TCONS_00061568 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061568
Unique NameTCONS_00061568
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2920

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061568 ID=TCONS_00061568|Name=TCONS_00061568|organism=Clytia hemisphaerica|type=transcript|length=2920bp
GTCGTTATAAAGGAAAGACGAAAACAGCATTCTGCTTGATCAAGGCAAAG
AATCGAATTTTGAGAGCTGACTGATTGATAAAAAGTTCATACCAACATGC
AAATCAAAGCCAAAGTTGACAAAACACCGAAAACCAACGTTAAAGTAACC
ACTGTTGATGCAGAGCTTGAATTTCCAATCGCCAGCAATGCAACAGGAAA
ACAACTTTTCGATCAAGTCGTCAAAACAATTGGCATTCGTGAAATCTGGT
TCTTCGGCCTACAATATGAAGATGGTAAAGGCTACACAGCATGGTTGAAA
CTAAACAAAAAAGTCTCTGCACAGGATATTAAACGTGAAAGTAAAGACGC
GCCATATGAATTTAAATTCTTAGCCAAATTTCACCCTGAAGAAGTTGAAG
GAGAACTGATTCAAATGATCACACAAAAGTTGTTCTTCTCCCAAGTTAAA
GAAGGTGTTCTCAACGAGACGGTGTACTGTCCACCAGAGACATCTGTCCT
CTTAGCATCATACGCTATGCAAGCTAAATATGGTGATTATGATGAAGCTT
CGTATAAAGTTGGGGATTCTAAAGAGAAATTGTTACCAGAGAAAGTAAAA
GAACAACATAGTTTAACAGATGCGGAATGGGAGGAACGGATCATTCAATG
GTGGAAACAACTTAACGATATGATGAAAGAAGATGCTCGAGTTGAGTACC
TTAAAATTGCACAAGATTTGGAAATGTACGGAGTCAATTATTTCGAAATC
AAAAACAAGAAGGGAACAGAGCTCTTCTTAGGTGTCGACGCACTGGGATT
GAATATTTACGAAAAGGAAGATCGCCTCACACCGAAGATCGGTTTCCCTT
GGAGTGAAATTCGAAACATCTCATTCAGTGACAAGCGATTTAATATCAAA
CCCATTGACAAGAAATCGCCAgattttatCTTTTACGTCACTCGACTTCG
AATCAATAAACGTATCTTATCCTTATGCGTTGGAAATCACGAATTATACA
TGCGCAGACGAAAAGCCGACACCATCGAAGTCCAACaaatgaaatcgaaa
gcgaaagaGGAAAAAGAAGCACGACGCGCCGAACGTAACAAattgaacaa
agaaaaacaagctAGAGAGGACGCGGAAAGAGAAAAGAAAGAATTGGAAG
CTCGTCTAAAACAGTTTGAAGAAGAAGCAAGattagcACAGGAGGCTCTT
GACAAAGCGAAAGCAGAGGCGGAAGACAAAGAACGAAGGCGGAAAGAGGC
GGAAGAAGAAGCTGCCCGTTTACAACAACTCAAACTAGAAGCTGAAGAAG
AACGAAAAAAACTTGAAGAAGAAGCTGCAAACGATCGTATCGAGCGTGAA
GAATACGAACAACGCTTGGAGGCCGCACGCTTAGAAGCTGAAAGTCGTGC
AGCACAGATCGAAGAGAAACAAAAAGAAGCTGAAAAGTTACAACAAGAAT
TGGCTGAATCTCAACAACGagaagaagaacaaaaacaaGAATTACTGAAG
ATCATTTCAACACCACCAGCAGCTATGGTGGAAACGGATGAAGGTGATGA
AGATGCTGAGAATGTTGGTAAAGATTTCGAAGAAGGAGAAAATGATAACA
GAGAACTAGAATATACATCTGCTGCTGATAAAAATGATACGTTACGTGCT
CAACTGAAGtctcttggtGAAGAATTGAATTTGGCAAGAGATGAAGGAAA
ATTATCACGTGAAGATTTGTTGCACGAAGGAAACTTGAAAGAAGGTCGTG
ATAAATACAAAACActtcgacaaattcgacaagGAAACACAAGACAACGT
ATTGATGAATTCGAATGCATGTAAACATTCAAGATTCATGatagtttttt
tgtttatgtttgtttGTGTCACGTCAAAGTCAACAATCGTTTTTCAATCA
GGTTGTAGCAGCTTCATGTATCCTCATGTATCCCCTGTGTTTTAATTGGT
GAGGACGATTAGTTTTTCAATTATACAGATTCCAGCAGGCTGAGGAGTAA
GCGGGGAGTAAGTCAGCGCTATCACCCTCGAACTTGCTGGTCAAAACTGT
TGGTTGTTTCAAACCATTTCAGTTGCTCCTCCGACTTCAAAAGGgtagat
acataaactcgcaaGTTATTAGGTTTGTGGTAGAAGCTTTGACTTACCTT
GCTTAACTGTATCGGTGATTGCCAGCAGTAAAAGAAGCTTAACTATCAAA
AGCTAATCCCACCCAAAGCATGTATTATGGGGgaggtttcagggggtacc
cgattccgcaagtccgtcaattttttctccaatttccgtcaaaccgtctt
aaattgaaccaaaattccgtcaccgaaaattcctttgaaattcaatattt
ttgtcgaaaattccgcaaattttgaatatcttttactaattccgaaattc
cgcaaatctTTTTGctaattccgtttttccgcactaaaattgtctaattt
tccgtctccgtcagagaacccaatttccgtaattccgtctgagttttcgc
caaattccgccactccgtccgaaaaaagggccgattccgctcctccgcca
accatgaaaccccccccctatTATTGCAACTTCAAACGCGCCAATCTTTC
ATGTTGGACCAGGACATCAAAACAACTTGGGTTTATTTATATTTGAGAAT
TTCAAATGACAAACCTATTTCGTTTGCTGTAAAGTTGTTAGAAATTTTCC
TGTTTCATGTTTACCGTTTTTCGTTTCTTTGAATGTaaatatttttcctt
tattttatattatttggATGTGCTGATTTAGATGTCTTTCCTCATCTGAA
AAAAAGTAGCCTTACTATTTCATTGATGagatataaaaacaaacttgtca
aattatttttacacattataaattatttttagtcGTATTGATAAGAAGAA
TAAATTCTATTATTTTCATG
Run BLAST on NCBI

transcript from alignment at scaffold_36:597199..605012+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061568 ID=TCONS_00061568|Name=TCONS_00061568|organism=Clytia hemisphaerica|type=transcript|length=7814bp|location=Sequence derived from alignment at scaffold_36:597199..605012+ (Clytia hemisphaerica)
GTCGTTATAAAGGAAAGACGAAAACAGCATTCTGCTTGATCAAGGCAAAG
AATCGAATTTTGAGAGCTGACTGATTGATAAAAAGTTCATACCAACATGC
AAATCAAAGCCAAAGTTGACAAAACACCGAAAGTAAGATTAAAATCAATA
GTAATtgtgatttgattttgttgtatTTAACTGGTTCTAGCTCTTGTCAA
AACTTCTGGAGTgagtttgattttgttgtgtttAAATGGCTCTTGCTGCA
AAGTCGCCATGAAGTCGCCATGAAGTCGTGATATGGATAACTTATGATGT
GTTTCTTTTTGCCGGTTGTTGATTTTCAGTACTTTTTAATTGCTACTAAT
TGCTTAGTTTTACTTTCTAGTGAAGTATCTGATTACTTGAGGGGCTAATT
GCATGATACTGCTTATCAGAGCTTTAGATCATATGTtttatcatgaacat
ataaacgactggacaccCATCtcatttgtctttttgtagaaagggctgct
agcttcgttgccgcctcgttaaaagcataaaatgaaacaatagattttga
tgatataccacttgggagtaCCTTGCTAGCAACGTcgaaacttcgacaaa
agtctctgttgttctactcttctcaagtcttttatctataccataacaaa
gataacagaggcaaaatcttcgtcagcttgtcaaaactccggctaatatt
tctaaattttgacttaaaagtgtctaataattttagagagtgtcgcattc
taattttgatattcttatgacacagtctctaaactttggcaagctatttt
ttcaagtcataaaaaaaattattggagtgacaaaagggattcaaaagtat
acacgcagttgaaattctgcattttagagttgaaaatattgatgaaatat
attacaaacttgtaaaaaaattcgaaaataatttttttgtccattaggag
taatgttcaagctctatcaatctttttacctaaataattcaaagaaataa
aattatgacagaatattgtcggatttttcatacaaattttgaaaaacagg
cggcaacgaagctcgcttcaaagaggcaataaaagatagatgtccagtcg
tttatatgttcatggttttaTACATAGGAAAAATAGATCATGTAGGGATG
ATTTTGGGGCGCAATTTTTcttacattgaatttcgaatcaAAAACAAAGC
CAATTCTCCAGTGGGTCTGGGATTGTAGGGAATTTTTCCCATCATTAACG
AATAAATTTTTGCCAGATTCTCTAGCGGGGCGGGCCTCCTACCGTGTCTA
TGACAAAGGGGTGTATTTGAGAAAACTCATGGCTCCGtttcctaaaaata
tatttaaaggtaacttttttcactgattttctgattttcatcGATAGTTA
AGTTAATGTTATCTTTTAAAAACGAACCACAGAGACCTTGTTTGgaaaca
ttttgaaagttttgcaaaattaaagtttgaagacaaatcacgcttttact
caaAATTGTATGTGCTTGTtagacatttatttctgattggttcgaattta
ttgtcACTAATAAAgctatcagctgtaagttgtaaagcaagtaacatggt
aataaaatcacgtgaactttttcgagtaatcacatgttgtGACTATGCAT
TGCAATCCGTGTATTACTTGTACCCAGATCCACTTGCACCAAATTTTAAT
TCTACTGATTGGCCTATAGCgctatcaaaatcatgaaaagtgAAACATGA
ACTGGGAATGActtcaaaacattttatttCTCNTATAGCgctatcaaaat
catgaaaagtgAAACATGAACTGGGAATGActtcaaaacattttgtttcT
CTTTTAGACCAACGTTAAAGTAACCACTGTTGATGCAGAGCTTGAATTTC
CAATCGCCAGCAATGCAACAGGAAAACAACTTTTCGATCAAGTCGTCAAA
ACAATTGGCATTCGTGAAATCTGGTTCTTCGGCCTACAATATGAAGATGG
TAAAGGCTACACAGCATGGTTGAAACTAAACAAAAAAGTCTCTGCACAGG
ATATTAAACGTGAAAGTAAAGACGCGCCATATGAATTTAAATTCTTAGCC
AAATTTCACCCTGAAGAAGTTGAAGGAGAACTGATTCAAATGATCACACA
AAAGTTGTTCTTCTCCCAAGTTAAAGAAGGTATTTATGGGTTTTAAACTT
GCCTCAGTTCAACATTGTCTACTAGACCTAAGAGTACCTGCTCTTACACC
CCTATCAGTCCAACATTGACAgggaatttgattttgaaaaatttctttcg
tAGAATAAATCACTTAttccaaagaacattttaaatatataaatctaATC
CGAGTTTACCTTCTTATACAATTTaataaatatgaaatatttCGGACACA
GTCAGTCATCAAATCCTTATGTTATTAGCGCGATTAAGAATCCGGGACGA
ATGTCACCCAGGAGTTACCCTTGAAGTAGAATCGATTCTTGCTAGTGGAA
ACTCTCTTGTTTTTCCTTACTAAAGACAATTTTAAGGATACATCCAAACG
TGGTAAGATATAAACTATTTTCGCTTTCTAGGTGTTCTCAACGAGACGGT
GTACTGTCCACCAGAGACATCTGTCCTCTTAGCATCATACGCTATGCAAG
CTAAATATGGTGATTATGATGAAGCTTCGTATAAAGTTGGGGATTCTAAA
GAGAAATTGTTACCAGAGAAAGTAAAAGAACAACATAGTTTAACAGATGC
GGAATGGGAGGAACGGATCATTCAATGGTGGAAACAACTTAACGATATGA
TGAAGTAAGTGTCAAAGGAATTGCCAAGATCTGTCTCTAAGATTTGTCGA
CCTGGCATTGTATATTGATAACAATATTGATGAGCAATACAAAATTGTAT
TATTATCTTTCTAAGATAAAAGTTACAGCCTTGTGTAGAAGGTATACTAA
TAGAGACCAAATTTTGCTCAACGGTATTGAAAAAGCATACGAATTTTTTG
CTTCAGTTTATTATTTCTGGGTTCAATTCCTTTATCAAGGATCAAGCTCC
AAAATTTCTTGTCACATACTAAATTGGCCTGAAAATGGTTGCTTGAAGAT
CCGAAATATTCTGTAATAATAACATTCTTTGATTTTCGAGCTTTAAAATC
TGAAGTTGTACTTAacttacaattttcaaaatttcttttgctacTAGAGA
AGATGCTCGAGTTGAGTACCTTAAAATTGCACAAGATTTGGAAATGTACG
GAGTCAATTATTTCGAAATCAAAAACAAGAAGGGAACAGAGCTCTTCTTA
GGTGTCGACGCACTGGGATTGAATATTTACGAAAAGGAAGATCGCCTCAC
ACCGAAGATCGGTTTCCCTTGGAGTGAAATTCGAAACATCTCATTCAGTG
ACAAGCGATTTAATATCAAACCCATTGACAAGAAATCGCCAGTAAGAACG
CCTTTTCTATAACTTGTTAAAAGAAAGCAGATATCATAACCCGGgtgggg
gcactcaaggtaaatacGTGGAgcccttaagggtatattttccaagcttc
ctaaagtgcactgtaagggtagaaatgaGCAAAGGAGGTATGCAGCAAac
atgagaaaaattgcacacAAGGGTGATCTGATCATAtttcgagtgccccc
cccccctctccgGGTATGATAAATACGATGGAAAGGTTTTGAATGTGTAT
TTTTTAGCAATAGTCATGGGATAATCTAATACTATTAGGACTGATTCTAA
TCGAAAGTAAACAATCTTATCCGTGAATAATATCAAAATTCAGAGTCagt
gaaatataaaaatttctaatttcggTGAGAGTTAATTTCGCAGGAAAATG
ATCAATCAATTTAATTTCGGCGGGAAAAATTGTTAACGAATCTTTTAAGT
GAATCAGCAATAGTTTTCTTCTCTCAAAGTATGATTTTGATTGACAAGAA
TTGAGGTCGTTGAtggttttgtgatttttttcaggattttatCTTTTACG
TCACTCGACTTCGAATCAATAAACGTATCTTATCCTTATGCGTTGGAAAT
CACGAATTATACATGCGCAGACGAAAAGCCGACACCATCGAAGTCCAACa
aatgaaatcgaaagcgaaagaGGAAAAAGAAGCACGACGCGCCGAACGTA
ACAAattgaacaaagaaaaacaagctAGAGAGGACGCGGAAAGAGAAAAG
AAAGAATTGGAAGCTCGTCTAAAACAGTTTGAAGAAGAAGCAAGGtatgc
aaacaaaaaaaaatagaatgcCAAAATGATCTTTCATCCAACTCCGATGC
TTACAAATTTTGCTTGAGACCCTTAAGTGCCGCATGAACACTTTCGATTG
TGATTGACGGCATTTTAGTAATACAGACGCGCGGGCTCGTTGACGCGGAT
TCTTTTCTCATTGAATTTGCACATGTTTTTGCATGGTTTCTTTAAACGGT
ATTGGACACTTCAGCTCGTCaattctttgccacggaaagtcatgtgacat
ctttttcaaccaataagatctAATGatttcgagggtaaaacaaacaTTAT
GGTTTaaactcactaaaagattatgtttactgaaaacacataattaatct
ttagtaagtgCTCTGTTGTACCACAGCtctgacgtcatgccgtggcGAAG
AATGCTTTAACAACCAAGTATTACTTCCTATGTAACGATAGTGAGTTGTT
ATTAGCCATATAGTTGCTTTATCCTGTTGCATGGATCAAGTTCCCAAATT
TCTTGTCATTTCTCAGTTGACTTGGAAAAGGGTTCTGAACGATCCGAAAT
TTCtttacatgaaaatattttttttaattgaaaaatacaattttgtatat
gaacttaaaaaattaaatgttaaatctctaaatattttcagattagcACA
GGAGGCTCTTGACAAAGCGAAAGCAGAGGCGGAAGACAAAGAACGAAGGC
GGAAAGAGGCGGAAGAAGAAGCTGCCCGTTTACAACAACTCAAACTAGAA
GCTGAAGAAGAACGAAAAAAGTGAGAGCTtttacttctttttcttttcta
aacgaGGTCTCATGATTTCGCTTTGTAAGTTTGGACTGAAGAGCTGTCCA
GCGGCAAAACGTTTCAAATTTATACGATTTCTTTGGACAACATAGATGTT
GGCACCTTAAAAGGGTCCCGATTCACTTTTTATTCCCTCGCTGGCCAAtc
caaaaagaatcaaattgtCGGCCCTTCTAAAAATGAATGTATTCCTCCAC
AGACTTGAAGAAGAAGCTGCAAACGATCGTATCGAGCGTGAAGAATACGA
ACAACGCTTGGAGGCCGCACGCTTAGAAGCTGAAAGTCGTGCAGCACAGA
TCGAAGAGAAACAAAAAGAAGCTGAAAAGTTACAACAAGAATTGGCTGAA
TCTCAACAACGagaagaagaacaaaaacaagTAAGTGGCCATAAGAGTAG
AAAGTAGAGTATCCGGCTAAGGTGCGCAAGCGTTGTGGGTTCGACTTTTA
GCCGGGTTAtaccaaaatggtacttgatgacTCTCTGCTTGTTGCTCAGC
AACTTAGGAGAcgaatcaagggtaagtggagaaatccacgGAGTTGCGCC
CTCCCATATCTACACGCTCAGAGAAAAGAGAAGCTTTGGGTCGCCCTCGA
TTGCTTATAGATCACAACCTGCTCTGTTTGCATATTAGCCCATTGAAGGT
TAAACCGGATGAGCATCCTCATTATCCTAACCAGTTACTGGGGCTGCTAC
TGAGTGGGTTTTGTGACGCTACTCCAAACTATCAGgattttttcaatata
tatGTTGAAAACCTTTGGGTTTGTGTAGTTACTATGGTCAAACCTCATCA
ATATCAATTGGTTGCCAATGAACGCTTGCAGAAGGTGGTTATGGAAGAGA
ATTTTCGACTGAATCCTTAGAGATCCTTTTTTGACTCTgctttgtttatc
ttttaatAATAAAATCGTTCTTGATCTTAGGAATTACTGAAGATCATTTC
AACACCACCAGCAGCTATGGTGGAAACGGATGAAGGTGATGAAGATGCTG
AGAATGTTGGTAAAGATTTCGAAGAAGGAGAAAATGATAACAGAGAACTA
GAATATACATCTGCTGCTGATAAAAATGATACGTTACGTGCTCAACTGAA
GGTAATTGTGATTCTTTTGAATTCCTTACTTAATGTGTgactcttttttg
tttttaatacaCCATCagtgattttaatttttctttgatcGTCTAAAGAA
ACCCTTTTAATTCGTGAACTGTCTAATTTCTTTTACCCAAAAAAGCAGTA
TTTAATCTAATGCCTTTCCATGGTATCCTCGAACCTAAATTTGCCCTTCT
TAAAGGAAAATTAgaccagctggcacacaacgttgtttcaacgtttttct
aacgttcacaacgttcatataacgttagaaaatcgttgaaacaacattgt
gtgccagctgggagaaTGCTTTTATATAATGAATGTAAGGAATTCGATAT
TAGCTGGCTCATGATTTGGTATAATATTCTTTCACTTTTAATttcgtttt
tagtctcttggtGAAGAATTGAATTTGGCAAGAGATGAAGGAAAATTATC
ACGTGAAGATTTGTTGCACGAAGGAAACTTGAAAGAAGGTCGTGATAAAT
ACAAAACActtcgacaaattcgacaagGAAACACAAGACAACGTATTGAT
GAATTCGAATGCATGTAAACATTCAAGATTCATGatagtttttttgttta
tgtttgtttGTGTCACGTCAAAGTCAACAATCGTTTTTCAATCAGGTTGT
AGCAGCTTCATGTATCCTCATGTATCCCCTGTGTTTTAATTGGTGAGGAC
GATTAGTTTTTCAATTATACAGATTCCAGCAGGCTGAGGAGTAAGCGGGG
AGTAAGTCAGCGCTATCACCCTCGAACTTGCTGGTCAAAACTGTTGGTTG
TTTCAAACCATTTCAGTTGCTCCTCCGACTTCAAAAGGgtagatacataa
actcgcaaGTTATTAGGTTTGTGGTAGAAGCTTTGACTTACCTTGCTTAA
CTGTATCGGTGATTGCCAGCAGTAAAAGAAGCTTAACTATCAAAAGCTAA
TCCCACCCAAAGCATGTATTATGGGGgaggtttcagggggtacccgattc
cgcaagtccgtcaattttttctccaatttccgtcaaaccgtcttaaattg
aaccaaaattccgtcaccgaaaattcctttgaaattcaatatttttgtcg
aaaattccgcaaattttgaatatcttttactaattccgaaattccgcaaa
tctTTTTGctaattccgtttttccgcactaaaattgtctaattttccgtc
tccgtcagagaacccaatttccgtaattccgtctgagttttcgccaaatt
ccgccactccgtccgaaaaaagggccgattccgctcctccgccaaccatg
aaaccccccccctatTATTGCAACTTCAAACGCGCCAATCTTTCATGTTG
GACCAGGACATCAAAACAACTTGGGTTTATTTATATTTGAGAATTTCAAA
TGACAAACCTATTTCGTTTGCTGTAAAGTTGTTAGAAATTTTCCTGTTTC
ATGTTTACCGTTTTTCGTTTCTTTGAATGTaaatatttttcctttatttt
atattatttggATGTGCTGATTTAGATGTCTTTCCTCATCTGAAAAAAAG
TAGCCTTACTATTTCATTGATGagatataaaaacaaacttgtcaaattat
ttttacacattataaattatttttagtcGTATTGATAAGAAGAATAAATT
CTATTATTTTCATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038632XLOC_038632Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061568-exon-scaffold_36-1491911889:597199..597330TCONS_00061568-exon-scaffold_36-1491911889:597199..597330Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1510915933:597199..597330TCONS_00061568-exon-scaffold_36-1510915933:597199..597330Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1575043694:597199..597330TCONS_00061568-exon-scaffold_36-1575043694:597199..597330Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1491911889:599056..599377TCONS_00061568-exon-scaffold_36-1491911889:599056..599377Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1510915933:599056..599377TCONS_00061568-exon-scaffold_36-1510915933:599056..599377Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1575043694:599056..599377TCONS_00061568-exon-scaffold_36-1575043694:599056..599377Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1491911889:599780..600002TCONS_00061568-exon-scaffold_36-1491911889:599780..600002Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1510915933:599780..600002TCONS_00061568-exon-scaffold_36-1510915933:599780..600002Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1575043694:599780..600002TCONS_00061568-exon-scaffold_36-1575043694:599780..600002Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1491911889:600396..600639TCONS_00061568-exon-scaffold_36-1491911889:600396..600639Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1510915933:600396..600639TCONS_00061568-exon-scaffold_36-1510915933:600396..600639Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1575043694:600396..600639TCONS_00061568-exon-scaffold_36-1575043694:600396..600639Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1491911889:601183..601442TCONS_00061568-exon-scaffold_36-1491911889:601183..601442Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1510915933:601183..601442TCONS_00061568-exon-scaffold_36-1510915933:601183..601442Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1575043694:601183..601442TCONS_00061568-exon-scaffold_36-1575043694:601183..601442Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1491911889:602090..602218TCONS_00061568-exon-scaffold_36-1491911889:602090..602218Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1510915933:602090..602218TCONS_00061568-exon-scaffold_36-1510915933:602090..602218Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1575043694:602090..602218TCONS_00061568-exon-scaffold_36-1575043694:602090..602218Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1491911889:602451..602628TCONS_00061568-exon-scaffold_36-1491911889:602451..602628Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1510915933:602451..602628TCONS_00061568-exon-scaffold_36-1510915933:602451..602628Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1575043694:602451..602628TCONS_00061568-exon-scaffold_36-1575043694:602451..602628Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1491911889:603179..603349TCONS_00061568-exon-scaffold_36-1491911889:603179..603349Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1510915933:603179..603349TCONS_00061568-exon-scaffold_36-1510915933:603179..603349Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1575043694:603179..603349TCONS_00061568-exon-scaffold_36-1575043694:603179..603349Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1491911889:603752..605012TCONS_00061568-exon-scaffold_36-1491911889:603752..605012Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1510915933:603752..605012TCONS_00061568-exon-scaffold_36-1510915933:603752..605012Clytia hemisphaericaexon
TCONS_00061568-exon-scaffold_36-1575043694:603752..605012TCONS_00061568-exon-scaffold_36-1575043694:603752..605012Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:597199..605012 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.65239	1.81215	5.34888	5.83583	5.4143	3.24071	52.0021	40.6414	1.02063	1.66473	5.82266e-10	7.83551e-08	32.2651	15.8287	49.7431	76.8783	12.3722	17.3305	23.5559	7.85441	0.77578	0.0310675	2.81002	2.5614	11.2347	8.85141	1.93237	2.57814	2.88921	0.815961
Blast
[Close]
BLAST of TCONS_00061568 vs. Swiss-Prot (Human)
Match: RADI (Radixin OS=Homo sapiens GN=RDX PE=1 SV=1)

HSP 1 Score: 464.537 bits (1194), Expect = 2.557e-151
Identity = 215/298 (72.15%), Postives = 256/298 (85.91%), Query Frame = 1 
Query:  157 DAELEFPIASNATGKQLFDQVVKTIGIREIWFFGLQYEDGKGYTAWLKLNKKVSAQDIKRESKDAPYEFKFLAKFHPEEVEGELIQMITQKLFFSQVKEGVLNETVYCPPETSVLLASYAMQAKYGDYDEASYKVGD-SKEKLLPEKVKEQHSLTDAEWEERIIQWWKQLNDMMKEDARVEYLKIAQDLEMYGVNYFEIKNKKGTELFLGVDALGLNIYEKEDRLTPKIGFPWSEIRNISFSDKRFNIKPIDKKSPDFIFYVTRLRINKRILSLCVGNHELYMRRRKADTIEVQQMKS 1047
            DAELEF I  N TGKQLFDQVVKT+G+RE+WFFGLQY D KGY+ WLKLNKKV+ QD+K+E+   P +FKF AKF PE+V  ELIQ ITQ+LFF QVKE +LN+ +YCPPET+VLLASYA+QAKYGDY++  +K G  + ++LLP++V EQH LT  +WEERI  W ++   M++ED+ +EYLKIAQDLEMYGVNYFEIKNKKGTEL+LGVDALGLNIYE +D+LTPKIGFPWSEIRNISF+DK+F IKPIDKK+PDF+FY  RLRINKRIL+LC+GNHELYMRRRK DTIEVQQMK+
Sbjct:   13 DAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLKLNKKVTQQDVKKEN---PLQFKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQAKYGDYNKEIHKPGYLANDRLLPQRVLEQHKLTKEQWEERIQNWHEEHRGMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQMKA 307

HSP 2 Score: 92.4337 bits (228), Expect = 3.985e-19
Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 1 
Query: 1531 ETDEGDED-AENVGKDFEEGENDNR-ELEYTSAADKNDTLRAQLKSLGEELNLARDEGKLSREDLLHEGNLKEGRDKYKTLRQIRQGNTRQRIDEFECM 1821
            E DE DE+ AE   +   EG  ++R E E  +   KN+ ++ QL++L  EL  ARDE K ++ D+LH  N+K GRDKYKTLRQIRQGNT+QRIDEFE M
Sbjct:  485 EHDEHDENNAEASAELSNEGVMNHRSEEERVTETQKNERVKKQLQALSSELAQARDETKKTQNDVLHAENVKAGRDKYKTLRQIRQGNTKQRIDEFEAM 583
The following BLAST results are available for this feature:
BLAST of TCONS_00061568 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RADI2.557e-15172.15Radixin OS=Homo sapiens GN=RDX PE=1 SV=1[more]
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