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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061623 ID=TCONS_00061623|Name=TCONS_00061623|organism=Clytia hemisphaerica|type=transcript|length=717bp
AAACCTTAGAAAAATTactgtaacattggcaagtcagtgcagaaacaatt
tgtagtcatgtgctacctaaattgtgcagactaccgggctaacTTAATGG
AGCGGCCTGTTTGCTTCTACAAAACTTAGAAANTTCTTTTTGAGGGGAGA
AGAGCAAAGACAAGACGCGATTATAAGataagtattttttttatatgtta
ACTTTACTGaacctacctacctacctacaATCTTACAAATATTGTTTGAG
TNcaatttgtagtcatgtctgctacctaaattgtgcagactaccgggcta
ccttaatggagtaGCTCGTTTGCTTCTGCGTAAAAACCTTGAAtactatt
ttggactttttctgGTAAAAGCCATTTATATTGAAATCAAAgctctttgt
atttttttttcaggaaaagtgAAGCGCAAACCCTGAAGGGAAACGTCATC
TACTTACATCTCTACAAGTCGTCTTCAAAAGGAGACTGATCAACCGAACG
CAAGAAAGAAAGAACTGTTTGCCTGAGATGTCAAGACTAATGGTAGAAGT
TAGGACATGAAAATCGTTTTTATCGTGTGCGGTAGCAAGGTTTTGACGGT
GGAGCCGCTATCCAACAGACAGAGCTGATTACCTGCATGCATGACAATCT
AGCACCGGATCGTCTTCAAAGACACTTGTTGTAAAGATTCTCATTACGAA
AGCTTTAATAATGCAGT Run BLAST on NCBI transcript from alignment at scaffold_36:1164586..1165476+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061623 ID=TCONS_00061623|Name=TCONS_00061623|organism=Clytia hemisphaerica|type=transcript|length=891bp|location=Sequence derived from alignment at scaffold_36:1164586..1165476+ (Clytia hemisphaerica)
AAACCTTAGAAAAATTactgtaacattggcaagtcagtgcagaaacaatt
tgtagtcatgtgctacctaaattgtgcagactaccgggctaacTTAATGG
AGCGGCCTGTTTGCTTCTACAAAACTTAGAAANTTCTTTTTGAGGGGAGA
AGAGCAAAGACAAGACGCGATTATAAGataagtattttttttatatgtta
ACTTTACTGaacctacctacctacctacaATCTTACAAATATTGTTTGAG
TNcaatttgtagtcatgtctgctacctaaattgtgcagactaccgggcta
ccttaatggagtaGCTCGTTTGCTTCTGCGTAAAAACCTTGAAtactatt
ttggactttttctgGTAAAAGCCATTTATATTGAAATCAAAgctctttgt
atttttttttcaggaaaagtgAAGCGCAAACCCTGAAGGGAAACGTCATC
TACTTACATCTCTACAAGTCGTCTTCAAAAGGTAAGAAAACTTCTGAATT
GTTTACCAAGCACCTTACAATATTTGCGTCTTTATCACTCTAAGTACAAA
ATCTGTTCAGAGTCATTTAGCAAACGTAGGTGGAAAGAAGCACTTACTTA
TCTTGGAGCTATGTTGGCTTGTAAGTCTAATATATTCTAATTTCCTTTTC
TACAGGAGACTGATCAACCGAACGCAAGAAAGAAAGAACTGTTTGCCTGA
GATGTCAAGACTAATGGTAGAAGTTAGGACATGAAAATCGTTTTTATCGT
GTGCGGTAGCAAGGTTTTGACGGTGGAGCCGCTATCCAACAGACAGAGCT
GATTACCTGCATGCATGACAATCTAGCACCGGATCGTCTTCAAAGACACT
TGTTGTAAAGATTCTCATTACGAAAGCTTTAATAATGCAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061623-exon-scaffold_36-1491911889:1164586..1165066 | TCONS_00061623-exon-scaffold_36-1491911889:1164586..1165066 | Clytia hemisphaerica | exon |
| TCONS_00061623-exon-scaffold_36-1510915933:1164586..1165066 | TCONS_00061623-exon-scaffold_36-1510915933:1164586..1165066 | Clytia hemisphaerica | exon |
| TCONS_00061623-exon-scaffold_36-1575043694:1164586..1165066 | TCONS_00061623-exon-scaffold_36-1575043694:1164586..1165066 | Clytia hemisphaerica | exon |
| TCONS_00061623-exon-scaffold_36-1491911889:1165241..1165476 | TCONS_00061623-exon-scaffold_36-1491911889:1165241..1165476 | Clytia hemisphaerica | exon |
| TCONS_00061623-exon-scaffold_36-1510915933:1165241..1165476 | TCONS_00061623-exon-scaffold_36-1510915933:1165241..1165476 | Clytia hemisphaerica | exon |
| TCONS_00061623-exon-scaffold_36-1575043694:1165241..1165476 | TCONS_00061623-exon-scaffold_36-1575043694:1165241..1165476 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:1164586..1165476 + |
Blast
The following BLAST results are available for this feature:
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