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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061577 ID=TCONS_00061577|Name=TCONS_00061577|organism=Clytia hemisphaerica|type=transcript|length=1092bp
aaaatttaaataaagATGTAAGATTACAAGCTGTGAAGCCTTGGAACCAT
TGGACCACGTGATTGTAGCCATGACAACCGTCGATAGCAGTGTGTCATGT
ACCTTCAGCGATGCTTTGTATGTAACAGCTGATGATGATAAAAGCTCAAA
GGAAGATGCCAGCAGTGAATATTTTACAGCTAACACACATCAATCAACCT
CCATAGACGATTCTGGCTTATCTTGCACTCCGCCTTATGGCTGTTTACTT
AGCTCTGGTACGATAGATACAGACTTGTTGGAGGAGACTCTGGAAGGTGA
AAtcttaagtgattttctaagtCCTGCGAGGGACGAGAGAGAAgaaataa
tcaatgatgaaaaagaacgaaaaagcTCTGCTAATTCAAACTCCTTTATT
ATAGTCTCGACTAGCCATATGCGACACAAGTCGAGTTCATCCAGTTTCAA
TGAAACTCGGTCTGGGCGATCAAGTCGATGTAGTGAAAGTATAAGTAGTC
AATTTAATGTGGACCCGaatgatgatttttttgttgaacAGCCGAGCATG
GAATATGAGGATGCGTTCGTACCATGTGCTCAATCTTCACCAACCAAAGC
TGAACAAAAAGAACGTGAGAAAATCTTCATACGAGAGTTATCGTTTGACG
AGTTGCAAGATGTAAAAGGAGTTGATTTAATGGCACCTGTTTTCTTGGCT
GTTACTAACGACGCTGATGATAATGTTTACGATTTGCAAAGGAAATGTAA
ATCCATTGAAGACCTTTGTAGCGTGATCAATCAAGAAATGAATGATCTTG
AAGGTATGAACTAAGTATCTTTTTTGTGCTATCCTACCGGGTGTCCAAGA
AAAAAATCCTTCTCTTTAAAGTgatttttctcgagttctatcaACTGTTA
AAAGCAATCAATCTTTTgccattggaaagaggaaggataaacttaaattt
taaggGGTCTGGGATTATCCAGAACAAAACCCTATACACCATTGTTGTAG
AGGTTTGGCCTTAAGAGACCAATCCCCTTGGAGCTTCAACTGACTTGAAC
CTTCATAAAATTCAAGACAACCCCCGTCATCCTACAAACCGG Run BLAST on NCBI transcript from alignment at scaffold_36:679223..680314+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061577 ID=TCONS_00061577|Name=TCONS_00061577|organism=Clytia hemisphaerica|type=transcript|length=1092bp|location=Sequence derived from alignment at scaffold_36:679223..680314+ (Clytia hemisphaerica)
aaaatttaaataaagATGTAAGATTACAAGCTGTGAAGCCTTGGAACCAT
TGGACCACGTGATTGTAGCCATGACAACCGTCGATAGCAGTGTGTCATGT
ACCTTCAGCGATGCTTTGTATGTAACAGCTGATGATGATAAAAGCTCAAA
GGAAGATGCCAGCAGTGAATATTTTACAGCTAACACACATCAATCAACCT
CCATAGACGATTCTGGCTTATCTTGCACTCCGCCTTATGGCTGTTTACTT
AGCTCTGGTACGATAGATACAGACTTGTTGGAGGAGACTCTGGAAGGTGA
AAtcttaagtgattttctaagtCCTGCGAGGGACGAGAGAGAAgaaataa
tcaatgatgaaaaagaacgaaaaagcTCTGCTAATTCAAACTCCTTTATT
ATAGTCTCGACTAGCCATATGCGACACAAGTCGAGTTCATCCAGTTTCAA
TGAAACTCGGTCTGGGCGATCAAGTCGATGTAGTGAAAGTATAAGTAGTC
AATTTAATGTGGACCCGaatgatgatttttttgttgaacAGCCGAGCATG
GAATATGAGGATGCGTTCGTACCATGTGCTCAATCTTCACCAACCAAAGC
TGAACAAAAAGAACGTGAGAAAATCTTCATACGAGAGTTATCGTTTGACG
AGTTGCAAGATGTAAAAGGAGTTGATTTAATGGCACCTGTTTTCTTGGCT
GTTACTAACGACGCTGATGATAATGTTTACGATTTGCAAAGGAAATGTAA
ATCCATTGAAGACCTTTGTAGCGTGATCAATCAAGAAATGAATGATCTTG
AAGGTATGAACTAAGTATCTTTTTTGTGCTATCCTACCGGGTGTCCAAGA
AAAAAATCCTTCTCTTTAAAGTgatttttctcgagttctatcaACTGTTA
AAAGCAATCAATCTTTTgccattggaaagaggaaggataaacttaaattt
taaggGGTCTGGGATTATCCAGAACAAAACCCTATACACCATTGTTGTAG
AGGTTTGGCCTTAAGAGACCAATCCCCTTGGAGCTTCAACTGACTTGAAC
CTTCATAAAATTCAAGACAACCCCCGTCATCCTACAAACCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061577-exon-scaffold_36-1491911889:679223..680314 | TCONS_00061577-exon-scaffold_36-1491911889:679223..680314 | Clytia hemisphaerica | exon |
| TCONS_00061577-exon-scaffold_36-1510915933:679223..680314 | TCONS_00061577-exon-scaffold_36-1510915933:679223..680314 | Clytia hemisphaerica | exon |
| TCONS_00061577-exon-scaffold_36-1575043694:679223..680314 | TCONS_00061577-exon-scaffold_36-1575043694:679223..680314 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:679223..680314 + |
Blast
The following BLAST results are available for this feature:
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