TCONS_00061575 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061575
Unique NameTCONS_00061575
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1431

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061575 ID=TCONS_00061575|Name=TCONS_00061575|organism=Clytia hemisphaerica|type=transcript|length=1431bp
tatatttttagatagtataaataaaaataatttatgtgATGTTGTCCCTA
ATATCAATTAGAAACTTGCAAAAAAGTAATACTTGGAGCCGAGCTTTTTC
TCAGTTGATGCCAGTGTCTACAGCTGTTTTGCAACACCAAAATGCAGAAG
GAAAGACAATTATGCAAAACATATCTGAAATATGGAGTGGTTTCTTACTT
GCTGTACCAAAGAAAAGACGGTCAATTGCTAAAAGAAGATGGCTGAGAAA
ATTTAAAGCCTTAAAGCCAAGAGATGATATTGAGGACTGTGTTGTTTGCG
GTGGTAAAAAACTACGTGGAAAACTTTGCCATCATTGTTATCAATGGACA
ATGTCCTTAACAGAAAAAGTCtggcaaaaacaaaaagatgaagACATGAA
CGAGAAAACTCAACATGGTTTAAGGAATTACCTCCAAAAATTTAAGgaaa
ttgactttgaagaAGTTAAATCTATTGAATTGATTGTTGGCAATGAATCA
GCAGATCTTGATAGCATTGTTTGTCCTCTTGTTTTGGCGTATTACCGATC
ATGCAAAATTAATATTCAGaTTGATGAATCAAATTCAATATGTTTACCTG
TTGTTTGGTGCCACAAAGATGACGTCGAATTAACCACTGAAGCAGTTGCA
TTATTCAAGGACACCTGCTTGCCTATAAAAGATCTGTTATTCCAAAATGA
TTGGGAAGCTTTAAAGGAAAAGTTTTCACACAAGGATTTGAAGGTGACTT
TAGTTGATCATAATCACGCAAGGGAGCACCCTGACTTAAATgaatttgtt
gttgaaattattGATCATCGCATTGATACAAATGACTTCATAAACATATC
CAAGAAGATTCAACTCTTGGGTTCCTGTTCCTCaataatcgcacaatggc
ttcaTCAAACAGATAGTGAATTTCTCGTCAATTCACNGTTCAACGACACC
TGCTTGCCTATAAAAGATCTGTTATTCAAAAATGATTGGGAAGCTTTAAA
GGAAAAGTTTTCACACAAGGATTTGAAGGTGACTTTAGTTGATCATAATC
ACGCAAGGGAGCACCCTGACTTAAATgaatttgttgttgaaattattGAT
CATCGCATTGATACAAATGACTTCATAAACATATCCAAGAAGATTCAACT
CTTGGGTTCCTGTTCCTCaataatcgcacaatggcttcaTCAAACAGATA
GTGAATTTCTCGTCAATTCACCTGATGTCTGCAAAATGCTTTTGGCAACT
ATCTTGGTTGACACTTATAACTTGGATTTACACAGCGGTAGAACAACTGA
ACAAGATATTTTCATTGCTGAGCTTTTGTCAAGCTATATAGAAGATGTTG
ATACCGATGAACTGTTCACAAAACGTCAAAAAGGTTTGTCAGTTGATTTG
ACTCATTAGGACTGCACTATTTTACTTTTTA
Run BLAST on NCBI

protein sequence of TCONS_00061575-protein

>TCONS_00061575-protein ID=TCONS_00061575-protein|Name=TCONS_00061575-protein|organism=Clytia hemisphaerica|type=polypeptide|length=456bp
MLSLISIRNLQKSNTWSRAFSQLMPVSTAVLQHQNAEGKTIMQNISEIWS
GFLLAVPKKRRSIAKRRWLRKFKALKPRDDIEDCVVCGGKKLRGKLCHHC
YQWTMSLTEKVWQKQKDEDMNEKTQHGLRNYLQKFKEIDFEEVKSIELIV
GNESADLDSIVCPLVLAYYRSCKINIQIDESNSICLPVVWCHKDDVELTT
EAVALFKDTCLPIKDLLFQNDWEALKEKFSHKDLKVTLVDHNHAREHPDL
NEFVVEIIDHRIDTNDFINISKKIQLLGSCSSIIAQWLHQTDSEFLVNSX
FNDTCLPIKDLLFKNDWEALKEKFSHKDLKVTLVDHNHAREHPDLNEFVV
EIIDHRIDTNDFINISKKIQLLGSCSSIIAQWLHQTDSEFLVNSPDVCKM
LLATILVDTYNLDLHSGRTTEQDIFIAELLSSYIEDVDTDELFTKRQKGL
SVDLTH
Run BLAST on NCBI

transcript from alignment at scaffold_36:670904..673549+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061575 ID=TCONS_00061575|Name=TCONS_00061575|organism=Clytia hemisphaerica|type=transcript|length=2646bp|location=Sequence derived from alignment at scaffold_36:670904..673549+ (Clytia hemisphaerica)
tatatttttagatagtataaataaaaataatttatgtgATGTTGTCCCTA ATATCAATTAGAAACTTGCAAAAAAGTAATACTTGGAGCCGAGCTTTTTC TCAGTTGATGCCAGTGTCTACAGCTGTTTTGCAACACCAAAATGCAGAAG GAAAGACAATTATGCAAAACATATCTGAAATATGGAGTGGTTTCTTACTT GCTGTACCAAAGAAAAGACGGTCAATTGCTAAAAGAAGATGGCTGAGAAA ATTTAAAGCCTTAAAGCCAAGAGATGATATTGAGGACTGTGTTGTTTGCG GTGGTAAAAAACTACGTGGAAAACTTTGCCATCATTGTTATCAATGGACA ATGTCCTTAACAGAAAAAGTCtggcaaaaacaaaaagatgaagGTACACT TAGGAAGGATCGATTtgtcaaataataaaaaaatcgatTTGAATATTGAT TAAATTTTAGAACATGTTTTTATATTGTGACTGTGTATTTCTATGTATAA TTTTGTGAGAAACATATATATAAAGTGTCCAAATCAATTTATCTTTTATC AATTCCTTGATGGGTTCTGTGAAACTTTGAGAAGTCCTTTCTATGTGTTT TACTTTGTCTTATTATATATTATGATTCCTTTTAAATCTCCGAATTCATG TTTTCTGGGCATAGTTTTTAGTGATGCTGCCACCTCATTCTCATGTGATA TCAGGTGTTCTGTTAAAGAGAATCCAAATCATATTGGTAAAAAGTCTTCT TACAAttgcaacattttttgaatgcaaaattattactttttattctttaa cTTTACAATATGGAAGACATGAACGAGAAAACTCAACATGGTTTAAGGAA TTACCTCCAAAAATTTAAGGTGAGACAATTTTTATTGCAAACCAAAGAAA GTGAGAAGATTATTgtccaaatagaaaaaaactttaattagTTCCCATGT TGGTAAAGATCAGCTCCCACAAAAAGTTACTTTATTTACTATGAGGTAAT GAAAACAGGATTCCTCTGGGAAAAATTGCCATTTTAATGAAATGCCAAGA ATCATATAGCTTAGTGTTATACACTCTTTGTCTTGAGACCATTTtaactt ctttttcaaaagaatgttGACATGGTCCAAATACAACAATGGTTTTGTAT TTCCCTTttaggaaattgactttgaagaAGTTAAATCTATTGAATTGATT GTTGGCAATGAATCAGCAGATCTTGATAGCATTGTTTGTCCTCTTGTTTT GGCGTATTACCGATCATGCAAAATTAATATTCAGGTTTCAAGCATtatat attttcttcattttgttaTCTCATGATGAGACGACCTTTTCGATACAAGT TCTTGATACCTGAATGTATGTTTCCAGGATCCTTGTCACAAAAGCCTTGt cctttgaaaaaaagtatgggtatataaatcaaaagaaatgatATTCATCC AAGTTAGTAAAGTTTCTTGtgatgtttttctcaaagaTTGATGAATCAAA TTCAATATGTTTACCTGTTGTTTGGTGCCACAAAGATGACGTCGAATTAA CCACTGAAGCAGTTGCATTATTCAAGGACACCTGCTTGCCTATAAAAGAT CTGTTATTCCAAAATGATTGGGAAGCTTTAAAGGAAAAGTTTTCACACAA GGATTTGAAGGTGACTTTAGTTGATCATAATCACGCAAGGGAGCACCCTG ACTTAAATgaatttgttgttgaaattattGGTAAGCTAATATTTTGaatt aaatgtttttaatgTGTGTTTAGAAAGTACTAAGTGAAAACCTTCTTTCC AATTCTGGACATTATATGATTCAAATGATTCATTCACTACCTCCTAGATT TTATAAGCACTTCTATTTGCTAATTTCAGATCATCGCATTGATACAAATG ACTTCATAAACATATCCAAGAAGATTCAACTCTTGGGTTCCTGTTCCTCa ataatcgcacaatggcttcaTCAAACAGATAGTGAATTTCTCGTCAATTC ACNGTTCAACGACACCTGCTTGCCTATAAAAGATCTGTTATTCAAAAATG ATTGGGAAGCTTTAAAGGAAAAGTTTTCACACAAGGATTTGAAGGTGACT TTAGTTGATCATAATCACGCAAGGGAGCACCCTGACTTAAATgaatttgt tgttgaaattattGGTAAGCTAATATTTTGaattaaatgtttttaatgTG TGTTTAGAAAGTACTAAGTGAAAACCTTCTTTCCAATTCTGGACATTATA TGATTCAAATGATTCATTCACTACCTCCTAGATTTTATAAGCACTCCTAT TTGCTAATTTCAGATCATCGCATTGATACAAATGACTTCATAAACATATC CAAGAAGATTCAACTCTTGGGTTCCTGTTCCTCaataatcgcacaatggc ttcaTCAAACAGATAGTGAATTTCTCGTCAATTCACCTGATGTCTGCAAA ATGCTTTTGGCAACTATCTTGGTTGACACTTATAACTTGGATTTACACAG CGGTAGAACAACTGAACAAGATATTTTCATTGCTGAGCTTTTGTCAAGCT ATATAGAAGATGTTGATACCGATGAACTGTTCACAAAACGTCAAAAAGGT TTGTCAGTTGATTTGACTCATTAGGACTGCACTATTTTACTTTTTA

Coding sequence (CDS) from alignment at scaffold_36:670904..673549+

>TCONS_00061575 ID=TCONS_00061575|Name=TCONS_00061575|organism=Clytia hemisphaerica|type=CDS|length=8226bp|location=Sequence derived from alignment at scaffold_36:670904..673549+ (Clytia hemisphaerica)
ATGTTGTCCCTAATATCAATTAGAAACTTGCAAAAAAGTAATACTTGGAG
CCGAGCTTTTTCTCAGTTGATGCCAGTGTCTACAGCTGTTTTGCAACACC
AAAATGCAGAAGGAAAGACAATTATGCAAAACATATCTGAAATATGGAGT
GGTTTCTTACTTGCTGTACCAAAGAAAAGACGGTCAATTGCTAAAAGAAG
ATGGCTGAGAAAATTTAAAGCCTTAAAGCCAAGAGATGATATTGAGGACT
GTGTTGTTTGCGGTGGTAAAAAACTACGTGGAAAACTTTGCCATCATTGT
TATCAATGGACAATGTCCTTAACAGAAAAAGTCtggcaaaaacaaaaaga
tgaagACATGAACGAGAAAACTCAACATGGTTTAAGGAATTACCTCCAAA
AATTTAAGgaaattgactttgaagaAGTTAAATCTATTGAATTGATTGTT
GGCAATGAATCAGCAGATCTTGATAGCATTGTTTGTCCTCTTGTTTTGGC
GTATTACCGATCATGCAAAATTAATATTCAGaTTGATGAATCAAATTCAA
TATGTTTACCTGTTGTTTGGTGCCACAAAGATGACGTCGAATTAACCACT
GAAGCAGTTGCATTATTCAAGGACACCTGCTTGCCTATAAAAGATCTGTT
ATTCCAAAATGATTGGGAAGCTTTAAAGGAAAAGTTTTCACACAAGGATT
TGAAGGTGACTTTAGTTGATCATAATCACGCAAGGGAGCACCCTGACTTA
AATgaatttgttgttgaaattattGATCATCGCATTGATACAAATGACTT
CATAAACATATCCAAGAAGATTCAACTCTTGGGTTCCTGTTCCTCaataa
tcgcacaatggcttcaTCAAACAGATAGTGAATTTCTCGTCAATTCACNG
TTCAACGACACCTGCTTGCCTATAAAAGATCTGTTATTCAAAAATGATTG
GGAAGCTTTAAAGGAAAAGTTTTCACACAAGGATTTGAAGGTGACTTTAG
TTGATCATAATCACGCAAGGGAGCACCCTGACTTAAATgaatttgttgtt
gaaattattGATCATCGCATTGATACAAATGACTTCATAAACATATCCAA
GAAGATTCAACTCTTGGGTTCCTGTTCCTCaataatcgcacaatggcttc
aTCAAACAGATAGTGAATTTCTCGTCAATTCACCTGATGTCTGCAAAATG
CTTTTGGCAACTATCTTGGTTGACACTTATAACTTGGATTTACACAGCGG
TAGAACAACTGAACAAGATATTTTCATTGCTGAGCTTTTGTCAAGCTATA
TAGAAGATGTTGATACCGATGAACTGTTCACAAAACGTCAAAAAGGTTTG
TCAGTTGATTTGACTCATTAGATGTTGTCCCTAATATCAATTAGAAACTT
GCAAAAAAGTAATACTTGGAGCCGAGCTTTTTCTCAGTTGATGCCAGTGT
CTACAGCTGTTTTGCAACACCAAAATGCAGAAGGAAAGACAATTATGCAA
AACATATCTGAAATATGGAGTGGTTTCTTACTTGCTGTACCAAAGAAAAG
ACGGTCAATTGCTAAAAGAAGATGGCTGAGAAAATTTAAAGCCTTAAAGC
CAAGAGATGATATTGAGGACTGTGTTGTTTGCGGTGGTAAAAAACTACGT
GGAAAACTTTGCCATCATTGTTATCAATGGACAATGTCCTTAACAGAAAA
AGTCtggcaaaaacaaaaagatgaagACATGAACGAGAAAACTCAACATG
GTTTAAGGAATTACCTCCAAAAATTTAAGgaaattgactttgaagaAGTT
AAATCTATTGAATTGATTGTTGGCAATGAATCAGCAGATCTTGATAGCAT
TGTTTGTCCTCTTGTTTTGGCGTATTACCGATCATGCAAAATTAATATTC
AGaTTGATGAATCAAATTCAATATGTTTACCTGTTGTTTGGTGCCACAAA
GATGACGTCGAATTAACCACTGAAGCAGTTGCATTATTCAAGGACACCTG
CTTGCCTATAAAAGATCTGTTATTCCAAAATGATTGGGAAGCTTTAAAGG
AAAAGTTTTCACACAAGGATTTGAAGGTGACTTTAGTTGATCATAATCAC
GCAAGGGAGCACCCTGACTTAAATgaatttgttgttgaaattattGATCA
TCGCATTGATACAAATGACTTCATAAACATATCCAAGAAGATTCAACTCT
TGGGTTCCTGTTCCTCaataatcgcacaatggcttcaTCAAACAGATAGT
GAATTTCTCGTCAATTCACNGTTCAACGACACCTGCTTGCCTATAAAAGA
TCTGTTATTCAAAAATGATTGGGAAGCTTTAAAGGAAAAGTTTTCACACA
AGGATTTGAAGGTGACTTTAGTTGATCATAATCACGCAAGGGAGCACCCT
GACTTAAATgaatttgttgttgaaattattGATCATCGCATTGATACAAA
TGACTTCATAAACATATCCAAGAAGATTCAACTCTTGGGTTCCTGTTCCT
CaataatcgcacaatggcttcaTCAAACAGATAGTGAATTTCTCGTCAAT
TCACCTGATGTCTGCAAAATGCTTTTGGCAACTATCTTGGTTGACACTTA
TAACTTGGATTTACACAGCGGTAGAACAACTGAACAAGATATTTTCATTG
CTGAGCTTTTGTCAAGCTATATAGAAGATGTTGATACCGATGAACTGTTC
ACAAAACGTCAAAAAGGTTTGTCAGTTGATTTGACTCATTAGATGTTGTC
CCTAATATCAATTAGAAACTTGCAAAAAAGTAATACTTGGAGCCGAGCTT
TTTCTCAGTTGATGCCAGTGTCTACAGCTGTTTTGCAACACCAAAATGCA
GAAGGAAAGACAATTATGCAAAACATATCTGAAATATGGAGTGGTTTCTT
ACTTGCTGTACCAAAGAAAAGACGGTCAATTGCTAAAAGAAGATGGCTGA
GAAAATTTAAAGCCTTAAAGCCAAGAGATGATATTGAGGACTGTGTTGTT
TGCGGTGGTAAAAAACTACGTGGAAAACTTTGCCATCATTGTTATCAATG
GACAATGTCCTTAACAGAAAAAGTCtggcaaaaacaaaaagatgaagACA
TGAACGAGAAAACTCAACATGGTTTAAGGAATTACCTCCAAAAATTTAAG
gaaattgactttgaagaAGTTAAATCTATTGAATTGATTGTTGGCAATGA
ATCAGCAGATCTTGATAGCATTGTTTGTCCTCTTGTTTTGGCGTATTACC
GATCATGCAAAATTAATATTCAGaTTGATGAATCAAATTCAATATGTTTA
CCTGTTGTTTGGTGCCACAAAGATGACGTCGAATTAACCACTGAAGCAGT
TGCATTATTCAAGGACACCTGCTTGCCTATAAAAGATCTGTTATTCCAAA
ATGATTGGGAAGCTTTAAAGGAAAAGTTTTCACACAAGGATTTGAAGGTG
ACTTTAGTTGATCATAATCACGCAAGGGAGCACCCTGACTTAAATgaatt
tgttgttgaaattattGATCATCGCATTGATACAAATGACTTCATAAACA
TATCCAAGAAGATTCAACTCTTGGGTTCCTGTTCCTCaataatcgcacaa
tggcttcaTCAAACAGATAGTGAATTTCTCGTCAATTCACNGTTCAACGA
CACCTGCTTGCCTATAAAAGATCTGTTATTCAAAAATGATTGGGAAGCTT
TAAAGGAAAAGTTTTCACACAAGGATTTGAAGGTGACTTTAGTTGATCAT
AATCACGCAAGGGAGCACCCTGACTTAAATgaatttgttgttgaaattat
tGATCATCGCATTGATACAAATGACTTCATAAACATATCCAAGAAGATTC
AACTCTTGGGTTCCTGTTCCTCaataatcgcacaatggcttcaTCAAACA
GATAGTGAATTTCTCGTCAATTCACCTGATGTCTGCAAAATGCTTTTGGC
AACTATCTTGGTTGACACTTATAACTTGGATTTACACAGCGGTAGAACAA
CTGAACAAGATATTTTCATTGCTGAGCTTTTGTCAAGCTATATAGAAGAT
GTTGATACCGATGAACTGTTCACAAAACGTCAAAAAGGTTTGTCAGTTGA
TTTGACTCATTAGATGTTGTCCCTAATATCAATTAGAAACTTGCAAAAAA
GTAATACTTGGAGCCGAGCTTTTTCTCAGTTGATGCCAGTGTCTACAGCT
GTTTTGCAACACCAAAATGCAGAAGGAAAGACAATTATGCAAAACATATC
TGAAATATGGAGTGGTTTCTTACTTGCTGTACCAAAGAAAAGACGGTCAA
TTGCTAAAAGAAGATGGCTGAGAAAATTTAAAGCCTTAAAGCCAAGAGAT
GATATTGAGGACTGTGTTGTTTGCGGTGGTAAAAAACTACGTGGAAAACT
TTGCCATCATTGTTATCAATGGACAATGTCCTTAACAGAAAAAGTCtggc
aaaaacaaaaagatgaagACATGAACGAGAAAACTCAACATGGTTTAAGG
AATTACCTCCAAAAATTTAAGgaaattgactttgaagaAGTTAAATCTAT
TGAATTGATTGTTGGCAATGAATCAGCAGATCTTGATAGCATTGTTTGTC
CTCTTGTTTTGGCGTATTACCGATCATGCAAAATTAATATTCAGaTTGAT
GAATCAAATTCAATATGTTTACCTGTTGTTTGGTGCCACAAAGATGACGT
CGAATTAACCACTGAAGCAGTTGCATTATTCAAGGACACCTGCTTGCCTA
TAAAAGATCTGTTATTCCAAAATGATTGGGAAGCTTTAAAGGAAAAGTTT
TCACACAAGGATTTGAAGGTGACTTTAGTTGATCATAATCACGCAAGGGA
GCACCCTGACTTAAATgaatttgttgttgaaattattGATCATCGCATTG
ATACAAATGACTTCATAAACATATCCAAGAAGATTCAACTCTTGGGTTCC
TGTTCCTCaataatcgcacaatggcttcaTCAAACAGATAGTGAATTTCT
CGTCAATTCACNGTTCAACGACACCTGCTTGCCTATAAAAGATCTGTTAT
TCAAAAATGATTGGGAAGCTTTAAAGGAAAAGTTTTCACACAAGGATTTG
AAGGTGACTTTAGTTGATCATAATCACGCAAGGGAGCACCCTGACTTAAA
TgaatttgttgttgaaattattGATCATCGCATTGATACAAATGACTTCA
TAAACATATCCAAGAAGATTCAACTCTTGGGTTCCTGTTCCTCaataatc
gcacaatggcttcaTCAAACAGATAGTGAATTTCTCGTCAATTCACCTGA
TGTCTGCAAAATGCTTTTGGCAACTATCTTGGTTGACACTTATAACTTGG
ATTTACACAGCGGTAGAACAACTGAACAAGATATTTTCATTGCTGAGCTT
TTGTCAAGCTATATAGAAGATGTTGATACCGATGAACTGTTCACAAAACG
TCAAAAAGGTTTGTCAGTTGATTTGACTCATTAGATGTTGTCCCTAATAT
CAATTAGAAACTTGCAAAAAAGTAATACTTGGAGCCGAGCTTTTTCTCAG
TTGATGCCAGTGTCTACAGCTGTTTTGCAACACCAAAATGCAGAAGGAAA
GACAATTATGCAAAACATATCTGAAATATGGAGTGGTTTCTTACTTGCTG
TACCAAAGAAAAGACGGTCAATTGCTAAAAGAAGATGGCTGAGAAAATTT
AAAGCCTTAAAGCCAAGAGATGATATTGAGGACTGTGTTGTTTGCGGTGG
TAAAAAACTACGTGGAAAACTTTGCCATCATTGTTATCAATGGACAATGT
CCTTAACAGAAAAAGTCtggcaaaaacaaaaagatgaagACATGAACGAG
AAAACTCAACATGGTTTAAGGAATTACCTCCAAAAATTTAAGgaaattga
ctttgaagaAGTTAAATCTATTGAATTGATTGTTGGCAATGAATCAGCAG
ATCTTGATAGCATTGTTTGTCCTCTTGTTTTGGCGTATTACCGATCATGC
AAAATTAATATTCAGaTTGATGAATCAAATTCAATATGTTTACCTGTTGT
TTGGTGCCACAAAGATGACGTCGAATTAACCACTGAAGCAGTTGCATTAT
TCAAGGACACCTGCTTGCCTATAAAAGATCTGTTATTCCAAAATGATTGG
GAAGCTTTAAAGGAAAAGTTTTCACACAAGGATTTGAAGGTGACTTTAGT
TGATCATAATCACGCAAGGGAGCACCCTGACTTAAATgaatttgttgttg
aaattattGATCATCGCATTGATACAAATGACTTCATAAACATATCCAAG
AAGATTCAACTCTTGGGTTCCTGTTCCTCaataatcgcacaatggcttca
TCAAACAGATAGTGAATTTCTCGTCAATTCACNGTTCAACGACACCTGCT
TGCCTATAAAAGATCTGTTATTCAAAAATGATTGGGAAGCTTTAAAGGAA
AAGTTTTCACACAAGGATTTGAAGGTGACTTTAGTTGATCATAATCACGC
AAGGGAGCACCCTGACTTAAATgaatttgttgttgaaattattGATCATC
GCATTGATACAAATGACTTCATAAACATATCCAAGAAGATTCAACTCTTG
GGTTCCTGTTCCTCaataatcgcacaatggcttcaTCAAACAGATAGTGA
ATTTCTCGTCAATTCACCTGATGTCTGCAAAATGCTTTTGGCAACTATCT
TGGTTGACACTTATAACTTGGATTTACACAGCGGTAGAACAACTGAACAA
GATATTTTCATTGCTGAGCTTTTGTCAAGCTATATAGAAGATGTTGATAC
CGATGAACTGTTCACAAAACGTCAAAAAGGTTTGTCAGTTGATTTGACTC
ATTAGATGTTGTCCCTAATATCAATTAGAAACTTGCAAAAAAGTAATACT
TGGAGCCGAGCTTTTTCTCAGTTGATGCCAGTGTCTACAGCTGTTTTGCA
ACACCAAAATGCAGAAGGAAAGACAATTATGCAAAACATATCTGAAATAT
GGAGTGGTTTCTTACTTGCTGTACCAAAGAAAAGACGGTCAATTGCTAAA
AGAAGATGGCTGAGAAAATTTAAAGCCTTAAAGCCAAGAGATGATATTGA
GGACTGTGTTGTTTGCGGTGGTAAAAAACTACGTGGAAAACTTTGCCATC
ATTGTTATCAATGGACAATGTCCTTAACAGAAAAAGTCtggcaaaaacaa
aaagatgaagACATGAACGAGAAAACTCAACATGGTTTAAGGAATTACCT
CCAAAAATTTAAGgaaattgactttgaagaAGTTAAATCTATTGAATTGA
TTGTTGGCAATGAATCAGCAGATCTTGATAGCATTGTTTGTCCTCTTGTT
TTGGCGTATTACCGATCATGCAAAATTAATATTCAGaTTGATGAATCAAA
TTCAATATGTTTACCTGTTGTTTGGTGCCACAAAGATGACGTCGAATTAA
CCACTGAAGCAGTTGCATTATTCAAGGACACCTGCTTGCCTATAAAAGAT
CTGTTATTCCAAAATGATTGGGAAGCTTTAAAGGAAAAGTTTTCACACAA
GGATTTGAAGGTGACTTTAGTTGATCATAATCACGCAAGGGAGCACCCTG
ACTTAAATgaatttgttgttgaaattattGATCATCGCATTGATACAAAT
GACTTCATAAACATATCCAAGAAGATTCAACTCTTGGGTTCCTGTTCCTC
aataatcgcacaatggcttcaTCAAACAGATAGTGAATTTCTCGTCAATT
CACNGTTCAACGACACCTGCTTGCCTATAAAAGATCTGTTATTCAAAAAT
GATTGGGAAGCTTTAAAGGAAAAGTTTTCACACAAGGATTTGAAGGTGAC
TTTAGTTGATCATAATCACGCAAGGGAGCACCCTGACTTAAATgaatttg
ttgttgaaattattGATCATCGCATTGATACAAATGACTTCATAAACATA
TCCAAGAAGATTCAACTCTTGGGTTCCTGTTCCTCaataatcgcacaatg
gcttcaTCAAACAGATAGTGAATTTCTCGTCAATTCACCTGATGTCTGCA
AAATGCTTTTGGCAACTATCTTGGTTGACACTTATAACTTGGATTTACAC
AGCGGTAGAACAACTGAACAAGATATTTTCATTGCTGAGCTTTTGTCAAG
CTATATAGAAGATGTTGATACCGATGAACTGTTCACAAAACGTCAAAAAG
GTTTGTCAGTTGATTTGACTCATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038635XLOC_038635Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061575-proteinTCONS_00061575-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061575-exon-scaffold_36-1491911889:670904..671296TCONS_00061575-exon-scaffold_36-1491911889:670904..671296Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1510915933:670904..671296TCONS_00061575-exon-scaffold_36-1510915933:670904..671296Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1575043694:670904..671296TCONS_00061575-exon-scaffold_36-1575043694:670904..671296Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1491911889:671720..671772TCONS_00061575-exon-scaffold_36-1491911889:671720..671772Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1510915933:671720..671772TCONS_00061575-exon-scaffold_36-1510915933:671720..671772Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1575043694:671720..671772TCONS_00061575-exon-scaffold_36-1575043694:671720..671772Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1491911889:672065..672187TCONS_00061575-exon-scaffold_36-1491911889:672065..672187Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1510915933:672065..672187TCONS_00061575-exon-scaffold_36-1510915933:672065..672187Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1575043694:672065..672187TCONS_00061575-exon-scaffold_36-1575043694:672065..672187Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1491911889:672390..672633TCONS_00061575-exon-scaffold_36-1491911889:672390..672633Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1510915933:672390..672633TCONS_00061575-exon-scaffold_36-1510915933:672390..672633Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1575043694:672390..672633TCONS_00061575-exon-scaffold_36-1575043694:672390..672633Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1491911889:672783..673067TCONS_00061575-exon-scaffold_36-1491911889:672783..673067Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1510915933:672783..673067TCONS_00061575-exon-scaffold_36-1510915933:672783..673067Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1575043694:672783..673067TCONS_00061575-exon-scaffold_36-1575043694:672783..673067Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1491911889:673217..673549TCONS_00061575-exon-scaffold_36-1491911889:673217..673549Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1510915933:673217..673549TCONS_00061575-exon-scaffold_36-1510915933:673217..673549Clytia hemisphaericaexon
TCONS_00061575-exon-scaffold_36-1575043694:673217..673549TCONS_00061575-exon-scaffold_36-1575043694:673217..673549Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:670904..673549 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.73863 2.30643 1.69136 1.65473 2.01447 1.1939 1.60043 0.898982 1.88819 1.68916 1.63954 1.40939 0.827901 1.03175 3.18086 4.0204 2.80347 3.63973 2.24958 2.9079 2.04608 1.76119 2.99733 3.1143 0.534608 0.119282 1.8776 1.27518 2.21067 0.56308
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001667DDH_dom
IPR002677Ribosomal_L32p
IPR011332Ribosomal_zn-bd
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0015934 large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061575 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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