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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061512 ID=TCONS_00061512|Name=TCONS_00061512|organism=Clytia hemisphaerica|type=transcript|length=861bp
Tgttgaagcgccatgatgagacgttgaagcgccatgatgagacgttgaag
cgccatgataagacgttgaagcgccatgatgagacgttgaagcgccatga
tgagacgtaGAAATGTCTTGTTCAGGCAGCGGAGCGTCTTGTTCAGGCGG
CGGAGCGTCATGTTCAGGCGGCGGAGCGTCATGTTCAGGCGGCGGAGCGT
CATGTTCAGGCGGCGGAGCGTCATGTTCAGGCGGTGGAGCGTCATGTTCA
GGCGGCGGAGCGTCATGTTCAGGCGGCGGAGCATCATGTTCAGGCGGCGG
AGCGTCATGTTCAAGTAGCAGAGCATCATGTTCAAACGATGGAACATCAT
GGTTAAACAACAGAATGTCATGTTGAGGCGACGAAAGGTTATGATGAGAT
GATGAAACGCTATCTTGAGGTGGGGGTTCATAATGGAATGCTTGTTCATG
AGGGTCATGTCCTAAATTGGAGGCTTGCCTGAGTAACAGAGCATCCATCT
TTGAATCCTCTGACTCTGAAGATTGATCATCCATCGGAAGATTTTGAAAG
ATCAAATTGTATTGTGAGTTTGCGTTAAGTTCGGAATTTGAAGTGGTACG
ATTCCCCGTGACGTTGTAGCAGACGTCCGATTGATTATGTGGAGCGACTA
TAGGTTGTTTGACTTGGGCGGTAGTATCAGGGGATGAATAACTGTCACTT
ACATGATCATTGATAAGTTGTGTCTTTTCACGTACCTGCCCGGTATGATG
GAGTAATCTGTAATCAATTCTCTTGCGTGATCTCTTGCTGTTTGAATGTT
GCATGGAGTTCACCACTGAGGATTCTCGTACTGACGTATATTTGTAATCA
AGGATTCAAAC Run BLAST on NCBI protein sequence of TCONS_00061512-protein >TCONS_00061512-protein ID=TCONS_00061512-protein|Name=TCONS_00061512-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
MQHSNSKRSRKRIDYRLLHHTGQVREKTQLINDHVSDSYSSPDTTAQVKQ
PIVAPHNQSDVCYNVTGNRTTSNSELNANSQYNLIFQNLPMDDQSSESED
SKMDALLLRQASNLGHDPHEQAFHYEPPPQDSVSSSHHNLSSPQHDILLF
NHDVPSFEHDALLLEHDAPPPEHDAPPPEHDAPPPEHDAPPPEHDAPPPE
HDAPPPEHDAPPPEHDAPPPEQDAPLPEQDISTSHHGASTSHHGASTSYH
GASTSHHGASTSHHGAST Run BLAST on NCBI transcript from alignment at scaffold_358:932849..933709 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061512 ID=TCONS_00061512|Name=TCONS_00061512|organism=Clytia hemisphaerica|type=transcript|length=861bp|location=Sequence derived from alignment at scaffold_358:932849..933709 (Clytia hemisphaerica)
GTTTGAATCCTTGATTACAAATATACGTCAGTACGAGAATCCTCAGTGGT
GAACTCCATGCAACATTCAAACAGCAAGAGATCACGCAAGAGAATTGATT
ACAGATTACTCCATCATACCGGGCAGGTACGTGAAAAGACACAACTTATC
AATGATCATGTAAGTGACAGTTATTCATCCCCTGATACTACCGCCCAAGT
CAAACAACCTATAGTCGCTCCACATAATCAATCGGACGTCTGCTACAACG
TCACGGGGAATCGTACCACTTCAAATTCCGAACTTAACGCAAACTCACAA
TACAATTTGATCTTTCAAAATCTTCCGATGGATGATCAATCTTCAGAGTC
AGAGGATTCAAAGATGGATGCTCTGTTACTCAGGCAAGCCTCCAATTTAG
GACATGACCCTCATGAACAAGCATTCCATTATGAACCCCCACCTCAAGAT
AGCGTTTCATCATCTCATCATAACCTTTCGTCGCCTCAACATGACATTCT
GTTGTTTAACCATGATGTTCCATCGTTTGAACATGATGCTCTGCTACTTG
AACATGACGCTCCGCCGCCTGAACATGATGCTCCGCCGCCTGAACATGAC
GCTCCGCCGCCTGAACATGACGCTCCACCGCCTGAACATGACGCTCCGCC
GCCTGAACATGACGCTCCGCCGCCTGAACATGACGCTCCGCCGCCTGAAC
ATGACGCTCCGCCGCCTGAACAAGACGCTCCGCTGCCTGAACAAGACATT
TCtacgtctcatcatggcgcttcaacgtctcatcatggcgcttcaacgtc
ttatcatggcgcttcaacgtctcatcatggcgcttcaacgtctcatcatg
gcgcttcaacA Coding sequence (CDS) from alignment at scaffold_358:932849..933709 >TCONS_00061512 ID=TCONS_00061512|Name=TCONS_00061512|organism=Clytia hemisphaerica|type=CDS|length=804bp|location=Sequence derived from alignment at scaffold_358:932849..933709 (Clytia hemisphaerica)
ATGCAACATTCAAACAGCAAGAGATCACGCAAGAGAATTGATTACAGATT
ACTCCATCATACCGGGCAGGTACGTGAAAAGACACAACTTATCAATGATC
ATGTAAGTGACAGTTATTCATCCCCTGATACTACCGCCCAAGTCAAACAA
CCTATAGTCGCTCCACATAATCAATCGGACGTCTGCTACAACGTCACGGG
GAATCGTACCACTTCAAATTCCGAACTTAACGCAAACTCACAATACAATT
TGATCTTTCAAAATCTTCCGATGGATGATCAATCTTCAGAGTCAGAGGAT
TCAAAGATGGATGCTCTGTTACTCAGGCAAGCCTCCAATTTAGGACATGA
CCCTCATGAACAAGCATTCCATTATGAACCCCCACCTCAAGATAGCGTTT
CATCATCTCATCATAACCTTTCGTCGCCTCAACATGACATTCTGTTGTTT
AACCATGATGTTCCATCGTTTGAACATGATGCTCTGCTACTTGAACATGA
CGCTCCGCCGCCTGAACATGATGCTCCGCCGCCTGAACATGACGCTCCGC
CGCCTGAACATGACGCTCCACCGCCTGAACATGACGCTCCGCCGCCTGAA
CATGACGCTCCGCCGCCTGAACATGACGCTCCGCCGCCTGAACATGACGC
TCCGCCGCCTGAACAAGACGCTCCGCTGCCTGAACAAGACATTTCtacgt
ctcatcatggcgcttcaacgtctcatcatggcgcttcaacgtcttatcat
ggcgcttcaacgtctcatcatggcgcttcaacgtctcatcatggcgcttc
aacA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061512-exon-scaffold_358-1491911889:932849..933709 | TCONS_00061512-exon-scaffold_358-1491911889:932849..933709 | Clytia hemisphaerica | exon |
| TCONS_00061512-exon-scaffold_358-1510915933:932849..933709 | TCONS_00061512-exon-scaffold_358-1510915933:932849..933709 | Clytia hemisphaerica | exon |
| TCONS_00061512-exon-scaffold_358-1575043694:932849..933709 | TCONS_00061512-exon-scaffold_358-1575043694:932849..933709 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_358 | supercontig | scaffold_358:932849..933709 . |
Blast
The following BLAST results are available for this feature:
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