TCONS_00061547 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061547
Unique NameTCONS_00061547
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length142

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061547 ID=TCONS_00061547|Name=TCONS_00061547|organism=Clytia hemisphaerica|type=transcript|length=142bp
CTCCTAACATGTATGTGCATGTAGATACTATATAAGCTAGCCACTAGGTA
GGAGTATGGGGTTCCGAAGGGACCCACACCCCCAAAACGTCCCCAAAACT
ACCCGCACAATACATCCCCAAATCAGCAgccaaactcaaaaa
Run BLAST on NCBI

transcript from alignment at scaffold_359:210099..210240

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061547 ID=TCONS_00061547|Name=TCONS_00061547|organism=Clytia hemisphaerica|type=transcript|length=142bp|location=Sequence derived from alignment at scaffold_359:210099..210240 (Clytia hemisphaerica)
tttttgagtttggcTGCTGATTTGGGGATGTATTGTGCGGGTAGTTTTGG
GGACGTTTTGGGGGTGTGGGTCCCTTCGGAACCCCATACTCCTACCTAGT
GGCTAGCTTATATAGTATCTACATGCACATACATGTTAGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038617XLOC_038617Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061547-exon-scaffold_359-1491911889:210099..210240TCONS_00061547-exon-scaffold_359-1491911889:210099..210240Clytia hemisphaericaexon
TCONS_00061547-exon-scaffold_359-1510915933:210099..210240TCONS_00061547-exon-scaffold_359-1510915933:210099..210240Clytia hemisphaericaexon
TCONS_00061547-exon-scaffold_359-1575043694:210099..210240TCONS_00061547-exon-scaffold_359-1575043694:210099..210240Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_359supercontigscaffold_359:210099..210240 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061547 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top