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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061517 ID=TCONS_00061517|Name=TCONS_00061517|organism=Clytia hemisphaerica|type=transcript|length=1159bp
ACAGTCTAGCAATTCGTGGACCTATCGGGAAGTATTTGAATGTTTTGCCA
CTAGATTTCTTTGATCTACAATGTCCATTCATTTAAATTTGCGTGTTCTT
TACGGAAAACGATGCAGTCTTTTTCGCAGGCTCTGGATGTTTGTATGGGA
ATCAAAAAGTCTTTTATGCAAGACTTGGCTTGGTCATAGGATCCAACAGC
TTTATTGTTTTGAGGCAGCTTGAATTTCTTATCCGATCGAAAGCTTTCAG
ACACTGTGGTTTTAACATACCCTGGATGCGAAACAAATTTTCTCAGCTCG
ATAAATATATGATCGAGAACTGAAATATCAGCGCCATCATATAACGGAGT
TTTAGCAGCCCAATGAGTTTCGAACAGTTCAGGATAGTATGGAGTATTTA
CTGAATAAATAGTGTCCTTTTCTTGGGGTGTATTTCTCACATAATGTTTG
GCGTCATCTCGGGCGTGTCTTTGAACTGTTCTCCAGTAACGGATTTGACC
ATTGCATCGATGACTTTTGCAGAAACACTGCTtacctaaaatgaaaacaa
aaagaaaaacctgAATATGTTACATAATaactattatttatttatttttt
caggaattaTATCGAGCACAAGAGCGGTTATTCTATCGTCATTTCAAGCG
AATCACAGAACGCGGTGAAACGAGGAACGAAAAATAAGGATGAATTAATG
ATCCCAAACGGAAAATGATCGCAAATGAACGAGACAAAACAACGTGTGGA
AGAATAATGGTTGTACATCAGTGATGGAAAGAAATTTGATTAAATGATTT
CGATTTGGTGAACGGAAAAATGCAGGAAGGAGCGCACGTTGTCAAAAATC
GAGACCGTAACAGCTGTTTAAGTCCTCTGGATTGATCCCATATCTATTTG
AACATCCATAAAAGACCTCCGCAAAAGTTAGCTTCTTTAAACGAGGAATG
TTTTGTGGTTTTGCAAATTTCGTTAgagggaaatttgtaaaatcgcgcTA
AAAGTATATCCAGATATAATTcacagtggaaacaagaatgtctgtaactt
ttgatagtcaaatataattgccaaaatttttttgcttgtttttagaggat
caaaagcgctatatctgAACATTTTAGgcagaaatttctaaaaaaataac
cacatccag Run BLAST on NCBI transcript from alignment at scaffold_359:56588..57746+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061517 ID=TCONS_00061517|Name=TCONS_00061517|organism=Clytia hemisphaerica|type=transcript|length=1159bp|location=Sequence derived from alignment at scaffold_359:56588..57746+ (Clytia hemisphaerica)
ACAGTCTAGCAATTCGTGGACCTATCGGGAAGTATTTGAATGTTTTGCCA
CTAGATTTCTTTGATCTACAATGTCCATTCATTTAAATTTGCGTGTTCTT
TACGGAAAACGATGCAGTCTTTTTCGCAGGCTCTGGATGTTTGTATGGGA
ATCAAAAAGTCTTTTATGCAAGACTTGGCTTGGTCATAGGATCCAACAGC
TTTATTGTTTTGAGGCAGCTTGAATTTCTTATCCGATCGAAAGCTTTCAG
ACACTGTGGTTTTAACATACCCTGGATGCGAAACAAATTTTCTCAGCTCG
ATAAATATATGATCGAGAACTGAAATATCAGCGCCATCATATAACGGAGT
TTTAGCAGCCCAATGAGTTTCGAACAGTTCAGGATAGTATGGAGTATTTA
CTGAATAAATAGTGTCCTTTTCTTGGGGTGTATTTCTCACATAATGTTTG
GCGTCATCTCGGGCGTGTCTTTGAACTGTTCTCCAGTAACGGATTTGACC
ATTGCATCGATGACTTTTGCAGAAACACTGCTtacctaaaatgaaaacaa
aaagaaaaacctgAATATGTTACATAATaactattatttatttatttttt
caggaattaTATCGAGCACAAGAGCGGTTATTCTATCGTCATTTCAAGCG
AATCACAGAACGCGGTGAAACGAGGAACGAAAAATAAGGATGAATTAATG
ATCCCAAACGGAAAATGATCGCAAATGAACGAGACAAAACAACGTGTGGA
AGAATAATGGTTGTACATCAGTGATGGAAAGAAATTTGATTAAATGATTT
CGATTTGGTGAACGGAAAAATGCAGGAAGGAGCGCACGTTGTCAAAAATC
GAGACCGTAACAGCTGTTTAAGTCCTCTGGATTGATCCCATATCTATTTG
AACATCCATAAAAGACCTCCGCAAAAGTTAGCTTCTTTAAACGAGGAATG
TTTTGTGGTTTTGCAAATTTCGTTAgagggaaatttgtaaaatcgcgcTA
AAAGTATATCCAGATATAATTcacagtggaaacaagaatgtctgtaactt
ttgatagtcaaatataattgccaaaatttttttgcttgtttttagaggat
caaaagcgctatatctgAACATTTTAGgcagaaatttctaaaaaaataac
cacatccag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061517-exon-scaffold_359-1491911889:56588..57746 | TCONS_00061517-exon-scaffold_359-1491911889:56588..57746 | Clytia hemisphaerica | exon |
| TCONS_00061517-exon-scaffold_359-1510915933:56588..57746 | TCONS_00061517-exon-scaffold_359-1510915933:56588..57746 | Clytia hemisphaerica | exon |
| TCONS_00061517-exon-scaffold_359-1575043694:56588..57746 | TCONS_00061517-exon-scaffold_359-1575043694:56588..57746 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_359 | supercontig | scaffold_359:56588..57746 + |
Blast
The following BLAST results are available for this feature:
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