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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061585 ID=TCONS_00061585|Name=TCONS_00061585|organism=Clytia hemisphaerica|type=transcript|length=1004bp
CGATTGAGCTCCATCAGCTGGACTTGATTTCTTTGGAGGGTCGTTGTGAG
GTGAAGAACGATGTTGCTATTTCGTTCTCTCTTTTCTTTCTTGATTTCGT
TTTTCTTTGTAGGCAGTCGAGGATCAAGTTTATATGCGTATTCTTGGCTT
ATGATTGTATCGGATAGATTGGATGTGATGAGTTTAGAGTTCTTATATTC
ATGCTGGCACAGTTCACTGAAGATCGGAATCGCAAGACCCCCATCTCTCG
CTGGCAACGATAGCAGTAATCTCTCTTCCTCGTTGACTGAAATGCCACCA
GTGATTGCTGGAATGAATTTTGTTGTGACTATGTTGTCCAGCGGAACCAT
GTTATCAGATATTTCTGGTATTGTTCTCATCAAGAATGTAAGCTTACTTT
TGAATCCACTTACAAAACAGGCGTATGCACATTGTGGTTCTATGAGAGCT
ATTTTCGAAAGTATAAGGAGCTCATCACATCGTCAACGTGTGTATCTCGG
AATGAATTTGGCCCGATATTCAACTTCAGCTTTCGAACGTTGACCTGCTT
TGACGATCAGCCAAGATTTCTTTTCTTCGGGATAGTATCCGAACAATGGA
CCGAGTCTGCACAGATTATTCCACCAACATCTGATACCACTGATCTTGCC
TGCAGCAGAAAAATCGTCAGCGTAGGCTTCGGCTTTCGTTTGATCCAGAT
GGCTCTCTGGCGTTGCATTTATCACCATCAGTAGCAGAGGTATCGTTGCG
ATTGCATAAACTGTCATAGCGATCGGGTCTCCTTGAGTCGTACCTTCTTG
TGAGAGCAGCTCGAAGCCTCCAATAACAAAAAGACGGGTTTGAATAGCAG
TTGGAAACAAATCCTGAGACTTCCAGGCAGATGACTTTGATGTTGTGTAG
GAAGGCTTTTCGGTTTACTGCATTGAATGCGTTACTTGCGTCAATTAGCA
GGACGGCTTCAGTCTTCTCCTCGTCATAAATTAATTTCATGGCATGGATG
GCAG Run BLAST on NCBI transcript from alignment at scaffold_36:816636..817639+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061585 ID=TCONS_00061585|Name=TCONS_00061585|organism=Clytia hemisphaerica|type=transcript|length=1004bp|location=Sequence derived from alignment at scaffold_36:816636..817639+ (Clytia hemisphaerica)
CGATTGAGCTCCATCAGCTGGACTTGATTTCTTTGGAGGGTCGTTGTGAG
GTGAAGAACGATGTTGCTATTTCGTTCTCTCTTTTCTTTCTTGATTTCGT
TTTTCTTTGTAGGCAGTCGAGGATCAAGTTTATATGCGTATTCTTGGCTT
ATGATTGTATCGGATAGATTGGATGTGATGAGTTTAGAGTTCTTATATTC
ATGCTGGCACAGTTCACTGAAGATCGGAATCGCAAGACCCCCATCTCTCG
CTGGCAACGATAGCAGTAATCTCTCTTCCTCGTTGACTGAAATGCCACCA
GTGATTGCTGGAATGAATTTTGTTGTGACTATGTTGTCCAGCGGAACCAT
GTTATCAGATATTTCTGGTATTGTTCTCATCAAGAATGTAAGCTTACTTT
TGAATCCACTTACAAAACAGGCGTATGCACATTGTGGTTCTATGAGAGCT
ATTTTCGAAAGTATAAGGAGCTCATCACATCGTCAACGTGTGTATCTCGG
AATGAATTTGGCCCGATATTCAACTTCAGCTTTCGAACGTTGACCTGCTT
TGACGATCAGCCAAGATTTCTTTTCTTCGGGATAGTATCCGAACAATGGA
CCGAGTCTGCACAGATTATTCCACCAACATCTGATACCACTGATCTTGCC
TGCAGCAGAAAAATCGTCAGCGTAGGCTTCGGCTTTCGTTTGATCCAGAT
GGCTCTCTGGCGTTGCATTTATCACCATCAGTAGCAGAGGTATCGTTGCG
ATTGCATAAACTGTCATAGCGATCGGGTCTCCTTGAGTCGTACCTTCTTG
TGAGAGCAGCTCGAAGCCTCCAATAACAAAAAGACGGGTTTGAATAGCAG
TTGGAAACAAATCCTGAGACTTCCAGGCAGATGACTTTGATGTTGTGTAG
GAAGGCTTTTCGGTTTACTGCATTGAATGCGTTACTTGCGTCAATTAGCA
GGACGGCTTCAGTCTTCTCCTCGTCATAAATTAATTTCATGGCATGGATG
GCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061585-exon-scaffold_36-1491911889:816636..817639 | TCONS_00061585-exon-scaffold_36-1491911889:816636..817639 | Clytia hemisphaerica | exon |
| TCONS_00061585-exon-scaffold_36-1510915933:816636..817639 | TCONS_00061585-exon-scaffold_36-1510915933:816636..817639 | Clytia hemisphaerica | exon |
| TCONS_00061585-exon-scaffold_36-1575043694:816636..817639 | TCONS_00061585-exon-scaffold_36-1575043694:816636..817639 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:816636..817639 + |
Blast
The following BLAST results are available for this feature:
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