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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061469 ID=TCONS_00061469|Name=TCONS_00061469|organism=Clytia hemisphaerica|type=transcript|length=2244bp
GGATAAGGTTGGCAAAATTAGCGTTAGGACTAGTGGAAGGATTAAAAGCt
aataaaaaatatgttttgaaaatatggtTTTCTCATAGCAAAAGTTGCTT
TTTGCTCTAAGTTACTTTTTGACTGTTGCTCAGTATTGGAGGAGACTGAA
AAGACTGGTTTTGTACCCCCTTCGTCTTTCGAGGGACTTCTGAGGATGTG
AAAAGGGAGCCTTAATATGGTTCTCGCATACTCgtcacccattttgccta
agttcATAAAGTGACAAAAACAGACccattaaattgttcttaaatataTT
TCTAGAAATTACAAGAATAAACGTTACACAACTTTGTAATCAATTGAGCA
CATATCCCTTGAATTGAAGAATATTGGTAAATATACAAAGAATTCTGGGT
AAAATGACTTTGACAACGATTGAAAAACAAGCCATAATACTAATCTTTTT
GGCTCTCGATTTTACGACATGTGGGCGTTCAGATGGtgttaaaacaaaaa
ataagggtGGAGTAAAATACAAGGCAGAACCGACGCCGAGAAAAAGCGGC
AAGTGCCAAGCAGAAGAAGCGTCAAATCGGACAGCCGAATATCATCGGAG
GCGGGAGGTTAATTTACGCCTTCTTAACCGAATAACATCTGATGGCGTCC
CCGAGGATTGGGATGGAACTTTCCCAAGTGGACCAACGGAAGATTATAAA
CATTTAGTCGAGACAGGACATAAAGTTCAAAAAGAAAGCGTTTTATTCCC
AAAATTGAttgaaaacgAACCAAGATGTCCACGAAACCATTCCAAATCAT
ACTGTGTTCTTTTCAAGTCAATCCCTTTTCCTGAAAAGACCGTATTCCAA
AATGTTGAAATCCGGATAGCCCAAAAAGTCCTCCGGGATAGACGCTCAAG
AGGTAGACACACGTTCTGGGGAGGCCGCCGTGTTAACCCTCATATAATAA
TCCAGCTACTGGATGAAAGGCTAGCCACGCtgaaaacaatgacgtcatat
tttgtTGGACGGGCCCGTAGTGGGACGATCACGATAGCTTTGAAGGACAT
TAAAGATTTAATAAAAGttagtgaaaaatcgaaaagaatgaaaatattTC
ATGCTTATTTGAAATTCACATGTGTTGGATGTTTTTTTGAGCAGAAAAAG
AAGGACTTTAGTTTGGGACTACCTCACATCTGGTACCAAAAACATAATCA
CGTATTAGAGAAAGTTGTTAAAGATTGTGGTCCCGGCTACAAAGGATGCT
GCCTTGAAAATCATTGGCAGGAATTTAAGGAGAGTTATATCGGTTATCCA
AAACGTTACAATATGGGTCGGTGTAGAGGATCGTGCGATGAGCACCACGA
TCTCGATCGTAAGACAATCTCTGAACGTATTATCAAAAATCACGAAGAAG
GGAACTATGTTCATTTATTGAGCGCCATTTTGAATAAGAAAGACTCGAAG
AAAGCGAAACTATGTTGCGTACCTAAATCTTACGGGAAATTACCAGTACT
GTATATGACGAAGCAAAGTTTAACGATGAAAATTGTAGAGAATGTTGTTA
TCACGGAATGTGGATGCGCGTAGGATTATGGGTATTGGTTATTACAATAA
TGCATTCTGGGATCGAGACATTGTGTATCAATTACCCGTCGTACTTTGCA
AACACTTTTTAGAAAACCATTGGTTCTAAGTTTAAGAGAGTCTCAGAAAG
CAAGTGACGATGCTAGAAGGTCAAATAGCAAAACGCAAGACAAGACCAAA
AGAAATAATTTCGTAGCGGATTAATTTTGATGGTATAAAACGATGTACAG
AGATGGCAACTGTCTTTTCGAGGAATAGTTTTTTCCTAGGAGCTTTATCC
GAACGTGCCACGTAAATGTAAAGAAGGACTTTGGAATTGGatagacattt
tcaaaaattacgtcacaaacatcacttgcctcgtattcaaacaatttcca
tggtgattatgtctcttgagacattaaatgatttttttgtgaatagaaag
tagttttaataaaatagaatataaatataaaataataagtTAATCACCTT
GGCATTAATTTCAAAACGAAGCAAGTTATCTATTGTATATCTAATTTAAG
ATTGAATATAATTTACTGTAGAATTGTAACAATTTGACAAACTGGGACAG
TTTTAAACACCGTATTATATATATGTTGGAAATATTGTGAAATGTTCAAA
ATGCCAGAAAATTTTGTATCTtagaaaatctttaacttaaaaac Run BLAST on NCBI protein sequence of TCONS_00061469-protein >TCONS_00061469-protein ID=TCONS_00061469-protein|Name=TCONS_00061469-protein|organism=Clytia hemisphaerica|type=polypeptide|length=389bp
MTLTTIEKQAIILIFLALDFTTCGRSDGVKTKNKGGVKYKAEPTPRKSGK
CQAEEASNRTAEYHRRREVNLRLLNRITSDGVPEDWDGTFPSGPTEDYKH
LVETGHKVQKESVLFPKLIENEPRCPRNHSKSYCVLFKSIPFPEKTVFQN
VEIRIAQKVLRDRRSRGRHTFWGGRRVNPHIIIQLLDERLATLKTMTSYF
VGRARSGTITIALKDIKDLIKVSEKSKRMKIFHAYLKFTCVGCFFEQKKK
DFSLGLPHIWYQKHNHVLEKVVKDCGPGYKGCCLENHWQEFKESYIGYPK
RYNMGRCRGSCDEHHDLDRKTISERIIKNHEEGNYVHLLSAILNKKDSKK
AKLCCVPKSYGKLPVLYMTKQSLTMKIVENVVITECGCA Run BLAST on NCBI transcript from alignment at scaffold_358:792694..796879- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061469 ID=TCONS_00061469|Name=TCONS_00061469|organism=Clytia hemisphaerica|type=transcript|length=4186bp|location=Sequence derived from alignment at scaffold_358:792694..796879- (Clytia hemisphaerica)
GGATAAGGTTGGCAAAATTAGCGTTAGGACTAGTGGAAGGATTAAAAGCT
AATAAAAAATATGTTTTGAAAATATGGTTTTCTCATAGCAAAAGTTGCTT
TTTGCTCTAAGTTACTTTTTGACTGTTGCTCAGTATTGGAGGAGACTGAA
AAGACTGGTTTTGTACCCCCTTCGTCTTTCGAGGGACTTCTGAGGATGTG
AAAAGGGAGCCTTAATATGGTTCTCGCATACTCGTCACCCATTTTGCCTA
AGTTCATAAAGTGACAAAAACAGACCCATTAAATTGTTCTTAAATATATT
TCTAGAAATTACAAGAATAAACGTTACACAACTTTGTAATCAATTGAGCA
CATATCCCTTGAATTGAAGAATATTGGTAAATATACAAAGAATTCTGGGT
AAAATGACTTTGACAACGATTGAAAAACAAGCCATAATACTAATCTTTTT
GGCTCTCGATTTTACGACATGTGGGCGTTCAGATGGTGTTAAAACAAAAA
ATAAGGGTGGAGTAAAATACAAGGCAGAACCGACGCCGAGAAAAAGCGGC
AAGTGCCAAGCAGAAGAAGCGTCAAATCGGACAGCCGAATATCATCGGAG
GCGGGAGGTTAATTTACGCCTTCTTAACCGAATAACATCTGATGGCGTCC
CCGAGGATTGGGATGGAACTTTCCCAAGTGGACCAACGGAAGATTATAAA
CATTTAGTCGAGACAGGACATAAAGTTCAAAAAGAAAGCGTTTTATTCCC
AAAATTGAGTAAGTTGTTTTTTTATCGATCATATTGTTTTGTTTTGTTTA
AACTCGAAACTAGCCCTTTACCGTAATTTCATGCAATGTTGACATACCTT
GTCTTATTCCATCATAGCAATTATCTATTCTGCAAAGAAGTTTAGAGTGA
TTTTTAAGCAGCTTACTCAAAAGATTTTTATGAACATTTAAAAGACTGGA
TGGTTACTATTAACTATGACTGTTAACTATGACAGAATTAGACATAAGGC
TTGTCGGCATTACACTAAGTTATGGTAGTTTGCTTGATTTGTGACTGTGA
AAGTGACCCTTCTTGATCGTTACAAGGCGCCGTTTCTACCAAAATGAACT
TGAATTGACAAAGCGCTGCTTCTTCAAAAACGGACATACAGCACACCACG
GAAAGCGACACAGATCAATGAGAGGCCCGATGCTAGGCCAACAATTTGTA
CCGTAATACGATGTATCGATTTACCTAGATTGCTTAAAAATTCACGATAC
AGCGCATGCGTAATGTGTCAGCTCAGTGATTGCTTTCATCTAACAATTGG
AGCCCGACCAGGTGTACTGTGATTTGGGTTCACAGATACACATTTTTTAT
AAGAACAAACTATATAAGAACATAAGGCTTCGATGGCCAAAATCCTAAGA
GCATGTTAAGAACATTTTAAGATTTTACGGACTCTAAAACACCCAATTTC
TTAGGAAAATGGACAAAAATACTCAAAAATGGCAAAATAAGAATATGTTA
AGAACATTTTTAGGCTTAAATCTCAAAAAGTTAAGAACATCCTAAGGCTT
CAAAAATTTTGGATGTTCTTATAAAAAGATGTGTAGTAATTTAGGTGAAT
CTTTCACATTTTAGTGAATAAGTTAAGATTTTCGCGGTGAATCTATCCTA
AAAGTCAAGGTGACTTTTTAGTTTTTTTTCTTCAGTAAATTAAAATCGAA
AAGAATTGAAGATAGTACGCAAAGGTACTCTCTGCAAAGATCTTAAATTA
CTGATGTATGTCACAATGCGGTTAAAACTCTTATAAAGTTTAGTCGTTGA
GTTGAATTTCAATTTTGAAGAGAATGCTTCCGCCGCCTGTCTCAAGCTTT
AGTATTTTTTTATCTTTGTCATGACACAATAATTGATTCACGTACATTCC
TGTCAGAAGGTTATTTTTTCCAAAAGAATACTGGAAAAACACGAAAAGTA
TGCCATTATTCCAGAATTGACAAATTATTTGGAAGTTAAATGAGGTAAAG
ATTTCCCCTACCGAAATACTGTTCGAACTACTGTTCATTTCCGCACATAC
CTCTACTTCTTGTACCTACGAAAATCTCCAATTTCGTACTCATTACCTCA
AGCAAGCATCCCATCTGACATAGAACACGTTAAATCCCACATTAAATGTG
CGTTAAATTTTAACACTCAAAACGTCTATAGAATGTTAGATAAACGTTGA
GGCAACGTTTTGCGTCAGTGATATTTACTCCAGATAAAATCTATATCTGG
ATCCATCTCTTTGTTTTATCAACCTTACTAATAGGTGCCAGGCCGTGAGA
GAATGCCCTCAGTGCCCGAGGGGTCCGAAAACTGACCCTTAGAGAGACTG
ATTTTTGCTGAAAAGGTGAACCTTAACTGACTTTTTTGAAAATTTTTCTT
TGATTTTTGAAAAAAGTCGTACCCTTAGAGAGAATTTTTACAATTCTTTC
TTTCGAAATCAGAAAAATTTCCTAAAAATCTTGCATTTTCTGACCCTAAT
TTAAAACTTTCTGTTTTTTCCGACCAGAGATTTTGAAAGTCGAAAAAACC
AACCCTTACCATCCGCAAATACCCGGCAACCATTTTTACCTAAGTACCTG
CTCCCCCCCGGGTCTCATTGCCTGGATTTTTCTCCGAAGAGATTGTTCAA
TGAACAATGATGAAATTATTTTAAGAAATCTTTATTTGTTTTTTTTTTAG
TTGAAAACGAACCAAGATGTCCACGAAACCATTCCAAATCATACTGTGTT
CTTTTCAAGTCAATCCCTTTTCCTGAAAAGACCGTATTCCAAAATGTTGA
AATCCGGATAGCCCAAAAAGTCCTCCGGGATAGACGCTCAAGAGGTAGAC
ACACGTTCTGGGGAGGCCGCCGTGTTAACCCTCATATAATAATCCAGCTA
CTGGATGAAAGGCTAGCCACGCTGAAAACAATGACGTCATATTTTGTTGG
ACGGGCCCGTAGTGGGACGATCACGATAGCTTTGAAGGACATTAAAGATT
TAATAAAAGTTAGTGAAAAATCGAAAAGAATGAAAATATTTCATGCTTAT
TTGAAATTCACATGTGTTGGATGTTTTTTTGAGCAGAAAAAGAAGGACTT
TAGTTTGGGACTACCTCACATCTGGTACCAAAAACATAATCACGTATTAG
AGAAAGTTGTTAAAGATTGTGGTCCCGGCTACAAAGGATGCTGCCTTGAA
AATCATTGGCAGGAATTTAAGGAGAGTTATATCGGTTATCCAAAACGTTA
CAATATGGGTCGGTGTAGAGGATCGTGCGATGAGCACCACGATCTCGATC
GTAAGACAATCTCTGAACGTATTATCAAAAATCACGAAGAAGGGAACTAT
GTTCATTTATTGAGCGCCATTTTGAATAAGAAAGACTCGAAGAAAGCGAA
ACTATGTTGCGTACCTAAATCTTACGGGAAATTACCAGTACTGTATATGA
CGAAGCAAAGTTTAACGATGAAAATTGTAGAGAATGTTGTTATCACGGAA
TGTGGATGCGCGTAGGATTATGGGTATTGGTTATTACAATAATGCATTCT
GGGATCGAGACATTGTGTATCAATTACCCGTCGTACTTTGCAAACACTTT
TTAGAAAACCATTGGTTCTAAGTTTAAGAGAGTCTCAGAAAGCAAGTGAC
GATGCTAGAAGGTCAAATAGCAAAACGCAAGACAAGACCAAAAGAAATAA
TTTCGTAGCGGATTAATTTTGATGGTATAAAACGATGTACAGAGATGGCA
ACTGTCTTTTCGAGGAATAGTTTTTTCCTAGGAGCTTTATCCGAACGTGC
CACGTAAATGTAAAGAAGGACTTTGGAATTGGATAGACATTTTCAAAAAT
TACGTCACAAACATCACTTGCCTCGTATTCAAACAATTTCCATGGTGATT
ATGTCTCTTGAGACATTAAATGATTTTTTTGTGAATAGAAAGTAGTTTTA
ATAAAATAGAATATAAATATAAAATAATAAGTTAATCACCTTGGCATTAA
TTTCAAAACGAAGCAAGTTATCTATTGTATATCTAATTTAAGATTGAATA
TAATTTACTGTAGAATTGTAACAATTTGACAAACTGGGACAGTTTTAAAC
ACCGTATTATATATATGTTGGAAATATTGTGAAATGTTCAAAATGCCAGA
AAATTTTGTATCTTAGAAAATCTTTAACTTAAAAAC Coding sequence (CDS) from alignment at scaffold_358:792694..796879- >TCONS_00061469 ID=TCONS_00061469|Name=TCONS_00061469|organism=Clytia hemisphaerica|type=CDS|length=2340bp|location=Sequence derived from alignment at scaffold_358:792694..796879- (Clytia hemisphaerica)
TTGAAAACGAACCAAGATGTCCACGAAACCATTCCAAATCATACTGTGTT
CTTTTCAAGTCAATCCCTTTTCCTGAAAAGACCGTATTCCAAAATGTTGA
AATCCGGATAGCCCAAAAAGTCCTCCGGGATAGACGCTCAAGAGGTAGAC
ACACGTTCTGGGGAGGCCGCCGTGTTAACCCTCATATAATAATCCAGCTA
CTGGATGAAAGGCTAGCCACGCTGAAAACAATGACGTCATATTTTGTTGG
ACGGGCCCGTAGTGGGACGATCACGATAGCTTTGAAGGACATTAAAGATT
TAATAAAAGTTAGTGAAAAATCGAAAAGAATGAAAATATTTCATGCTTAT
TTGAAATTCACATGTGTTGGATGTTTTTTTGAGCAGAAAAAGAAGGACTT
TAGTTTGGGACTACCTCACATCTGGTACCAAAAACATAATCACGTATTAG
AGAAAGTTGTTAAAGATTGTGGTCCCGGCTACAAAGGATGCTGCCTTGAA
AATCATTGGCAGGAATTTAAGGAGAGTTATATCGGTTATCCAAAACGTTA
CAATATGGGTCGGTGTAGAGGATCGTGCGATGAGCACCACGATCTCGATC
GTAAGACAATCTCTGAACGTATTATCAAAAATCACGAAGAAGGGAACTAT
GTTCATTTATTGAGCGCCATTTTGAATAAGAAAGACTCGAAGAAAGCGAA
ACTATGTTGCGTACCTAAATCTTACGGGAAATTACCAGTACTGTATATGA
CGAAGCAAAGTTTAACGATGAAAATTGTAGAGAATGTTGTTATCACGGAA
TGTGGATGCGCGTAGATGACTTTGACAACGATTGAAAAACAAGCCATAAT
ACTAATCTTTTTGGCTCTCGATTTTACGACATGTGGGCGTTCAGATGGTG
TTAAAACAAAAAATAAGGGTGGAGTAAAATACAAGGCAGAACCGACGCCG
AGAAAAAGCGGCAAGTGCCAAGCAGAAGAAGCGTCAAATCGGACAGCCGA
ATATCATCGGAGGCGGGAGGTTAATTTACGCCTTCTTAACCGAATAACAT
CTGATGGCGTCCCCGAGGATTGGGATGGAACTTTCCCAAGTGGACCAACG
GAAGATTATAAACATTTAGTCGAGACAGGACATAAAGTTCAAAAAGAAAG
CGTTTTATTCCCAAAATTGATTGAAAACGAACCAAGATGTCCACGAAACC
ATTCCAAATCATACTGTGTTCTTTTCAAGTCAATCCCTTTTCCTGAAAAG
ACCGTATTCCAAAATGTTGAAATCCGGATAGCCCAAAAAGTCCTCCGGGA
TAGACGCTCAAGAGGTAGACACACGTTCTGGGGAGGCCGCCGTGTTAACC
CTCATATAATAATCCAGCTACTGGATGAAAGGCTAGCCACGCTGAAAACA
ATGACGTCATATTTTGTTGGACGGGCCCGTAGTGGGACGATCACGATAGC
TTTGAAGGACATTAAAGATTTAATAAAAGTTAGTGAAAAATCGAAAAGAA
TGAAAATATTTCATGCTTATTTGAAATTCACATGTGTTGGATGTTTTTTT
GAGCAGAAAAAGAAGGACTTTAGTTTGGGACTACCTCACATCTGGTACCA
AAAACATAATCACGTATTAGAGAAAGTTGTTAAAGATTGTGGTCCCGGCT
ACAAAGGATGCTGCCTTGAAAATCATTGGCAGGAATTTAAGGAGAGTTAT
ATCGGTTATCCAAAACGTTACAATATGGGTCGGTGTAGAGGATCGTGCGA
TGAGCACCACGATCTCGATCGTAAGACAATCTCTGAACGTATTATCAAAA
ATCACGAAGAAGGGAACTATGTTCATTTATTGAGCGCCATTTTGAATAAG
AAAGACTCGAAGAAAGCGAAACTATGTTGCGTACCTAAATCTTACGGGAA
ATTACCAGTACTGTATATGACGAAGCAAAGTTTAACGATGAAAATTGTAG
AGAATGTTGTTATCACGGAATGTGGATGCGCGTAGATGACTTTGACAACG
ATTGAAAAACAAGCCATAATACTAATCTTTTTGGCTCTCGATTTTACGAC
ATGTGGGCGTTCAGATGGTGTTAAAACAAAAAATAAGGGTGGAGTAAAAT
ACAAGGCAGAACCGACGCCGAGAAAAAGCGGCAAGTGCCAAGCAGAAGAA
GCGTCAAATCGGACAGCCGAATATCATCGGAGGCGGGAGGTTAATTTACG
CCTTCTTAACCGAATAACATCTGATGGCGTCCCCGAGGATTGGGATGGAA
CTTTCCCAAGTGGACCAACGGAAGATTATAAACATTTAGTCGAGACAGGA
CATAAAGTTCAAAAAGAAAGCGTTTTATTCCCAAAATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061469-exon-scaffold_358-1575043694:796122..796879 | TCONS_00061469-exon-scaffold_358-1575043694:796122..796879 | Clytia hemisphaerica | exon |
| TCONS_00061469-exon-scaffold_358-1575043694:792694..794179 | TCONS_00061469-exon-scaffold_358-1575043694:792694..794179 | Clytia hemisphaerica | exon |
| TCONS_00061469-exon-scaffold_358-1510915933:796122..796879 | TCONS_00061469-exon-scaffold_358-1510915933:796122..796879 | Clytia hemisphaerica | exon |
| TCONS_00061469-exon-scaffold_358-1510915933:792694..794179 | TCONS_00061469-exon-scaffold_358-1510915933:792694..794179 | Clytia hemisphaerica | exon |
| TCONS_00061469-exon-scaffold_358-1491911889:796122..796879 | TCONS_00061469-exon-scaffold_358-1491911889:796122..796879 | Clytia hemisphaerica | exon |
| TCONS_00061469-exon-scaffold_358-1491911889:792694..794179 | TCONS_00061469-exon-scaffold_358-1491911889:792694..794179 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_358 | supercontig | scaffold_358:792694..796879 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008083 | growth factor activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008083 |
growth factor activity |
Blast
The following BLAST results are available for this feature:
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