTATCTCACTTAACTCACCCCTGTATCACTGAAAGAGAAtagttt
cattcaaattttaattaatattttctttgattaaCATGTCTCATTAATTT
GAATGTATATCTCACTAAATTTACCTCTGTATCACTGAAAAAGATtagtt
tcattcaaattttaatgagttttttctttgattaaCATGTCTCATTAATT
TGAATGTGTATCTCACTTAAGTTACCCCTGTTTCACTGAAAGAGATcagt
tttattcaaatttaattaatattttctttgattaaCACGTCTAATTAATT
TGAATGTGTATCTCACTTAACTCACCCCTGTATCACTGAAAGAGAAtagt
ttcattcaaattttaatgagttttttctttgattaaCACGTCTAATTAAT
TTGAATGTGTATCTCACTTAACTCACCCCTGTATCACTGAAAGAGAAtag
tttcattcaaattttaattaatattttctttgattaaCACGTCTAATTAA
TTTGAATGTGTATCTCACTTAACTCACCCCTGTATCACTGAAAGAGAAta
gtttcattcaaattttaattaatattttctttgattaaCACGTCTAATTA
ATTTGAATGTGTATCTCACTTAACTCACCCCTGTATCACTGAAAAAGATt
agtttcattcaaattttaatgatttttttctttgattaacATGTCTCATT
AATTTGAATGTGTATCTCACTTAACTCACCTCTGTATCCCTGAAAGAGAT
aagttttattcaaattttaatgaatattttcttttgattattaCTTCTCA
TTAATTTGAATGTTTATAACACTTCTCACCTCTGTATCATTGAAAGAGag
taattttattaaattttaaggAATATTTCTTTGATTAACACGTCTCATTA
ATTTAAATGTCAGAATGTGTATCTCACTAAACTCAACTCTGTATATGTCT
TTTTAATTTAACAATGTATGTCACTTAGCTTACCCTGTATCACTGAAGGG
TTAATCTCTTTgttctattttgaaatttgcttTCTTTTGATCATCACGTC
CAATTTATTTGTCTATCTCATTTATGTTACCCCTGTATCACTATGTATAA
TGGCATATTTTTCTTGATTAACAAATCTATTTAATTTCTTGTATTTCACT
TAACTTACCTCTGTATCACTGAAAGAGAGTAAATTCATTTAATTATAAGA
AATATATTTCCTTATTAACACGACCAATTAATTCAATTGTTAATTGCATT
AAAGGTTTAATTTTACACAAGAgttcccgtttcataccagacacatattt
catattagtACAGTGTCTGCGTTTTGTTATAATATGCTAATATaagcgaa
aaaatgtttttcttttcctgtttctggccaatcttgctccacatacgtgT
TAACTTGAAAAAGTCGGTGAtgtaaaattgatgagtaagcaaacgatatc
actcttatttaaaaacaaaacctttaaacctACTGATGACTGGAAGAGAT
GCAGTCTCTTTTAATCTAAAGGAGCATCTCTGTTTTACTTACACTCTCAG
ATAATTTCATGGACTTTATTGGGTTTATTTAACGTATGACCTATCATTTT
CTTAAACAGCATTgagtatttttttagaaaagtaaTATTGGTGAGATTCA
ATTTAAGTGATGCTGTTTTTTAATACTGGCTAATTTgcccaaattatttt
tttagttcCATTAACTCTTTCAGTAATTCCCAGATTAATTTTTTCCGTTT
ATGTACGATTTTTTTGGTTGCCACTattgttgttgcaaataaagattaat
tttgaaaagagCTTTACAGCGAACCCAAACATTAACTATTTTGCTTTAGC
CAAAGCCGGGAAAATTGCACTTGAAGCATTAGAGCTTGTAAACTAGTCCA
AAATGTACAAAGAAGCTATTTGAACTTTAAATACGTTACCAGTTAGTATG
GGTGGAATgaattttgattaaatttaactTTGATATTGAcagttttgttt
gtatttttattgTGTCATGTATTTACAACATTTGAAAgaaccctaaaaat
attcaaaataaaaaaaaatatattcaaaactTGCTGACCAACAAAAGACT
TTAATGGATAACTGTTCCCAAAATTCTAAATTTGGATAGAGTTGATTTAA
AAGGCAAGACAATCTTAAAATTTCTCGTAAGTTCTTTAAATATGTTGGCT
CAAAGTTTTTTacaagtcaaaaaaattatttctgaaaGCAAggccaaaac
aaaacaaaggcTAGAACAACGCTGTATTagtatttttcccattttcttca
aaattctcACGAGGGACTATAGGCTTGAGTTTGAAGTTTTCCCTTCCTCT
TTTAAATGGAAAAAGTAATTGATAAACACGTGTACTATGCCATCAAACCT
TACATAATTTTCAGTGTGATGTCTGGTATCTCTCATGTAGATTTTCCAAT
ATTCTGTATAATTAAATTACCTCTTCATGTCTTGTATTGTTTCTTGATAT
AACTGACTGGTAGCTAATACCAAAAGTTTTTACTGGCAACATATTCCAGA
TCCGTAGATTACACACAAAATATCGAGTCTTGTTGATAAAATGGTAATTT
TATAAATGTCTTACTTAACTTAAGTAAGACTGTAAGGCTGTTAATGTTGA
CGAAAACAAATAAAGATACAAGCCTTTAACTTCAGCTTACTTATTTCTTT
CGCCATCTCCTACACTCCAAGGATTCGAATGTTCCATTTTAGACAAGATA
ACACTAAAGCTTAGTCCAATCATGCTCATGATTTTGTGTAAGCCAACAAT
TACCTAATTTATGGTCTGttttgtaccaaatttcataTCTACATTATCCG
CAGTTTGAATTTAGTCAGTCCACTCTTCTCGATGCCGTCGTTGATTGTAA
GCTGTTTTGATGGTTTATGTTGACAATATTATTTTCGTCCATagcattta
aatttaaattggttAAGGAATAGGGTAAAAGAACGTATACGATTTGCCCT
GTTCCTAAACAATGGTTTTGTGAGACTACAttgccttcaaatgttctttg
AAGGTTCCTATTTGTACTGTTTGCATTCGTCGTATTGACAGCATTATCAA
TACCATTATAACCTGAGGAATAACTTGATAATACGTATTCATATTCATcc
atattgataaaaatattattttaaaactaAATTATACCAATGTAACAGCa
ggttttatattttcaaaatggctgaTAAATACTTCGCATAGAACGTAAAC
ACGCTCGCTCCACCTTCCACGTCTCTCCTTCTCTCTAGCATTTAGGCGGC
TCTCCCACGGAGagattttgtttacattgaggaatttgttttttttagag
tTCGTTTGAATTTTACCTGTTCTTTCTTATTGTTTATAGCATTAAggtaa
acttttaattttataaatTGTATAGAAGCAGAAGAGGAAGTGAAACAATA
TGATTTTTAGTAATCGATGAAATTTTTTGAGGTTTAGACGTTTAGTTTCA
AAGATAttacgaaaatataaaaaagtcaaTGTCACTGAACTTTACTAGCT
AACGTTAATAACTAATGGAGAACAATACCTATTTCGAGAAAAAATGAAGG
GACGAAATAATTTGTTCTGTAGATGTAACTTAGGTTCTAGAACATTTGCA
AGGGGGATTTCGCCTTCCCCGCCCTCTCTCGGGTGTGTAATTTCCTAGAC
ATTTTTCCCAGtctcaaaaacaaattatcAGCCACTAATCATTACCAcct
attattatatacctgtaggcaaaaacagccatagAATAATTGGCTATTAT
ACCACAGCagaattgttttcaaattttgctttcaaagtttgatttttttg
tcgctcttgttgttatcaaagaaatccattagaataaatttattttcaat
ttcatgaacaaattttatgactcaaagtaattaagaaaatcaataaaaag
aacattcgaacgttcgattatgtaatagttatcggacagttgcgagtaca
atatgagaaatattttacgagttccgagNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNatttccatattgtacgagcaaatgtct
gataactggtttatcggtgacccaaaaaatgcactttttgtgttggagga
cacttttgtagcaaagtgacgttagattccttctaccgctacaatgcaac
aacatcttttcgtcaatttatatttttgcatgtaaaatacaagatatatt
gtactctttttaaccaatcagattgcagatattttttggatcgccgataa
gaGAGTGTTTTATGTGAAACGTTCGGCAAATGACacaattaatgttttgt
ttttgcctctaggtatatCATAAAACATATTTAATAGGTTTTCGTTAGTT
Attgggccgggggggggggcactcgattttgaaaacgaccgtacgttcgg
ccaaaaatcagatcTCTGaaatcagacccttacagtggaagaaaaatttg
gctgaaaatcgacccttatagtgcaacttttcgaaatttcttggcctttt
cagggcaaaatcttttgaaatttcataaattttacatcaaaataccaccc
ttacagtgcactttttcccacttgctcacaaatcaacccttgcAGTGCAN
taggtcacttacctggagtgccccccccccgggttattggatttattaac
cctcgggGATGTATATTTAACTCGGTTTCGCCTCTgtgaatattacatca
cctcgggttaataaatctcaataaccaacttttacccattgaatatctgc
ttattatcaGTAAAATACAATTAGTGAAATTCTAAACGACGTTGTTAAAA
CTCCAGAGCACTTTCATGattcaatttatttaatttctCATTCACAGGAC
AATTTATCTTCTCTTTATGGGATGGCAACCGTCTTGTGGGATCTGGGTCC
AACAAACAACCAGTCAAATCATCCAGATTAGCATGGCCAGTTGATTTAAA
CAATTGTGAGAGGAACTGTCAAGATTGTGGTATTAAACATTTGAAACCAT
TAATGAAATTGGGATTGACAACCGGCACAAAATGTATCATCAAATACCCT
GATATGAAGGTTAGTAAGAACGTTTTTTCAACGCCCATTGAATATCCTAT
TAAAACGTCATTTGAATGCTGGATGGACNaaggggggggggggtgttttc
caccagccttgcataacttttgatttagaaaagacatggacttgaaattt
agcagaaatgttctctaccataaaaggagttcatggaaaaaatttgggtt
gatgacgtcatcataaaggtgatgacgtcatcacaaactttcacaCTAAT
GGCtgacaaatgaaaaagtactattcaataaaaaagcaattaaagttgaa
cgaatggagatttttcaattctgttttgaatttctaaaaggcaaaataaa
tatctttaacattttTGCCGGTTTTAAACAAActgataaaattgacgttt
aaaatccatgcagaaaatgagtaaattttttNNNNNNNNNNNNNNNNcgt
ttaaaatccatgcagaaaatgagtaaattttttcaaaaaacaatgacgtc
atttttgatgacgtcagcagtttttgaaaattttttaaatatttttaaaa
atttattcttgatatctaaaacctgtcaaaatttgaaggcNcccgggggg
gggggggtactagggttggcaaatgaggggtatgtgcagacgggacctcc
gaaaaccgacccttagagagactgatttttgctgaaaaggtgacccttgg
agagacttttttgaaaaattttcttcgatttttgaaaaaagtggtaCCCT
TAGGGAggcttttttacaattttttcacttgaaatcaaaaaaatttcctg
aaatcgtgaattttccgacccttagagagactaatttaaaattatccgat
ttttccgacccttagagagactttgaagggtgaaaaatccacccttaccg
tccgcacctacccagcacctatttttgcctaagtacccccccccccNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNgcccccccccccctccataAAATTTGAACTCATGA
TGCCCTCTTTTGATGCAGGTAAAATGAACTGTGGGTTGGGTAATGTTAAG
CAGGCTGGAGATCAGAGATTAAGGGTTATTAGTGAAGACATACACGTTTT
atcttttataagagcaaactatatattaacatgaggcttcgatggccaaa
atctaagaacattttaaggctttgcagactctaaaacaaccAATTTAGta
ggaaaatggaccaaaatatttaaaaaaatggggaaattaagaacatgttg
agaacatttttaggcttaaaactcaaaaaattaagaaaatccaaaggctt
caaaatttttgtatgttcttataaaatgaacTAGCTTAGGTGACCAAGAA
AACGTACTCGTATTATTATAGGACCCTTCCGTTAAAACCTCAACGGTCGA
AAGGGGTtcattttcggttttttcaaaactgcatgtacTTCCCCCTCATA
AATATACctatttttgggcttttttgaAGAAGCTTAATTTAGCCGTCATG
AATTTTTCCTGTCAGATGTCCCATAATGCACCAAACTCGAAATATCGGGA
AAATCTCTGAATtccgccattttgatgacgtaattgacagaaaaacttga
ataagttcttgtagaaaaaaaatttcgagcTCAAATTTCGACCAGAGACG
TatacaaataaaacaaattagaaaattggaaaacaaaACCGAAAAAATGC
TTACATCAACAAAAaccatttttgcgaaaaaaagaTGACgttatcaaaaa
atcaaaacaatttcgaTTTGAAATGCTTTTAATCTTTAATTTGAATCTCT
GGTAAAAATTTGAActcgaaatcttttttctacctgaacttattcaagtt
tttctgtcaatgacgtcatcaaaatgatggatttttcaaggattttccca
attttttcgagtttggtgcattatgggacatctgacaggacacattcatg
acggctaaattaagcttctccaaaaaaaaacaaaaaaaggtatgtttatg
aggtggaagtacatgcagttttgaaaaaaaactgaaaaggagCCCCGGTA
CGACCGTTGAGACATTGCCAGATTCAAACCTCAGgttaaaagaaacaaag
aattagTATccttaaagtctgttcacgataagtgtgcactcttttttctt
ttacctataacttttgaaggaattattcaatctttataaatttggtatcg
ttggagagatatttgtgagtggaacaatttgaAAAAAAAAGTCTTTAAAA
AAATTCTAAAAACGAAGATGAAAATGAAGAAGAAAAAAATGAAGATCTTG
TAGAGAAGTGCTAAAACTTTCATTTTAACTGGAGagattctttgatctta
ggaggtcatcactgtgaaaaaatttcactaaaatattttttcaatataaa
gttatgatacaaagttaataagtgattgaccccagaaattagcaaaaaac
agcagaaaacagcgtttttagacgtcaatcagcttagaactttgtttgat
atcttttgactgaatgattatttttgagaatctttttcacagtgatgatg
ttcgataatgaaggagtcacttcagtgaaaatgatagttatagcaccttt
ttacaagatcttcatttttttcttcttcattttcatcttcatttttagaa
ttttgatatggatttttttattccaaattgttccactcgCTAATatcttt
ccaacgataccaaatttataaagattgaagaattccttcaaaagttatag
gtaaatgaaaaaagagtgcacacttatcgtgaatagactttagttgtgaa
tttcCTTGTAACATTATCCCGATTAGGAATAGAGAGGGAGAGATTGCTCt
cgaaacacccccttctcacagacccggtaggattttttcagtgagtgtgg
gtaaaaataacagactcAAACTCAatagggattgatatttccatgttTTT
TGTGGCTGGGGACTtccattcttttgtttttaagtcagaaaattcagtga
ggatggctttatttgattattttaggtggggacaaaaattaaagTATGGT
TTTCCACCGGGACAACATTtattggccaatttttccattggGAAGGGAAc
caagtgggtctgtgagaagggggtgtctcgAAAGCCCAAAAGGCCGGAAA
AAATAGATTTATATTTTCCGATctgaattttgattgaaagcTTAACCACT
GAAGTAACAAGCTCAATTCGAGTAACTAAGACAAGTATGTAAGAAAAGTC
CATACTTGCTATGAACCTCCATTTCAATACTACCTACCAACTTTACCAAA
AAGCTTGATAATGCCTGATTAGACTTGATTAAGCCTTGATCTGAAATATA
gagatgaaattgaaattatccaaatgggcttttccagaaaaataccGTAT
ACtacctgttgaggaggtccatccctctgtggctggaaatgctgtaacct
cCTGGAATTCCAGgtaatttcaggtttaaacccctcttGAATTCGGAATT
TTAGttggatttaaaaagctacccctatggaattccagttatttttgaca
gatttttgtatctccctatggaattccaccACATATCAAAGCTTACCTCC
TTGGAACgaaaatggacctcctcaacatggGTTATACGGTTTTCTTCTGT
AAAAGCCCAACTTATGGatgatttttgctgattttcaagTGTTTACTTAG
GGGATAACCCACCGCATTTTTGTTACTAACGAATAACCTTGATGTAAAAT
GTGAATTGATTTTTTCTAGGTTGGAGATCGGTACAAGATCATGTTACAGC
GAGTTGAAAAGGAGATGGAAATAAATACGAAAGATTTCGGTGGAATGCCA
AAAGCCCACAAAGATGAGTTGGACGAAATTGATAGAGTGGTTAAAGGTGT
GTTTAAGTAACCTATTAACCTCGATTTAGAAAATACTTTCAATATCCGCT
CATATACACCTTTGCGACCATAGCCGTAAATTGCTGTGCGGGCACCTTTT
CGTCCGTGTAaccaccctaaaaccatcccagtctTTTTGTtacacctaaa
gacaatagaaaaaagtgaacAAACAGGATTGgctcgagtttagggtggta
cattaaataataaagtggcacgcgcctgaccgcgtgactacggtcgaaaa
ggtgtattcaccTCACATATAGAAAAGTACTTGAGGTGTTTTTCTGAGTA
CAATCGAACTTGGGAACACCCCTTATCTCAAAGCCCAAAAGgggaaaaaa
aatcctaaaaagcTAAAATTAGGCTACAAAGTGGGGGGGGGGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNgggggggggggggggatttgtaggggttcgaaatac
cgtttccccgtcaaaatctttgctgaatcccggattcccgaaaattgaaa
ataataataacaccgtcacaccggtttgtacaggttcaaatacctgcata
atgacaaaaaataaggccaaataccgtcaccgtctgattttaaaataccg
ttttcctgtcttttttttcgtcaaatcccgtaataccgtactaaaaaagg
gccaatcccgtcacaccgtaaaactACAAACCCCCTACAAAGGGGGAGTT
GTTGATATTGATATTAATCATAAGATCCATGCTGACTGACTAGGACTATC
TTTCTAAAAATTCTAAGAGCTGTAACGCGAGTAAGCTTGTTTTATAAATA
CAATTTCATCTTTTATACAGGAAGCTTATGGAACGTCCTAGTCAACGATC
CTCAACGATTACGAACTATCCTTGTTGGTCAAATGATATTGGAAAGTCCA
TTACCATTCATGGATCGATTGGGTACGTTCGACGAGATGCTTGGGTGTAA
CAAATGCAACGCGATCCATCATAAAGACACTAGATATGGACCCATAGTGG
GTGCAGAAGATGGAAGTTTGAGATTCCCGAAACGTATAGATGCANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038658XLOC_038658Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061636-exon-scaffold_36-1491911889:1480080..1480115TCONS_00061636-exon-scaffold_36-1491911889:1480080..1480115Clytia hemisphaericaexon
TCONS_00061636-exon-scaffold_36-1510915933:1480080..1480115TCONS_00061636-exon-scaffold_36-1510915933:1480080..1480115Clytia hemisphaericaexon
TCONS_00061636-exon-scaffold_36-1575043694:1480080..1480115TCONS_00061636-exon-scaffold_36-1575043694:1480080..1480115Clytia hemisphaericaexon
TCONS_00061636-exon-scaffold_36-1491911889:1482542..1482832TCONS_00061636-exon-scaffold_36-1491911889:1482542..1482832Clytia hemisphaericaexon
TCONS_00061636-exon-scaffold_36-1510915933:1482542..1482832TCONS_00061636-exon-scaffold_36-1510915933:1482542..1482832Clytia hemisphaericaexon
TCONS_00061636-exon-scaffold_36-1575043694:1482542..1482832TCONS_00061636-exon-scaffold_36-1575043694:1482542..1482832Clytia hemisphaericaexon
TCONS_00061636-exon-scaffold_36-1491911889:1493677..1493888TCONS_00061636-exon-scaffold_36-1491911889:1493677..1493888Clytia hemisphaericaexon
TCONS_00061636-exon-scaffold_36-1510915933:1493677..1493888TCONS_00061636-exon-scaffold_36-1510915933:1493677..1493888Clytia hemisphaericaexon
TCONS_00061636-exon-scaffold_36-1575043694:1493677..1493888TCONS_00061636-exon-scaffold_36-1575043694:1493677..1493888Clytia hemisphaericaexon
TCONS_00061636-exon-scaffold_36-1491911889:1497699..1497825TCONS_00061636-exon-scaffold_36-1491911889:1497699..1497825Clytia hemisphaericaexon
TCONS_00061636-exon-scaffold_36-1510915933:1497699..1497825TCONS_00061636-exon-scaffold_36-1510915933:1497699..1497825Clytia hemisphaericaexon
TCONS_00061636-exon-scaffold_36-1575043694:1497699..1497825TCONS_00061636-exon-scaffold_36-1575043694:1497699..1497825Clytia hemisphaericaexon
TCONS_00061636-exon-scaffold_36-1491911889:1498700..1498925TCONS_00061636-exon-scaffold_36-1491911889:1498700..1498925Clytia hemisphaericaexon
TCONS_00061636-exon-scaffold_36-1510915933:1498700..1498925TCONS_00061636-exon-scaffold_36-1510915933:1498700..1498925Clytia hemisphaericaexon
TCONS_00061636-exon-scaffold_36-1575043694:1498700..1498925TCONS_00061636-exon-scaffold_36-1575043694:1498700..1498925Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:1480080..1498925 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2.10894	1.51595	0.594373	0	0	0.528367	0	0	0	0.194233	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061636 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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