TCONS_00061609 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061609
Unique NameTCONS_00061609
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2080

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061609 ID=TCONS_00061609|Name=TCONS_00061609|organism=Clytia hemisphaerica|type=transcript|length=2080bp
CACATTGATTAAAAGAACGAAATTTCACTGTATTGTTTAAAATAAGTGAA
CATGTCGTCAGAGTTCAACAAACGTacagacgaaaaaaaaatttgacgtc
aaatattttgaaagcaaaaaaatttatagATTCCGAAATTTGAAATTACA
AGCAGTTTTAGAATTATTATTTCAGTCCGGCAGGTTGTTTATTTAATACT
TTAACAAAATGGAATGTATACCAGACAGGTTATACTTTTGCTTATCAACA
TACATTTTGGAGAACTACCAGGAGAAACCAGGCGATTTGGTGATTAATTT
AGATGAGGTCTATCAACACGCTAAAGTTCGAAAACATTTTGGGCCTCCCT
CCTTGAAGATAGTTTGGAAACATTGTGatgaaatcgattcaaaattgAAG
AAGTTCAAACGGATTATTTTCATTACCAATAACCTCAATGACAATCTTCA
TATCGAGCAGCGAACACTGTCCGCGTTCCTGATGGCCGCTTACGCCATTT
TGCGTTTAGAATGGAACGCTGAGAAAGTGAACACGACACTTCTGTCTGCC
ATTCCAGCACGTCTGGCGTTCTTCAGAGATTATCATGGTGAGAGCTCATA
TAAATTGAACATCATGGATTGTCTACAAGGTATTCATACAGGTTGTATCG
TTAATCGTTGGTTCACCAATCTACAtcaaacaaaatttccaatCTCTACA
AATTCACATCTTGATATGAATTGGATAATTCCTGGCATCTTATTGGCTTT
CAAAGATCCAACATTGAATCGTACTAAAGAAACACGTAGTGTCTCTAAAG
CTTACATTAAAGAACTAAAACGATGTGGGATCAAGGTTATCATTAGGCTT
AATAGCAGCGACCATACAGCCAATTATGAATATTACGGGAAATCATACCA
CCCTTCAGATTTCAAACGTGAACAATTCTACCATTATGATATCCCGTTTC
GGGATGTTGGTACCCCGACCACCGCCCAAGCGCATCAATTCGTCAGCTTA
TGCGAGCGTTACGGTTCAGGTATCGCGGTCCATTGTCACGCAGGTCTTGG
CCGTACGGCAACCATGATCGGATCTTATATGTTGAAACATTTCAACTTCA
ATGCACGTGCTGTGTGTGGATGGCTTAAAGTTTGTCGCCGTGGTTCTGTT
ATGGGTCCACAGCATTTCTTCCTTGACAAGTATCAAGCAGAACTGGAAAA
TATCAAACGGAACATGGTGGTTGAAGGAGAGAAACTAGGCTGTGAAACAC
CGACAAAGCAAGTGTCTCAGCAACCGATCACTGCCGCAATTAAAACTGAA
CTTACACGTTCTCCTCGAAAGAATAACATTATCCATATCGCACCGGTCAA
TCCTCGGCAGTTGATGATCCGCCCAgaacaaacaatgaaaaaatacaAAC
TTGACACAACAAATACACAACCAGAAAAAGCAGAAAATATTCGAAGTAAA
GTTGtcgtttcaaaaacaaaaccaactTCAAGCGAGAAACAAATCGTAGC
CCCTTCACGACCGTATTCTACAAAGCCATGCCTCATTAAATCATCTAAGA
GTATTTTGCATCCTAAACTGACCAAATCAAGAGAGTCAGCTACAGTGATT
GCTGGTGCTAAATCATCAAAAACTCAAGTAACCAGAGAATTAACCAAATC
TGTTCGAAAGTCTGCACGCCATGACGGCCCGCCAGCGCCTCGGTTACGTT
ACACAACAACACCAAATAGAAAATCACAGACCaagatcgaaccagtcaaa
tcTCAACTAAGCGAACTTGGAACCATGTTAAAACAGTATCGAAAGAATGG
CTCTCAAGAAGCAATGGGCCGTAAACAGTCGAGTAAAACTGTTATTCATC
ACGGTGGCAAGCGTGCAACACCACGGTGGCATAATAACATCCCTTCGGAC
GGTTTCATGTCTCAAAATAAAGGTCGAATTTACGGCCTGATCAACACCGT
ctactcaaaacaaaataaaaactaaataaTCTTATCATAAAACTAGGGAC
AATAAAATCTTAATGTATCAATTTGTAAATTATTAATAGAATTCTTCtta
acaaaaaatatataaaaagacaGTAAAATG
Run BLAST on NCBI

protein sequence of TCONS_00061609-protein

>TCONS_00061609-protein ID=TCONS_00061609-protein|Name=TCONS_00061609-protein|organism=Clytia hemisphaerica|type=polypeptide|length=588bp
MECIPDRLYFCLSTYILENYQEKPGDLVINLDEVYQHAKVRKHFGPPSLK
IVWKHCDEIDSKLKKFKRIIFITNNLNDNLHIEQRTLSAFLMAAYAILRL
EWNAEKVNTTLLSAIPARLAFFRDYHGESSYKLNIMDCLQGIHTGCIVNR
WFTNLHQTKFPISTNSHLDMNWIIPGILLAFKDPTLNRTKETRSVSKAYI
KELKRCGIKVIIRLNSSDHTANYEYYGKSYHPSDFKREQFYHYDIPFRDV
GTPTTAQAHQFVSLCERYGSGIAVHCHAGLGRTATMIGSYMLKHFNFNAR
AVCGWLKVCRRGSVMGPQHFFLDKYQAELENIKRNMVVEGEKLGCETPTK
QVSQQPITAAIKTELTRSPRKNNIIHIAPVNPRQLMIRPEQTMKKYKLDT
TNTQPEKAENIRSKVVVSKTKPTSSEKQIVAPSRPYSTKPCLIKSSKSIL
HPKLTKSRESATVIAGAKSSKTQVTRELTKSVRKSARHDGPPAPRLRYTT
TPNRKSQTKIEPVKSQLSELGTMLKQYRKNGSQEAMGRKQSSKTVIHHGG
KRATPRWHNNIPSDGFMSQNKGRIYGLINTVYSKQNKN
Run BLAST on NCBI

transcript from alignment at scaffold_36:986194..989040+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061609 ID=TCONS_00061609|Name=TCONS_00061609|organism=Clytia hemisphaerica|type=transcript|length=2847bp|location=Sequence derived from alignment at scaffold_36:986194..989040+ (Clytia hemisphaerica)
CACATTGATTAAAAGAACGAAATTTCACTGTATTGTTTAAAATAAGTGAA
CATGTCGTCAGAGTTCAACAAACGTacagacgaaaaaaaaatttgacgtc
aaatattttgaaagcaaaaaaatttatagATTCCGAAATTTGAAATTACA
AGCAGTTTTAGAATTATTATTTCAGTCCGGCAGGTTGTTTATTTAATACT
TTAACAAAATGGAATGTATACCAGACAGGTTATACTTTTGCTTATCAACA
TACATTTTGGAGAACTACCAGGAGAAACCAGGCGATTTGGTGATTAATTT
AGATGAGGTCTATCAACACGCTAAAGTTCGAAAACATTTTGGGCCTCCCT
CCTTGAAGATAGTTTGGAAACATTGTGatgaaatcgattcaaaattgAAG
AAGTTCAAACGGATTATTTTCATTACCAATAACCTGTAAGTAAATATTAC
TATAAATGCTGTTAAATACAAATAGTATTTTTCATGCACTTTTTTCTACC
TAGGGGGCTTGGCCATTACATATTGCCTCGTTCCACCCCCGATAGAGCAC
AGCGTGCTTAATAAAGTAATCTTTCAACTTTGAATTTGGTGAATCTGGGA
GTTCTTGTGTTTAAAATCATACTGCAATTTTACGAAATATATCAACCTCA
AAGTATAACCAGGACGGAAATCCCAGTTCTAATTCTTTATACTAGGCAGA
TCGAAACATTCTTCTTCTACACCAGTGACCATATTACTTCCAATTATAAG
TTTTATTTTGCACCGTTTAGtttttacaagtctttcaaaacAACATGTAA
CCGGATCCAATTGTTAAATAACCTTTGCTATTCTTTGTTACAGCAATGAC
AATCTTCATATCGAGCAGCGAACACTGTCCGCGTTCCTGATGGCCGCTTA
CGCCATTTTGCGTTTAGAATGGAACGCTGAGAAAGTGAACACGACACTTC
TGTCTGCCATTCCAGCACGTCTGGCGTTCTTCAGAGATTATCATGGTGAG
AGCTCATATAAATTGAACATCATGGATTGTCTACAAGGTATTCATACAGG
TAAGTCGATAAAAAGAATAGCAAAATGTATTGCAAATTCCAAAGAATCCA
GGCATTTTTGGTCCAATTTACAACCCAATAtgcaaaagtcaaaatattta
aaaccgTTGAAACTTTGAATTTCGGTTGGCTGTTATTTCcttagaaaatg
attttttaactCATTGTCTCATTTGTAACTTCACTTTTCTGACCATAAGA
ATTTTTGCAAGACCTAATTTGTGGGCCCCTCTCAGAAATCTCCAAATCCT
CtctactttcgaaccaatcacaGGCGGTTATGCCCCATCAATGACGCTAC
TGATTCTAAGAATTGTTAAAGACCTGCTAAAAGTAAACATTGCATCTTGA
ATTTCTAGGTTGTATCGTTAATCGTTGGTTCACCAATCTACAtcaaacaa
aatttccaatCTCTACAAATTCACATCTTGATATGAATTGGATAATTCCT
GGCATCTTATTGGCTTTCAAAGATCCAACATTGAATCGTACTAAAGAAAC
ACGTAGTGTCTCTAAAGCTTACATTAAAGAACTAAAACGATGTGGGATCA
AGGTTATCATTAGGCTTAATAGCAGCGACCATACAGCCAATTATGAATAT
TACGGGAAATCATACCACCCTTCAGATTTCAAACGTGAACAATTCTACCA
TTATGATATCCCGTTTCGGGATGTTGGTACCCCGACCACCGCCCAAGCGC
ATCAATTCGTCAGCTTATGCGAGCGTTACGGTTCAGGTATCGCGGTCCAT
TGTCACGCAGGTCTTGGCCGTACGGCAACCATGATCGGATCTTATATGTT
GAAACATTTCAACTTCAATGCACGTGCTGTGTGTGGATGGCTTAAAGTTT
GTCGCCGTGGTTCTGTTATGGGTCCACAGCATTTCTTCCTTGACAAGTAT
CAAGCAGAACTGGAAAATATCAAACGGAACATGGTGGTTGAAGGAGAGAA
ACTAGGCTGTGAAACACCGACAAAGCAAGTGTCTCAGCAACCGATCACTG
CCGCAATTAAAACTGAACTTACACGTTCTCCTCGAAAGAATAACATTATC
CATATCGCACCGGTCAATCCTCGGCAGTTGATGATCCGCCCAgaacaaac
aatgaaaaaatacaAACTTGACACAACAAATACACAACCAGAAAAAGCAG
AAAATATTCGAAGTAAAGTTGtcgtttcaaaaacaaaaccaactTCAAGC
GAGAAACAAATCGTAGCCCCTTCACGACCGTATTCTACAAAGCCATGCCT
CATTAAATCATCTAAGAGTATTTTGCATCCTAAACTGACCAAATCAAGAG
AGTCAGCTACAGTGATTGCTGGTGCTAAATCATCAAAAACTCAAGTAACC
AGAGAATTAACCAAATCTGTTCGAAAGTCTGCACGCCATGACGGCCCGCC
AGCGCCTCGGTTACGTTACACAACAACACCAAATAGAAAATCACAGACCa
agatcgaaccagtcaaatcTCAACTAAGCGAACTTGGAACCATGTTAAAA
CAGTATCGAAAGAATGGCTCTCAAGAAGCAATGGGCCGTAAACAGTCGAG
TAAAACTGTTATTCATCACGGTGGCAAGCGTGCAACACCACGGTGGCATA
ATAACATCCCTTCGGACGGTTTCATGTCTCAAAATAAAGGTCGAATTTAC
GGCCTGATCAACACCGTctactcaaaacaaaataaaaactaaataaTCTT
ATCATAAAACTAGGGACAATAAAATCTTAATGTATCAATTTGTAAATTAT
TAATAGAATTCTTCttaacaaaaaatatataaaaagacaGTAAAATG

Coding sequence (CDS) from alignment at scaffold_36:986194..989040+

>TCONS_00061609 ID=TCONS_00061609|Name=TCONS_00061609|organism=Clytia hemisphaerica|type=CDS|length=5301bp|location=Sequence derived from alignment at scaffold_36:986194..989040+ (Clytia hemisphaerica)
ATGGAATGTATACCAGACAGGTTATACTTTTGCTTATCAACATACATTTT
GGAGAACTACCAGGAGAAACCAGGCGATTTGGTGATTAATTTAGATGAGG
TCTATCAACACGCTAAAGTTCGAAAACATTTTGGGCCTCCCTCCTTGAAG
ATAGTTTGGAAACATTGTGatgaaatcgattcaaaattgAAGAAGTTCAA
ACGGATTATTTTCATTACCAATAACCTCAATGACAATCTTCATATCGAGC
AGCGAACACTGTCCGCGTTCCTGATGGCCGCTTACGCCATTTTGCGTTTA
GAATGGAACGCTGAGAAAGTGAACACGACACTTCTGTCTGCCATTCCAGC
ACGTCTGGCGTTCTTCAGAGATTATCATGGTGAGAGCTCATATAAATTGA
ACATCATGGATTGTCTACAAGGTATTCATACAGGTTGTATCGTTAATCGT
TGGTTCACCAATCTACAtcaaacaaaatttccaatCTCTACAAATTCACA
TCTTGATATGAATTGGATAATTCCTGGCATCTTATTGGCTTTCAAAGATC
CAACATTGAATCGTACTAAAGAAACACGTAGTGTCTCTAAAGCTTACATT
AAAGAACTAAAACGATGTGGGATCAAGGTTATCATTAGGCTTAATAGCAG
CGACCATACAGCCAATTATGAATATTACGGGAAATCATACCACCCTTCAG
ATTTCAAACGTGAACAATTCTACCATTATGATATCCCGTTTCGGGATGTT
GGTACCCCGACCACCGCCCAAGCGCATCAATTCGTCAGCTTATGCGAGCG
TTACGGTTCAGGTATCGCGGTCCATTGTCACGCAGGTCTTGGCCGTACGG
CAACCATGATCGGATCTTATATGTTGAAACATTTCAACTTCAATGCACGT
GCTGTGTGTGGATGGCTTAAAGTTTGTCGCCGTGGTTCTGTTATGGGTCC
ACAGCATTTCTTCCTTGACAAGTATCAAGCAGAACTGGAAAATATCAAAC
GGAACATGGTGGTTGAAGGAGAGAAACTAGGCTGTGAAACACCGACAAAG
CAAGTGTCTCAGCAACCGATCACTGCCGCAATTAAAACTGAACTTACACG
TTCTCCTCGAAAGAATAACATTATCCATATCGCACCGGTCAATCCTCGGC
AGTTGATGATCCGCCCAgaacaaacaatgaaaaaatacaAACTTGACACA
ACAAATACACAACCAGAAAAAGCAGAAAATATTCGAAGTAAAGTTGtcgt
ttcaaaaacaaaaccaactTCAAGCGAGAAACAAATCGTAGCCCCTTCAC
GACCGTATTCTACAAAGCCATGCCTCATTAAATCATCTAAGAGTATTTTG
CATCCTAAACTGACCAAATCAAGAGAGTCAGCTACAGTGATTGCTGGTGC
TAAATCATCAAAAACTCAAGTAACCAGAGAATTAACCAAATCTGTTCGAA
AGTCTGCACGCCATGACGGCCCGCCAGCGCCTCGGTTACGTTACACAACA
ACACCAAATAGAAAATCACAGACCaagatcgaaccagtcaaatcTCAACT
AAGCGAACTTGGAACCATGTTAAAACAGTATCGAAAGAATGGCTCTCAAG
AAGCAATGGGCCGTAAACAGTCGAGTAAAACTGTTATTCATCACGGTGGC
AAGCGTGCAACACCACGGTGGCATAATAACATCCCTTCGGACGGTTTCAT
GTCTCAAAATAAAGGTCGAATTTACGGCCTGATCAACACCGTctactcaa
aacaaaataaaaactaaATGGAATGTATACCAGACAGGTTATACTTTTGC
TTATCAACATACATTTTGGAGAACTACCAGGAGAAACCAGGCGATTTGGT
GATTAATTTAGATGAGGTCTATCAACACGCTAAAGTTCGAAAACATTTTG
GGCCTCCCTCCTTGAAGATAGTTTGGAAACATTGTGatgaaatcgattca
aaattgAAGAAGTTCAAACGGATTATTTTCATTACCAATAACCTCAATGA
CAATCTTCATATCGAGCAGCGAACACTGTCCGCGTTCCTGATGGCCGCTT
ACGCCATTTTGCGTTTAGAATGGAACGCTGAGAAAGTGAACACGACACTT
CTGTCTGCCATTCCAGCACGTCTGGCGTTCTTCAGAGATTATCATGGTGA
GAGCTCATATAAATTGAACATCATGGATTGTCTACAAGGTATTCATACAG
GTTGTATCGTTAATCGTTGGTTCACCAATCTACAtcaaacaaaatttcca
atCTCTACAAATTCACATCTTGATATGAATTGGATAATTCCTGGCATCTT
ATTGGCTTTCAAAGATCCAACATTGAATCGTACTAAAGAAACACGTAGTG
TCTCTAAAGCTTACATTAAAGAACTAAAACGATGTGGGATCAAGGTTATC
ATTAGGCTTAATAGCAGCGACCATACAGCCAATTATGAATATTACGGGAA
ATCATACCACCCTTCAGATTTCAAACGTGAACAATTCTACCATTATGATA
TCCCGTTTCGGGATGTTGGTACCCCGACCACCGCCCAAGCGCATCAATTC
GTCAGCTTATGCGAGCGTTACGGTTCAGGTATCGCGGTCCATTGTCACGC
AGGTCTTGGCCGTACGGCAACCATGATCGGATCTTATATGTTGAAACATT
TCAACTTCAATGCACGTGCTGTGTGTGGATGGCTTAAAGTTTGTCGCCGT
GGTTCTGTTATGGGTCCACAGCATTTCTTCCTTGACAAGTATCAAGCAGA
ACTGGAAAATATCAAACGGAACATGGTGGTTGAAGGAGAGAAACTAGGCT
GTGAAACACCGACAAAGCAAGTGTCTCAGCAACCGATCACTGCCGCAATT
AAAACTGAACTTACACGTTCTCCTCGAAAGAATAACATTATCCATATCGC
ACCGGTCAATCCTCGGCAGTTGATGATCCGCCCAgaacaaacaatgaaaa
aatacaAACTTGACACAACAAATACACAACCAGAAAAAGCAGAAAATATT
CGAAGTAAAGTTGtcgtttcaaaaacaaaaccaactTCAAGCGAGAAACA
AATCGTAGCCCCTTCACGACCGTATTCTACAAAGCCATGCCTCATTAAAT
CATCTAAGAGTATTTTGCATCCTAAACTGACCAAATCAAGAGAGTCAGCT
ACAGTGATTGCTGGTGCTAAATCATCAAAAACTCAAGTAACCAGAGAATT
AACCAAATCTGTTCGAAAGTCTGCACGCCATGACGGCCCGCCAGCGCCTC
GGTTACGTTACACAACAACACCAAATAGAAAATCACAGACCaagatcgaa
ccagtcaaatcTCAACTAAGCGAACTTGGAACCATGTTAAAACAGTATCG
AAAGAATGGCTCTCAAGAAGCAATGGGCCGTAAACAGTCGAGTAAAACTG
TTATTCATCACGGTGGCAAGCGTGCAACACCACGGTGGCATAATAACATC
CCTTCGGACGGTTTCATGTCTCAAAATAAAGGTCGAATTTACGGCCTGAT
CAACACCGTctactcaaaacaaaataaaaactaaATGGAATGTATACCAG
ACAGGTTATACTTTTGCTTATCAACATACATTTTGGAGAACTACCAGGAG
AAACCAGGCGATTTGGTGATTAATTTAGATGAGGTCTATCAACACGCTAA
AGTTCGAAAACATTTTGGGCCTCCCTCCTTGAAGATAGTTTGGAAACATT
GTGatgaaatcgattcaaaattgAAGAAGTTCAAACGGATTATTTTCATT
ACCAATAACCTCAATGACAATCTTCATATCGAGCAGCGAACACTGTCCGC
GTTCCTGATGGCCGCTTACGCCATTTTGCGTTTAGAATGGAACGCTGAGA
AAGTGAACACGACACTTCTGTCTGCCATTCCAGCACGTCTGGCGTTCTTC
AGAGATTATCATGGTGAGAGCTCATATAAATTGAACATCATGGATTGTCT
ACAAGGTATTCATACAGGTTGTATCGTTAATCGTTGGTTCACCAATCTAC
AtcaaacaaaatttccaatCTCTACAAATTCACATCTTGATATGAATTGG
ATAATTCCTGGCATCTTATTGGCTTTCAAAGATCCAACATTGAATCGTAC
TAAAGAAACACGTAGTGTCTCTAAAGCTTACATTAAAGAACTAAAACGAT
GTGGGATCAAGGTTATCATTAGGCTTAATAGCAGCGACCATACAGCCAAT
TATGAATATTACGGGAAATCATACCACCCTTCAGATTTCAAACGTGAACA
ATTCTACCATTATGATATCCCGTTTCGGGATGTTGGTACCCCGACCACCG
CCCAAGCGCATCAATTCGTCAGCTTATGCGAGCGTTACGGTTCAGGTATC
GCGGTCCATTGTCACGCAGGTCTTGGCCGTACGGCAACCATGATCGGATC
TTATATGTTGAAACATTTCAACTTCAATGCACGTGCTGTGTGTGGATGGC
TTAAAGTTTGTCGCCGTGGTTCTGTTATGGGTCCACAGCATTTCTTCCTT
GACAAGTATCAAGCAGAACTGGAAAATATCAAACGGAACATGGTGGTTGA
AGGAGAGAAACTAGGCTGTGAAACACCGACAAAGCAAGTGTCTCAGCAAC
CGATCACTGCCGCAATTAAAACTGAACTTACACGTTCTCCTCGAAAGAAT
AACATTATCCATATCGCACCGGTCAATCCTCGGCAGTTGATGATCCGCCC
AgaacaaacaatgaaaaaatacaAACTTGACACAACAAATACACAACCAG
AAAAAGCAGAAAATATTCGAAGTAAAGTTGtcgtttcaaaaacaaaacca
actTCAAGCGAGAAACAAATCGTAGCCCCTTCACGACCGTATTCTACAAA
GCCATGCCTCATTAAATCATCTAAGAGTATTTTGCATCCTAAACTGACCA
AATCAAGAGAGTCAGCTACAGTGATTGCTGGTGCTAAATCATCAAAAACT
CAAGTAACCAGAGAATTAACCAAATCTGTTCGAAAGTCTGCACGCCATGA
CGGCCCGCCAGCGCCTCGGTTACGTTACACAACAACACCAAATAGAAAAT
CACAGACCaagatcgaaccagtcaaatcTCAACTAAGCGAACTTGGAACC
ATGTTAAAACAGTATCGAAAGAATGGCTCTCAAGAAGCAATGGGCCGTAA
ACAGTCGAGTAAAACTGTTATTCATCACGGTGGCAAGCGTGCAACACCAC
GGTGGCATAATAACATCCCTTCGGACGGTTTCATGTCTCAAAATAAAGGT
CGAATTTACGGCCTGATCAACACCGTctactcaaaacaaaataaaaacta
a
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038646XLOC_038646Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061609-proteinTCONS_00061609-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061609-exon-scaffold_36-1491911889:986194..986628TCONS_00061609-exon-scaffold_36-1491911889:986194..986628Clytia hemisphaericaexon
TCONS_00061609-exon-scaffold_36-1510915933:986194..986628TCONS_00061609-exon-scaffold_36-1510915933:986194..986628Clytia hemisphaericaexon
TCONS_00061609-exon-scaffold_36-1575043694:986194..986628TCONS_00061609-exon-scaffold_36-1575043694:986194..986628Clytia hemisphaericaexon
TCONS_00061609-exon-scaffold_36-1491911889:987037..987242TCONS_00061609-exon-scaffold_36-1491911889:987037..987242Clytia hemisphaericaexon
TCONS_00061609-exon-scaffold_36-1510915933:987037..987242TCONS_00061609-exon-scaffold_36-1510915933:987037..987242Clytia hemisphaericaexon
TCONS_00061609-exon-scaffold_36-1575043694:987037..987242TCONS_00061609-exon-scaffold_36-1575043694:987037..987242Clytia hemisphaericaexon
TCONS_00061609-exon-scaffold_36-1491911889:987602..989040TCONS_00061609-exon-scaffold_36-1491911889:987602..989040Clytia hemisphaericaexon
TCONS_00061609-exon-scaffold_36-1510915933:987602..989040TCONS_00061609-exon-scaffold_36-1510915933:987602..989040Clytia hemisphaericaexon
TCONS_00061609-exon-scaffold_36-1575043694:987602..989040TCONS_00061609-exon-scaffold_36-1575043694:987602..989040Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:986194..989040 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0568857	0.0228824	0.0429393	0	0.869421	0.624806	0.17065	0.182583	0.370534	0.809353	0.172899	0.884446	0.277441	0.340512	0.0492016	0.0231097	0.0996425	0.175081	0.564394	0.340542	0.923884	1.53067	0.039076	0.0592982	0.356685	0.635934	0.104002	0.055497	0.0631387	0.128657
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003595Tyr_Pase_cat
IPR029260DSPn
IPR029021Prot-tyrosine_phosphatase-like
IPR000340Dual-sp_phosphatase_cat-dom
IPR016130Tyr_Pase_AS
IPR000387TYR_PHOSPHATASE_dom
Vocabulary: Biological Process
TermDefinition
GO:0016311dephosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0008138protein tyrosine/serine/threonine phosphatase activity
GO:0004725protein tyrosine phosphatase activity
GO:0016791phosphatase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016311 dephosphorylation
molecular_function GO:0016791 phosphatase activity
molecular_function GO:0004725 protein tyrosine phosphatase activity
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
Blast
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BLAST of TCONS_00061609 vs. Swiss-Prot (Human)
Match: CC14A (Dual specificity protein phosphatase CDC14A OS=Homo sapiens GN=CDC14A PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 3.611e-47
Identity = 112/346 (32.37%), Postives = 165/346 (47.69%), Query Frame = 2 
Query:  212 ECIPDRLYFCLSTYILENYQEKPGDLV----INLDEVYQHAKVRKHFGPPSLKIVWKHCDEIDSKLKKF----KRIIFITNNLNDNLHIEQRTLSAFLMAAYAILRLEWNAEKVNTTLLSAI-PARLAFFRDYHGESSYKLNIMDCLQGIHTGCIVNRWFTNLHQTKFPISTNSHL------DMNWIIPGILLAFKDPTLNRTKETR---SVSKAYIKELKRCGIKVIIRLNSSDHTANYEYYGKSYHPSDFKREQFYHYDIPFRDVGTPTTAQAHQFVSLCERYGSGIAVHCHAGLGRTATMIGSYMLKHFNFNARAVCGWLKVCRRGSVMGPQHFFLDKYQAEL 1195
            E + DRLYF          + +P   V     ++DE   +      FGP +L +V+++C +++ KLK +    K+I+  T          +R  +AFL+ AYA++ L+   E+    LLS   P  L F     G  +Y L I+DCLQGI  G  +   F +     F +    H       D NWI+PG  LAF  P      E        +AY    K+  +  ++RLN            K Y    F    F HYD+ F D  TP+     +F+++CE     IAVHC AGLGRT T+I  Y++KH+ F    +  W+++CR GS++GPQ  FL++ QA L
Sbjct:   13 EFMKDRLYFA-------TLRNRPKSTVNTHYFSIDEELVYENFYADFGPLNLAMVYRYCCKLNKKLKSYSLSRKKIVHYTC-----FDQRKRANAAFLIGAYAVIYLKKTPEEAYRALLSGSNPPYLPFRDASFGNCTYNLTILDCLQGIRKG--LQHGFFDFET--FDVDEYEHYERVENGDFNWIVPGKFLAFSGPHPKSKIENGYPLHAPEAYFPYFKKHNVTAVVRLNK-----------KIYEAKRFTDAGFEHYDLFFIDGSTPSDNIVRRFLNICENTEGAIAVHCKAGLGRTGTLIACYVMKHYRFTHAEIIAWIRICRPGSIIGPQQHFLEEKQASL 331
The following BLAST results are available for this feature:
BLAST of TCONS_00061609 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CC14A3.611e-4732.37Dual specificity protein phosphatase CDC14A OS=Hom... [more]
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