TCONS_00061594 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061594
Unique NameTCONS_00061594
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2177

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061594 ID=TCONS_00061594|Name=TCONS_00061594|organism=Clytia hemisphaerica|type=transcript|length=2177bp
TTTTAAGATCATTTGAATACAAAAATTTCAActgatttttaggattttac
tttacaaaaagaattaggATGGAACCTTCAAGGATATCCTTCTTGATGAA
AAACGCATTCACGTTATGATTTTGTTCCAGTTAAAGACACTTTGTTGGTT
CAATTGAAAACTTAATTTAAGAGTGGCAAAACTCTTCTTTTAACTTGATT
AATTCCTGGTTGTAACACATGCGATCAAACCATTAAACATTGAAACAAAT
TGACAATACCCAGTATATTCACCAACACCTTCAATCATGCCAATCCGGCT
AAAACGTAATCGAGTTATAATTACATCCGTCATTTGTATATTATTGGTCC
TACTCATAATGGAGTCAAGAacattaaagaaaaataatcagCTTGataca
acaaacaacaatcatgAAATATCTCGCCTCGGCCGATCTCTTATGAGATA
CGCAACTTTTGATGCCAGTCCCGAAATGCGGCGAACACAACCCGGTTTTA
TGGGACGTGGTGTCAAAGTATTAcctaatgaaaaagaaaaagaagctgAA
GGATATAAAAGTCATTCTTTCAATCAACTAGCAAGTGATAAAATTTCTTT
AGAACGTGTTTTACCGGATTATCGGAATCAATTATGTCGCTCGAAGAAAT
ATCCAACCAAGCTACCGAGTACCTCAGTTATCATCTGTTTCCATAACGAA
GCGTGGTCGACATTGTTAAGGACCGTTCACAGTGTCATCAATCGAACACC
ACCTgattatttgaaagaaattgtaTTGGTTGATGATGCAAGTACCAGGG
ACGATTTGAAGCAAGCCTTAGAAGACTACATCATAAACCTACCCAAAGTC
AACATCGTCCGTTTAAAGAAAAGAGAAGGATTGATACGAGCTCGGCTAGA
AGGAGCAAAAGTTTCCAAAGGAGAAGTTCTAACATTCTTAGACGCTCACT
GCGAATGTACATTAGGGTGGATTGAACCTTTATTGGCTAAAATTAAAGAG
AAGAAATCAAATGTTGTGATGCCTGTTATAGACGAAATAAGTGAAACAGA
TTTTCATTATAATGCTGTACCGGAGCCTTTCCAGAGAGGTGTTTTTAAAT
GGAGATTGGAATTCACTTGGCGCCCCATTCCGCAGTATGAAGAAACTAGA
AGAGTTGATGCCGCTGATGGAATAAGaACTCCAGTAATGGCAGGTGGATT
ATTCTCAATGGATCGcgattatttttataaacttGGAAGTTATGATACTG
GTATGGATATCTGGGGTggtgaaaatattgaaatatcgTTCAGGatttGG
ATGTGCGGAGGTTCAATTGAAATGTTACCCTGTTCACGAGTCGGCCATGT
TTTCCGACCCAAATTTCCGTATAGTTTTCCGAGCAGTCGCAAAGGGGACA
ATGATGTTGTTAGTCGAAATTTGATGAGAGTTGCGGATGTCTGGATGGAT
GATTACAAAAAGCATTTCTATAATATCAGatttgatttgaagaaaaaaga
acccGAAGACACAACCGAACGAAAACAACTTCGACAAAATTTACAATGTA
AATCATTTTCTTGGTATTTGGAGAATATTTACCCCGAACTGGAAATTCCT
GATGATAACTTTGTACAAGCTGGAGAAATTAAGAATCCTGACACGACTGT
ATGTTTGGATACACTTGGGAAAGGTGAAGCATCAGTTGTTGGTCTTTATG
AATGTCATGGACAGGGTGGTAATCAGtaTTTCACATTGAACAAGAAAGGT
GAAATAAAGAACGAAGACAATTGCCTGACTATCAACGGTCCGAACCTCGT
TTTGAGAGAATGCGAAGAACGGTCAAGGAAAGGACAACGGTGGGCCTTCA
AGGGCAATCAAATCAAAAGTATTACGCAGAATTCATGTCTTCAAGTCAGA
AATAAAATGAACTTAATAGTAGGTCCATGTACAAGTGGACAAACGCAAAA
ATGGCTAtggaataaaattgaagattttacttaaattaatttttggtgtt
tttagatACAAGatagtttttaattatttttttaggtttttagtttttat
ttggtttttaaTACGTTCAATAGACATATCACATCACAACAATAATAAAG
CTATTTTCTATttgctttgttttatttttattgatgtTGCTTGCCACTTT
GTCACAGACTCAATATTGGGATTAGcc
Run BLAST on NCBI

transcript from alignment at scaffold_36:906512..916990+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061594 ID=TCONS_00061594|Name=TCONS_00061594|organism=Clytia hemisphaerica|type=transcript|length=10479bp|location=Sequence derived from alignment at scaffold_36:906512..916990+ (Clytia hemisphaerica)
TTTTAAGATCATTTGAATACAAAAATTTCAActgatttttaggattttac
tttacaaaaagaattaggATGGAACCTTCAAGGATATCCTTCTTGATGAA
AAACGCATTCACGTTATGATTTTGTTCCAGTTAAAGACACTTTGTTGGTT
CAATTGAAAACTTAATTTAAGAGTGGCAAAACTCTTCTTTTAACTTGATT
AATTCCTGGTTGTAACACATGCGATCAAACCATTAAACATTGAAACAAAT
TGACAATACCCAGTATATTCACCAACACCTTCAATCATGCCAATCCGGCT
AAAACGTAATCGAGTTATAATTACATCCGTCATTTGTATATTATTGGTCC
TACTCATAATGGAGTCAAGAacattaaagaaaaataatcagCTTGataca
acaaacaacaatcatgAAATATCTCGCCTCGGCCGATCTCTTATGAGATA
CGCAACTTTTGATGCCAGTCCCGAAATGCGGCGAACACAACCCGGTTTTA
TGGGACGTGGTGTCAAAGTATTAcctaatgaaaaagaaaaagaagctgAA
GGATATAAAAGTCATTCTTTCAATCAACTAGCAAGTGATAAAATTTCTTT
AGAACGTGTTTTACCGGATTATCGGAATCAATTGTAAGTATCGGGTTATC
GGGATAAAGTAAAATTGATATCAATAATTATGAAACGactattttgtaat
tttgacagGAGGCAGGTACTTCATGCCAACCACAAGCGTtgcttgaaaaa
tatcaaaattttatacATCTACCTTTAGCAGAGtggtcagcccctgaaga
gactGGTAACAAAAAAAGATAGAAATGTCTTTCCGGCGACAGTATCGAAA
ATAGAATTATAGGATACTTCTGTAAACAATTGAGGTGGTAAAGTATCGAC
AATTTTGTTAAGCTGTATTCACAATGCTAAAAAAAGTTGACACCTCAATG
AAATTTCATACGACATTTAGTTTTTCGAAATACCGTAAGCTGAGAAAAGA
TTTTCCTTGCAAATTCAATACCAGTTCCCTGAAAAGCCGATAAGGTTGAT
AGGtatattgacgtcaaaaatttcATTGTATTGATATACAGGGTGGTCCA
ATGAATACCTTCCACTAGTATAATAAAGTATCTTACCTGAAACAAATCTC
CTTTCTGTTTTCACAGATGTCGCTCGAAGAAATATCCAACCAAGCTACCG
AGTACCTCAGTTATCATCTGTTTCCATAACGAAGCGTGGTCGACATTGTT
AAGGACCGTTCACAGTGTCATCAATCGAACACCACCTgattatttgaaag
aaattgtaTTGGTTGATGATGCAAGTACCAGGGGTAAGCATTTGAGGAAC
AATTTTTTATATAACTAACACTGTTTAAAGTTCTTCCTCTCCAGTGAAGT
ATATAAAGAGGCTTTTCCGTCTAAAAATTCTACACAATTCACTAAAGtta
caaaaatatgtaaaatctaTTTTCTGTCTCAGGCGAAAAACCTCGGTTTT
GACTACTGCCAAAGATCATCTTACCAAAAAAAAGCTAAGAAGTACTTTAA
TCGGAATATCATACATTTTCGCGAGCTAAAGATTCGCGAAATTATTTTGG
TCTGTTTTCgacaaacaaacttttttaaattattttgaggattaaatttc
gcaaaaattgaTTTAGAAATGGCCCTTACTTTGCTAATTTTcgtcaaaaa
cattttaatgactttaaaTATGGACTTGATCTCGCAAGTCAGCGATTTCA
CAAGatttattgtttatttattgTCTCATTAAAGTATTTAGTAATACCTC
ACAGACTGGCTAAGGTTATGATTGAATTCTTTTTGGGACCAGCAACGTTT
TAAATCACCTGAGTTGAAATGTATAATTCCAAAAGATCTTTATGATTTAT
TCTTTCTACAGACGATTTGAAGCAAGCCTTAGAAGACTACATCATAAACC
TACCCAAAGTCAACATCGTCCGTTTAAAGAAAAGAGAAGGATTGATACGA
GCTCGGCTAGAAGGAGCAAAAGTTTCCAAAGGAGAAGTTCTAACATTCTT
AGACGCTCACTGCGAATGTACATTAGGGTGGATTGAACCTTTATTGGCTA
AAATTAAAGAGAAGAAATCAAATGTTGTGATGCCTGTTATAGACGAAATA
AGTGAAACAGATTTTCATTATAATGCTGTACCGGAGCCTTTCCAGAGAGG
TGTTTTTAAATGGAGATTGGAATTCACTTGGCGCCCCATTCCGCAGTATG
AAGAAACTAGAAGAGTTGATGCCGCTGATGGAATAAGGTATTACTGCTTG
TCTGAGAATGAGAGCAtaaattctatttttcattcGAAAAGAGCCCGttg
aaataacaataaaaatctttcaaaattatcTATATTTTCCCCTGATGAAA
AAAGTTGAGCTTTCATTGACCTTGTGGTACTGACCTTAGACGAtactatc
gtctacacaagatcactaaaaaagggaatagtttaggagaggcgtgataa
attcgggtggagtaagcagtggcggagatgtttacagtgtagaCGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTgcgccaaattggtatc
gtccgtttcttcgaaactctaccgccacttttttcccgtaaaccgcccta
aCGCCCGAAttttttcccgcgtttactgtaCCGACCTTTattttaaacgg
acgatagcatcgtctatacTGACCTAGGCTTCTGTACATCTTCAAACGAA
GAAAATATCTGCCCATAACTATgggtgggtcaaaatatttctattcaAAT
GCTTATTTAAGACTGATCTGCTTGAAGTTTGTACTAATTTTgaacgaaaa
ttaaaaaaaactgctAAATTGACATAGACTTGTTAGATTAATGTCTGATT
TTGAACTAGCCGGGAACTTCTAAAGGTGTTGATTAACAGACCAACCCCAT
CGCTAAATCTTTTAGCCGAATTATGCATGTTACCCCTGGCATTGTTTGAG
AACAAGAACCTTATTGTTGATGCGATTACcttagatttataaagcccgaa
gggctagatatcgtgcttttgTTGAAAAgcgtgccgtggttaggtaggaa
atcctacctaagtcacgtgacattacaatagaatttcagcgattgaccaa
tcagaaacttcgtgggttttcgaaaacaatagcaacaatatttttttccg
atattcactttttttgcctgcgatggcttaaagcccgacagcccttcggg
ctttataaatctatggcgATTACATGTTTGAGGAGTACATCTTCAAAAAA
TACGCAGTAGCCTTATGTAACAATCGACTTCATCCATTCTTCAACCTCGA
AAGAATCGTGTACATTTTCTAGCAAAAGAATTTCTATCAAGAAAGGTAGT
AGAATTTTCCAAATCATGAAGGGCTCCAGTTTGGATCATTTTTGGATGTA
ATGGGGAGTCTggtaaaacttttcttttgctttttagaACTCCAGTAATG
GCAGGTGGATTATTCTCAATGGATCGcgattatttttataaacttGGAAG
TTATGATACTGGTATGGATATCTGGGGTggtgaaaatattgaaatatcgT
TCAGGGTAGGAAAACGTTCGTTTTTTCTAATATACCCAGAGATCAGCTTT
TCCCTgtagaccatgttcgcacgtgacggttccgtttcgcccCGAAACGA
GATGAAGCAATTCTATTGGTAAAATTCAATTGTTAGATCACTTCTAACCA
ATCGTGTGACTTTATTCcttttcggagcgaaacggaaccgtcacatgcga
acatggtcttagagAGTAATGTATGAAGATGCACAGAATGAAATATACTT
TGGTATAGTAGCCAGAGATTAGCTCCatataatatttcaaacacTAACCT
TCATTTCACGGTAGGCAAGCTTATGCTCTGAGGGAGAATAATAAAAAGTG
ATATCTTGTTGAAAGGATAATTTTGAGTGGattattttaaggctttcaaa
tcTTTTCGGCGTTTACTCTGGAGAGTTTATATTTGGTCTAGACAGATATA
AAAATTCTGAATACATATTAAAAAATCAGTGAAGTTAAAGGTTCAGAAAA
GTgtaaattcaagatttttgggTCCGGTAGAAAAAGAAGAGGATTTTCcc
gaaaataatattttaactagtacccaaaacaaaaatggttgaatactaaa
aataattttttcttagatttGGATGTGCGGAGGTTCAATTGAAATGTTAC
CCTGTTCACGAGTCGGCCATGTTTTCCGACCCAAATTTCCGTATAGTTTT
CCGAGCAGTCGCAAAGGGGACAATGATGTTGTTAGTCGAAATTTGATGAG
AGTTGCGGATGTCTGGATGGATGATTACAAAAAGCATTTCTATAATATCA
GGTAAAAAATATGCAACCCTGTATTAGTGACCCTATCGAgcctactctgt
accagagtgtatctcacgtttatcgtctCGTAGTACACTATGTGCGCATA
TATGTCTGTTTGATAGAAAAATTCCCATACGGAAACCTCTACAATGAAgt
atagcaacacttctctcattgTCTTCCCTCTCTCACCCgtactccatcgc
agcggtcggtttgaaaaatgtcaaatgagaaaagacaatgataacagacc
ctctacggcaataaattttgaaatcagccgtagatatcgggtcatCGAGC
CCAATCTGTTGCCCTGGCAATGTTTTCAACTCGACATTATATGGGCGTTG
GGCGTTGTTGTGGGCTAGCTTGTTTAGAAAGCACCCTAAAGGACATAAAA
GGAAACGAAACTCGGTTTCAACCGTCATTGTGTTTCCCGAAAAAAAAGAT
TGCCGGATTCctctttttttattgttgtgATGGACGCGATTCAGCCTCAA
AATTCACGCCCACTTAGCTATGTTTCGCAGTTTTTTTGTCATTGAAATAT
TAACGTGGAAGCATATTATTGTACACAAGGTCATAACTTagatttttcat
ttgattttattgaaaaaagtttgataaaaaggaatattatatcaaaagaa
attgcTAAGTGGAAGCGTTTTTGGAGTCTGGATATAAATGGAAAACTTCT
TACGGAAGCATCCTAACCGGACTTTCCCGGAAGTctaattgtttttgaaa
tttgaaacttgATTGTAACTTCCAGTCTTTTTTGGGTGTTTCAGACATTA
ACGTCCAGACATAACAAATTAAAACAACTTGTTTCCCAAACACTGTGTGG
ACACCAAAAAtcgaaacttcaaaaaaagaatGTTACAAAACAAAACGGAT
CGAAACAGATAAGCTCCACTCTATTCACTGAAACTGACCTGCTCCAGTTT
CTTGCTCCAAAtcgtttcaaaacttcctgttCTTAATAAAAACCATATTG
AACCGATGctaaaccgtaacgtctgaacatggtttCAATTTCAAGAATTC
TGAAACTTGCTGGACAAATTGACACATGACGCCCCGCTATGATGCAgcga
tgaaaatagtggagtaAAACCGTTCCGACCTGTTTGCTTTGTGATGTCTT
CTTTCTCGACGTTctgaattttgacgttcacacagtttttagcgagcacc
tcactaaaaacggGATTGTTACGttccgtttcttagtgagttccgcTTTG
ACGatattcgaaaaatagaagcctttctagtgctttgacgcaaattcgat
tttttggacctacctggaggtcctataaattaactgatgttcgtccgttc
gttagttcgttagttcgttaccaacttttctcgagattggatctttagtt
tttcctgatttttggcacaaagatgcaaaatggtaatgcccaaaatgtga
cggagcctgattttcgaaaaaaattcatttccggccgaaaatgccggaaa
tatgccggaaaaaaccgtttttttggcattttctcaagatttcatcatta
gttttttctgattttttgcacaaagatgcgtattaacaatgcccaaaact
tggcctagtccgaattttgagaaaaaatcttttccggtcgaaaatgccgg
aaatatgcagGAAATaaccgtttttgcagattttcatcggactttttcct
tatatttcgttgttttttcacacaaaaacatttttaatagcCATAcccac
catgaagcatggttcaatcgtcaatagaactgagttttgaagccggaact
ttctgaAAATCACCGGAGCAGaccattttcgccggaaaaacggtatttct
tgaatttcttgagctgtactttatatttttttatgaaattttgcacattg
atgtagaatgacaatacctaaaaagtgacggagcccgattttcgaaaaaa
aatatgccggaaaaacggggttttttggcattttctcgagattttatcat
tagttttttctgatttttttgcttaaagatgcgtattaacaatgcccaaa
acatggccgagtctgattttggagaaacatttttttccggccgcaAAGAc
cggaaatatgtcggaaatcgccgtttttctggcttttcattggacttttt
cctttagCTGCttgttttttcactcaaaaacattattaatagcaatgccc
acacCATCAACCATGTTTCAactataaaattgatttttgaagccggaact
gtttaaaaatcaccggaacaacctatttttgccggaaagacagtatttct
tgaatttctcgagctgtactttatatttttttatgaaattttgcacactg
atgtaaaatgacaatacctaaaaagtgacggagcccgaaaaacatttttt
ttcagtcgaaattgccggaaatatgccggaaaatggtttttttggcattt
tctcgagatttcaacactggttttttctgattttttgctcaaagatgggt
cttcgcaatgctcaaatcatggccgagttcgatttttgagaaaaacattt
ttccagttgaaaatgccggaaatcgccgcttttgcagattttcattggat
tttttcctattatttctatgtttttcacacaaaaacattattgataacaa
tgctcaccatcaagcatgattcaattgtcaataaaactgatttttgcgac
cagaactttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNtgattcaattgtcaataaagctgatttttgcga
ccagaactttctatttattttttccctacaacccttccctctcccccaat
CAGCAATCAATGACGAATTTATTACGctaatgcattttcgctaaacgcta
tattttctgacggatttttttcacttttctcctCGCACACATTGCTTTCT
AAccttcatcatcaggtaggtccaatcagcatctagcttgtttgctactg
caggagcttcgaaagttaaaagtgacgtcaaaaaatggaATGTTTAGAGA
CCGAAAACCCGGctcaaaacgttcgaaaaagtcgcaaagcgttaattgcg
taaaaaaacgtgggtgacgtctagtataggcagTGTTTcgtaactttttt
gtttcggAGCGAAATGGAACCGTAACGTCTCAACATGGGCTACCGAAAAA
GGGTTTATATCTATATATTTTTTCCTCACAActttttgtttagatttgat
ttgaagaaaaaagaacccGAAGACACAACCGAACGAAAACAACTTCGACA
AAATTTACAATGTAAATCATTTTCTTGGTATTTGGAGAATATTTACCCCG
AACTGGAAATTCCTGATGATAACTTTGTACAAGCTGGAGAAGTAAGTTTT
GCTACAAACAAAATATATTTCCTTGTAATTTTATCATCTTATTACTTGTT
TGACAAAAGGAGCATTACCGTCACTAAAGCCCTCGTCATGGAGAAATCTT
ATCGCGTCAAAAGCACTGTCGTTTCACCGAACCCATTGTAAATCTTCCCT
GAAAATAAGGCTTTTAATTTAGCAAAATAATAATGCAATCTACAGTAAGA
ATGTATCGAAAAGAAGGCTTTTAAAGCCCATCataaaaaaccccggtttt
TACCgatagtggcaaatttaagctTGATAAAGATTGTTTGAAATCtctgc
cactactggcaaaaaccaggGTTTTTCATTACCTCACATTACCTCATGAN
ctacccccttggaacggaaatggacctcctcaacagggggtgcacgattt
ttttctggaaaagcccaatagcatttttttgaaaaaaatccaaatcacgc
atcacggctTAAAAGAATTTTCATATCATGATCACATTTTGACCCCTGAT
AACGCAGTCacgaaaaaagttcaaaatcacATAATCACGCTAGAATAAAG
TCCCTATCCTGACGCTATGTCCCTATCACGCAAATCTCTTTCGGGCCTAT
AAATGCTTTTCAACATTGATTCGTTTAGATTAAGAATCCTGACACGACTG
TATGTTTGGATACACTTGGGAAAGGTGAAGCATCAGTTGTTGGTCTTTAT
GAATGTCATGGACAGGGTGGTAATCAGGTATGAATCGTAATACACAATCA
CAGACATAAATTGCGAGACAAAAGCAAATTCTAATCTATTCCCCCCTTCC
CCCATTTGCAATGTTCAATGAACGGTGGGGCGGCCGTGGAGGTGGAAGGG
GAGTCTGATTTCTACGTTTTTACTGCACATTCCGGCGTTTGTCTCAGATA
TTTTTGTTCGTGATTGCGGTTCttctctctaatttgatcttcaaaggacc
aaaaattttcttcaaatttaagGACAATTCGGATCAGAGAGCGTTTAAAA
CTTCTttctagctgaggggaccaatattttagttcgaattaacagaaaga
ttcgaataataaaagttcgaattagggagagtcCGCTGTATATAATTTTC
CGATAAATCCATAAACGGTTTATATAAAAAGACTGAGACAACGATTTGCT
TTTTGACCAGTATAGTGACCACTATGGTACCAGGCAATTCAATCAAATAT
ATTAGACTCCCTCTAATTTGATCTTCCaaagattttcttcgaattagaga
aagattctgTACTTCAACAGTCTTTTTAATTCCACATCAAATTTTatatg
tttttcttcttttcagtaTTTCACATTGAACAAGAAAGGTGAAATAAAGA
ACGAAGACAATTGCCTGACTATCAACGGTCCGAACCTCGTTTTGAGAGAA
TGCGAAGAACGGTCAAGGAAAGGACAACGGTGGGCCTTCAAGgtaactaa
aattatttttacaaccaaTTTATGATATCCATGAGATATTGTTTTACACG
GAAGCACGCTCAGTGGTGAAAACGCTCTTCTCGAAATGCGTAAAAATAAT
TGCCAACCTCGTTCTCGAAGACTTGTTGCTACGATACTTCAACGATGTCA
GACATAGTCGATATTTGTAAGCGTTTGCGGTTttgtatcaaaattgaaaa
tagtcTTTTGGGAAAACATACCATAATATGTGTAAATgtcatttgaaata
attatttcatttgaaaacgaggcctgcAATGCTGTTTAGCGAGAAGTTGT
GTattagaaaattcttttttacaattttggcaaaaattgggATTTTTCCG
taaaaacattacgtaatgaatatcatgaatcatTATCATGATACATTGTT
TGTAACGAGAGGAAAAATACCAATGGTGGTTTCTTTAAGGAACCGCAACC
GCAAGtagatttctttataagaacaattccaAAGAATTTTGAAgcccttt
aaatgttcttatttttttgagttttcaagCCAGAAATCATCTTAAGACTC
AAGTCTTGAATGAATAGGTCTTTAGTTTAGCATAGTATACAAATAATTCA
GACATCGTAgaaattaagcaaaaaataaCATCGTTACAATTATGATATTA
GCCATAGGCGAAGCGagatttatgagggagtgcagacgttcatgacatat
tcattatctttttataaaacaaagacaataattacagtgtcgtaaaaacc
gctctcatcaaTAAATCTTGCAGGGTATATCTCGCTACACCTATGTTAAA
TCATATGACCAAAGTCGTTTATAATTCGTGTTATACAAAGTCTAGGTCTT
CAGTCTGATTTCATTGAGACCTTTTGCAATGAtacattttctttcttatt
ttagGGCAATCAAATCAAAAGTATTACGCAGAATTCATGTCTTCAAGTCA
GAAATAAAATGAACTTAATAGTAGGTCCATGTACAAGTGGACAAACGCAA
AAATGGCTAtggaataaaattgaagattttacttaaattaatttttggtg
tttttagatACAAGatagtttttaattatttttttaggtttttagttttt
atttggtttttaaTACGTTCAATAGACATATCACATCACAACAATAATAA
AGCTATTTTCTATttgctttgttttatttttattgatgtTGCTTGCCACT
TTGTCACAGACTCAATATTGGGATTAGcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038642XLOC_038642Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061594-exon-scaffold_36-1491911889:906512..907144TCONS_00061594-exon-scaffold_36-1491911889:906512..907144Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1510915933:906512..907144TCONS_00061594-exon-scaffold_36-1510915933:906512..907144Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1575043694:906512..907144TCONS_00061594-exon-scaffold_36-1575043694:906512..907144Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1491911889:907678..907844TCONS_00061594-exon-scaffold_36-1491911889:907678..907844Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1510915933:907678..907844TCONS_00061594-exon-scaffold_36-1510915933:907678..907844Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1575043694:907678..907844TCONS_00061594-exon-scaffold_36-1575043694:907678..907844Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1491911889:908423..908798TCONS_00061594-exon-scaffold_36-1491911889:908423..908798Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1510915933:908423..908798TCONS_00061594-exon-scaffold_36-1510915933:908423..908798Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1575043694:908423..908798TCONS_00061594-exon-scaffold_36-1575043694:908423..908798Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1491911889:909999..910116TCONS_00061594-exon-scaffold_36-1491911889:909999..910116Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1510915933:909999..910116TCONS_00061594-exon-scaffold_36-1510915933:909999..910116Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1575043694:909999..910116TCONS_00061594-exon-scaffold_36-1575043694:909999..910116Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1491911889:910728..910912TCONS_00061594-exon-scaffold_36-1491911889:910728..910912Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1510915933:910728..910912TCONS_00061594-exon-scaffold_36-1510915933:910728..910912Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1575043694:910728..910912TCONS_00061594-exon-scaffold_36-1575043694:910728..910912Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1491911889:914155..914302TCONS_00061594-exon-scaffold_36-1491911889:914155..914302Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1510915933:914155..914302TCONS_00061594-exon-scaffold_36-1510915933:914155..914302Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1575043694:914155..914302TCONS_00061594-exon-scaffold_36-1575043694:914155..914302Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1491911889:914940..915038TCONS_00061594-exon-scaffold_36-1491911889:914940..915038Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1510915933:914940..915038TCONS_00061594-exon-scaffold_36-1510915933:914940..915038Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1575043694:914940..915038TCONS_00061594-exon-scaffold_36-1575043694:914940..915038Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1491911889:915628..915753TCONS_00061594-exon-scaffold_36-1491911889:915628..915753Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1510915933:915628..915753TCONS_00061594-exon-scaffold_36-1510915933:915628..915753Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1575043694:915628..915753TCONS_00061594-exon-scaffold_36-1575043694:915628..915753Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1491911889:916666..916990TCONS_00061594-exon-scaffold_36-1491911889:916666..916990Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1510915933:916666..916990TCONS_00061594-exon-scaffold_36-1510915933:916666..916990Clytia hemisphaericaexon
TCONS_00061594-exon-scaffold_36-1575043694:916666..916990TCONS_00061594-exon-scaffold_36-1575043694:916666..916990Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:906512..916990 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.82125	1.60253	0.79186	1.07388	2.12746	3.11363	17.3293	14.6026	6.55432	5.43045	8.81687	4.50879	8.9953	7.21326	7.93455	12.6165	9.30895	8.39908	12.1216	14.0161	9.0598	10.3366	8.84229	10.1061	4.82283	8.45298	0.824848	0.288821	4.81826	2.56105
Blast
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BLAST of TCONS_00061594 vs. Swiss-Prot (Human)
Match: GLT13 (Polypeptide N-acetylgalactosaminyltransferase 13 OS=Homo sapiens GN=GALNT13 PE=2 SV=2)

HSP 1 Score: 502.286 bits (1292), Expect = 2.295e-169
Identity = 254/499 (50.90%), Postives = 340/499 (68.14%), Query Frame = 2 
Query:  491 PGFMGRGVKVLPNEKEKEAEGYKSHSFNQLASDKISLERVLPDYRNQLCRSKKYPTKLPSTSVIICFHNEAWSTLLRTVHSVINRTPPDYLKEIVLVDDASTRDDLKQALEDYIINLP-KVNIVRLKKREGLIRARLEGAKVSKGEVLTFLDAHCECTLGWIEPLLAKIKEKKSNVVMPVIDEISETDFHYNAVPEPFQRGVFKWRLEFTWRPIPQYEETRRV-DAADGIRTPVMAGGLFSMDRDYFYKLGSYDTGMDIWGGENIEISFRIWMCGGSIEMLPCSRVGHVFRPKFPYSFPSSRKGDNDVVSRNLMRVADVWMDDYKKHFYNIRFDLKKKEPEDTTERKQLRQNLQCKSFSWYLENIYPELEIPDDNFVQAGEIKNPDTTVCLDTLGKGEASVVGLYECHGQGGNQYFTLNKKGEIKNEDNCLTI---NGPNLVLRECEERSRKGQRWAFKGNQ--IKSITQNSCL---QVRNKMNLIVGPCTSGQTQKWL 1957
            PG MG+ V +  +++EK  E +K + FN +ASD I+L R LPD R + C++K YP +LP+TSV+I FHNEAWSTLLRTV+SVINR+P   L E++LVDDAS RD LK  LE+Y+ NL   V I+R+++R GLIRARL GA  SKG+V+TFLDAHCECTLGW+EPLLA+IKE +  VV P+ID IS+  F Y A  +    G F W+L F W P+PQ E  RR  D    +RTP MAGGLFS+DR+YF ++G+YD GMDIWGGEN+E+SFRIW CGGS+E++ CS VGHVFR   PY+FP    G   V+++N  R+A+VWMD++K  FY I   + K +  D + RK LR+NL+CK FSWYLENIYP+ +IP   +   GEI+N +T  CLD +G+ E   VG++ CHG GGNQ F+     EI+ +D CL +   NGP ++L+ C    R  Q W +   +  ++ +  N CL      +KM   +  C+  ++Q+WL
Sbjct:   57 PGEMGKAVLIPKDDQEKMKELFKINQFNLMASDLIALNRSLPDVRLEGCKTKVYPDELPNTSVVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLTLENYVKNLEVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKTVVCPIIDVISDDTFEYMAGSD-MTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVFRKATPYTFPG---GTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKVDYGDVSVRKTLRENLKCKPFSWYLENIYPDSQIP-RRYYSLGEIRNVETNQCLDNMGRKENEKVGIFNCHGMGGNQVFSYTADKEIRTDDLCLDVSRLNGPVIMLK-CHH-MRGNQLWEYDAERLTLRHVNSNQCLDEPSEEDKMVPTMQDCSGSRSQQWL 548
The following BLAST results are available for this feature:
BLAST of TCONS_00061594 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLT132.295e-16950.90Polypeptide N-acetylgalactosaminyltransferase 13 O... [more]
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