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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061501 ID=TCONS_00061501|Name=TCONS_00061501|organism=Clytia hemisphaerica|type=transcript|length=964bp
TTTTCTACACGTTTCGtcgtttgtttttttaagaacaccCAAAACTTTTA
TTAAAGCCTTTAGATGCtctcaacttttttagtttttagcctaaaatgtt
cttgatatgttcttattttcaccacattttgagtatttttgtccattttt
ctaagaaattaggtgttttagggcgtccgcaaagccttaaaatgttctca
acttgttcttaataatttGGCAATGGAAGCCTTTAtgtttgtttgttctt
ataaagaaacgtgtATTCTAAAAAAGAGTGACAGGGTTAGAAATGTTTAG
GCTTTTACTCTGCTTTGTTCACCTTTACGcttcaatatatttcaacatGT
TATTTTGCACGTTCAAGAACCTTTGATAATAATAATAGGGTGAAGGTAAT
TTGATTTATTGTTCTACTGGAACAACATGgccttaaaaaaatattttaaa
ttaaatattttttacttcaataAGTGTGAAAAGTTAACAGTTCTCTAGAT
TCAGAAAGTTTTTCTCCgagtttctctctttttttggcTTTAGCAAACGC
TAATCTTGAGATGCATTTTAATTTTACAAATTCATCGGTATGTTAGCGGT
AATCAGCTGgtagaacaacaaatcaaattgattTGCCGAACTAATTTATT
TTAATAAAGTTAGATTTATTCCCTGATGTTACCAAATTTTAAGAACACAT
TCAGTTTGTAAACatgtttaaaattaattttcatagGAGGCTGACCAGAT
ATTAGTTTTTTGAACAAAAGGAAGGCTCAATTTGAATCTATTATTTATTG
GGTTTTAATTTTGCAAAGGACAATACTAATTGATCATATTTTTAAAGCCA
TTCGGGCATTTTTCAcgaacaaaattgtttttttcaaaatatgctATTGA
GTctgtataaaataaaattactatgtttgattttttgataaTGATTTTAC
GATAATAGTTTCAG Run BLAST on NCBI transcript from alignment at scaffold_358:399368..400331 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061501 ID=TCONS_00061501|Name=TCONS_00061501|organism=Clytia hemisphaerica|type=transcript|length=964bp|location=Sequence derived from alignment at scaffold_358:399368..400331 (Clytia hemisphaerica)
CTGAAACTATTATCGTAAAATCAttatcaaaaaatcaaacatagtaattt
tattttatacagACTCAATagcatattttgaaaaaaacaattttgttcgT
GAAAAATGCCCGAATGGCTTTAAAAATATGATCAATTAGTATTGTCCTTT
GCAAAATTAAAACCCAATAAATAATAGATTCAAATTGAGCCTTCCTTTTG
TTCAAAAAACTAATATCTGGTCAGCCTCctatgaaaattaattttaaaca
tGTTTACAAACTGAATGTGTTCTTAAAATTTGGTAACATCAGGGAATAAA
TCTAACTTTATTAAAATAAATTAGTTCGGCAaatcaatttgatttgttgt
tctacCAGCTGATTACCGCTAACATACCGATGAATTTGTAAAATTAAAAT
GCATCTCAAGATTAGCGTTTGCTAAAgccaaaaaaagagagaaactcGGA
GAAAAACTTTCTGAATCTAGAGAACTGTTAACTTTTCACACTtattgaag
taaaaaatatttaatttaaaatatttttttaaggcCATGTTGTTCCAGTA
GAACAATAAATCAAATTACCTTCACCCTATTATTATTATCAAAGGTTCTT
GAACGTGCAAAATAACatgttgaaatatattgaagCGTAAAGGTGAACAA
AGCAGAGTAAAAGCCTAAACATTTCTAACCCTGTCACTCTTTTTTAGAAT
acacgtttctttataagaacaaacaaacaTAAAGGCTTCCATTGCCaaat
tattaagaacaagttgagaacattttaaggctttgcggacgccctaaaac
acctaatttcttagaaaaatggacaaaaatactcaaaatgtggtgaaaat
aagaacatatcaagaacattttaggctaaaaactaaaaaagttgagaGCA
TCTAAAGGCTTTAATAAAAGTTTTGggtgttcttaaaaaaacaaacgaCG
AAACGTGTAGAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061501-exon-scaffold_358-1491911889:399368..400331 | TCONS_00061501-exon-scaffold_358-1491911889:399368..400331 | Clytia hemisphaerica | exon |
| TCONS_00061501-exon-scaffold_358-1510915933:399368..400331 | TCONS_00061501-exon-scaffold_358-1510915933:399368..400331 | Clytia hemisphaerica | exon |
| TCONS_00061501-exon-scaffold_358-1575043694:399368..400331 | TCONS_00061501-exon-scaffold_358-1575043694:399368..400331 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_358 | supercontig | scaffold_358:399368..400331 . |
Blast
The following BLAST results are available for this feature:
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