|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061608 ID=TCONS_00061608|Name=TCONS_00061608|organism=Clytia hemisphaerica|type=transcript|length=1039bp
CACATTGATTAAAAGAACGAAATTTCACTGTATTGTTTAAAATAAGTGAA
CATGTCGTCAGAGTTCAACAAACGTacagacgaaaaaaaaatttgacgtc
aaatattttgaaagcaaaaaaatttatagATTCCGAAATTTGAAATTACA
AGCAGTTTTAGAATTATTATTTCAGTCCGGCAGGTTGTTTATTTAATACT
TTAACAAAATGGAATGTATACCAGACAGGTTATACTTTTGCTTATCAACA
TACATTTTGGAGAACTACCAGGAGAAACCAGGCGATTTGGTGATTAATTT
AGATGAGGTCTATCAACACGCTAAAGTTCGAAAACATTTTGGGCCTCCCT
CCTTGAAGATAGTTTGGAAACATTGTGatgaaatcgattcaaaattgAAG
AAGTTCAAACGGATTATTTTCATTACCAATAACCTGTAAGTAAATATTAC
TATAAATGCTGTTAAATACAAATAGTATTTTTCATGCACTTTTTTCTACC
TAGGGGGCTTGGCCATTACATATTGCCTCGTTCCACCCCCGATAGAGCAC
AGCGTGCTTAATAAAGTAATCTTTCAACTTTGAATTTGGTGAATCTGGGA
GTTCTTGTGTTTAAAATCATACTGCAATTTTACGAAATATATCAACCTCA
AAGTATAACCAGGACGGAAATCCCAGTTCTAATTCTTTATACTAGGCAGA
TCGAAACATTCTTCTTCTACACCAGTGACCATATTACTTCCAATTATAAG
TTTTATTTTGCACCGTTTAGtttttacaagtctttcaaaacAACATGTAA
CCGGATCCAATTGTTAAATAACCTTTGCTATTCTTTGTTACAGCAATGAC
AATCTTCATATCGAGCAGCGAACACTGTCCGCGTTCCTGATGGCCGCTTA
CGCCATTTTGCGTTTAGAATGGAACGCTGAGAAAGTGAACACGACACTTC
TGTCTGCCATTCCAGCACGTCTGGCGTTCTTCAGAGATTATCATGGTGAG
AGCTCATATAAATTGAACATCATGGATTGTCTACAAGGT Run BLAST on NCBI transcript from alignment at scaffold_36:986194..987232+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061608 ID=TCONS_00061608|Name=TCONS_00061608|organism=Clytia hemisphaerica|type=transcript|length=1039bp|location=Sequence derived from alignment at scaffold_36:986194..987232+ (Clytia hemisphaerica)
CACATTGATTAAAAGAACGAAATTTCACTGTATTGTTTAAAATAAGTGAA
CATGTCGTCAGAGTTCAACAAACGTacagacgaaaaaaaaatttgacgtc
aaatattttgaaagcaaaaaaatttatagATTCCGAAATTTGAAATTACA
AGCAGTTTTAGAATTATTATTTCAGTCCGGCAGGTTGTTTATTTAATACT
TTAACAAAATGGAATGTATACCAGACAGGTTATACTTTTGCTTATCAACA
TACATTTTGGAGAACTACCAGGAGAAACCAGGCGATTTGGTGATTAATTT
AGATGAGGTCTATCAACACGCTAAAGTTCGAAAACATTTTGGGCCTCCCT
CCTTGAAGATAGTTTGGAAACATTGTGatgaaatcgattcaaaattgAAG
AAGTTCAAACGGATTATTTTCATTACCAATAACCTGTAAGTAAATATTAC
TATAAATGCTGTTAAATACAAATAGTATTTTTCATGCACTTTTTTCTACC
TAGGGGGCTTGGCCATTACATATTGCCTCGTTCCACCCCCGATAGAGCAC
AGCGTGCTTAATAAAGTAATCTTTCAACTTTGAATTTGGTGAATCTGGGA
GTTCTTGTGTTTAAAATCATACTGCAATTTTACGAAATATATCAACCTCA
AAGTATAACCAGGACGGAAATCCCAGTTCTAATTCTTTATACTAGGCAGA
TCGAAACATTCTTCTTCTACACCAGTGACCATATTACTTCCAATTATAAG
TTTTATTTTGCACCGTTTAGtttttacaagtctttcaaaacAACATGTAA
CCGGATCCAATTGTTAAATAACCTTTGCTATTCTTTGTTACAGCAATGAC
AATCTTCATATCGAGCAGCGAACACTGTCCGCGTTCCTGATGGCCGCTTA
CGCCATTTTGCGTTTAGAATGGAACGCTGAGAAAGTGAACACGACACTTC
TGTCTGCCATTCCAGCACGTCTGGCGTTCTTCAGAGATTATCATGGTGAG
AGCTCATATAAATTGAACATCATGGATTGTCTACAAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061608-exon-scaffold_36-1491911889:986194..987232 | TCONS_00061608-exon-scaffold_36-1491911889:986194..987232 | Clytia hemisphaerica | exon |
| TCONS_00061608-exon-scaffold_36-1510915933:986194..987232 | TCONS_00061608-exon-scaffold_36-1510915933:986194..987232 | Clytia hemisphaerica | exon |
| TCONS_00061608-exon-scaffold_36-1575043694:986194..987232 | TCONS_00061608-exon-scaffold_36-1575043694:986194..987232 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:986194..987232 + |
Blast
The following BLAST results are available for this feature:
|
