|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061499 ID=TCONS_00061499|Name=TCONS_00061499|organism=Clytia hemisphaerica|type=transcript|length=1066bp
TGGTGATAATTAGATAAGGtacttttcaatagaaattaggtaatcatctt
tttcagtaTCAGCTTAAGAATTCAAGCATTCTTTAAGTTAAATCAGTCCT
TTTACACGACATTATACTAAAATCATGTATATTTAAATTGGGTGATGATT
ATGAATCAAATTTGGACTAATTAAAGACTTACTGAAAGATACCATGACTA
TCACAGGACAATATAAATATGAACTGTGGCGACAAAAATCTGATGCTATT
CAGCACGCATTCAGCGATAAAAAAGTAACCTTGGCTATCAACCAGGAata
aaagcataaaaaagattCAATAAAAGAGAGTCTTCTCAAAATATAGTATT
TAAAGAGCCCTCCTAATGACCAAAAAATGGTCTCTTTCAGAAAAATCCGT
TCATAGGGGGTGAAAGAATAGGAATTAGAATAGAAAattttgtccagggg
tatagaaaaatcctgaaaaactgCCATATCCAGGGGTAAATTTTAGTGTC
CAGGGGTCGATTTGATGCTtttccagggataagaaaaatcGATATGTCAA
GGGGTAGATCATTGAGAAAATAATATCCTCCATCcatatgaaaaaatttc
tttctggaagagcccaactATGTGGTAATGATTTAATTTGCTTGATGAGG
ATATGTGTTCTccatcttcgattctttttaataataataacatgAAATTC
TTATAATTCGTCGTCACAGGTCAACTTTCAGAGAAATCTAAACTGTGGTA
TTCGTGCTACTTTATTagttttcatcaaaaatgttaatattgaaatttgA
GATTTAGTTTTTTTACTTGATTACTTTTAGTTTTAACTTTTAGATTGTAC
CAGTATATACTTAACATTTAATTATGTAAATTACTTTTGCTAAAACTTGA
TGTTTTTTCctacatattttttataaatttttactattttttattgtcta
cccctatatcaggctcggaTAATGCTtggcattctattgttcttaaacaa
tagagccattgctATGCTTATAgaagaaaaacgtgtattctaaattttaa
ttttacaaGTCCGTCA Run BLAST on NCBI transcript from alignment at scaffold_358:334305..335370 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061499 ID=TCONS_00061499|Name=TCONS_00061499|organism=Clytia hemisphaerica|type=transcript|length=1066bp|location=Sequence derived from alignment at scaffold_358:334305..335370 (Clytia hemisphaerica)
TGACGGACttgtaaaattaaaatttagaatacacgtttttcttcTATAAG
CATagcaatggctctattgtttaagaacaatagaatgccaAGCATTAtcc
gagcctgatataggggtagacaataaaaaatagtaaaaatttataaaaaa
tatgtagGAAAAAACATCAAGTTTTAGCAAAAGTAATTTACATAATTAAA
TGTTAAGTATATACTGGTACAATCTAAAAGTTAAAACTAAAAGTAATCAA
GTAAAAAAACTAAATCTcaaatttcaatattaacatttttgatgaaaact
AATAAAGTAGCACGAATACCACAGTTTAGATTTCTCTGAAAGTTGACCTG
TGACGACGAATTATAAGAATTTcatgttattattattaaaaagaatcgaa
gatggAGAACACATATCCTCATCAAGCAAATTAAATCATTACCACATagt
tgggctcttccagaaagaaattttttcatatgGATGGAGGATATTATTTT
CTCAATGATCTACCCCTTGACATATCgatttttcttatccctggaaaAGC
ATCAAATCGACCCCTGGACACTAAAATTTACCCCTGGATATGGcagtttt
tcaggatttttctatacccctggacaaaatTTTCTATTCTAATTCCTATT
CTTTCACCCCCTATGAACGGATTTTTCTGAAAGAGACCATTTTTTGGTCA
TTAGGAGGGCTCTTTAAATACTATATTTTGAGAAGACTCTCTTTTATTGa
atcttttttatgcttttatTCCTGGTTGATAGCCAAGGTTACTTTTTTAT
CGCTGAATGCGTGCTGAATAGCATCAGATTTTTGTCGCCACAGTTCATAT
TTATATTGTCCTGTGATAGTCATGGTATCTTTCAGTAAGTCTTTAATTAG
TCCAAATTTGATTCATAATCATCACCCAATTTAAATATACATGATTTTAG
TATAATGTCGTGTAAAAGGACTGATTTAACTTAAAGAATGCTTGAATTCT
TAAGCTGAtactgaaaaagatgattacctaatttctattgaaaagtaCCT
TATCTAATTATCACCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061499-exon-scaffold_358-1491911889:334305..335370 | TCONS_00061499-exon-scaffold_358-1491911889:334305..335370 | Clytia hemisphaerica | exon |
| TCONS_00061499-exon-scaffold_358-1510915933:334305..335370 | TCONS_00061499-exon-scaffold_358-1510915933:334305..335370 | Clytia hemisphaerica | exon |
| TCONS_00061499-exon-scaffold_358-1575043694:334305..335370 | TCONS_00061499-exon-scaffold_358-1575043694:334305..335370 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_358 | supercontig | scaffold_358:334305..335370 . |
Blast
The following BLAST results are available for this feature:
|
