TCONS_00061439 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061439
Unique NameTCONS_00061439
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2662

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061439 ID=TCONS_00061439|Name=TCONS_00061439|organism=Clytia hemisphaerica|type=transcript|length=2662bp
ATAGCTTGCTCCTGtccaaaatggaaaaaatgttcagaaaAGAGACAACT
CTCAGCCAACTGGTCAAGAGAACGCTGGATCAACAACAGGGCAATGGGAT
AAAGAGGTTAACAGTTTAGCATCGGAACTTCGAGATTGTAAAAAGACAac
atcaaagattttgaaagaaagGTTAGAAGTTTGTCAAACCAAGTTAAACA
AAACAGTTCACCAGATGAAAGAATTCCAAGAACGACTTTCGAATTCGGAT
CAATACACTACTATGGAAAGTCTGCCATATTTCAAACAGTTTGTGAGAGA
ATTTAAAGAGAAAATGAAGCCTCTAGAAGGCGAAGAAAACAAGTACGGTA
TCGAGTTAATGATGTTTCGATCAGATTACGAACAACTAGAACATTTACTG
CAAGACGATCAACGACCACCTGATAACAAACAACTGCTGGATCTCATTGT
CCAAGCGTTCAAGcCTCTGTCCCGTTCCTCATACGTCTGTATCAAACCAT
ACATGAACGCGCGAACAGCGGCTATTGTTGTTATCACACTTCTCATACTT
TACATTATCCATCACGTGGTCTCCATACCGCAAAGCATGATGGGGCGTTT
GACGTTCCTGTTTTTCGTTGTTTTCGTAATCAGTGTTTGTTGGGAATATT
ACAGGATGTATAAAATGGCCCTTGCCAAGAAGACTGCTAGTACAATGCAG
CTCCCTAAACCCCCTGAACAATGTCTACCTGTGGAAAAGATATCTGAATT
GGACGCTCTGCTGATTTGGTTTAAGGACCGGTTCACACTGGCAGACGACG
AATGTGTCAAATATCATGAGAATTTATTGGTGGATCCTTTTTGGGAAGTC
AGTCCAATGATGGCTATATCAGTTTGTCTGGCTCGATTCTTTTTGGAACC
TTTGAAATTATGTGCATCAGCATTTGGAGAAAGTTTTCGTCTCTTGTTCA
AAGAGATTCCAATACAATGGCAACCATTTGTCTTCATAACGTTGGTATTG
CTGACATCTCTTGTCATTCTCACACATGCAGGTTTGGAGATCTGGACGCC
ACTTATACGACTTGGTTTTCGTCCACGTAAAAATGACAATACTCTTGctc
ttgaaaatgaaaacagaCAACTTCGGCATGATAATGATAGGTTACGATTA
GAACTTGATAGACGCCCTGCTCTTCCACCACCACCTGCTCCAGCCGCCCA
GGGCGTTCAAGGTGTAGAAGAAGTCGGTGTCATTCCAAACCTGGTTCTTC
CAGCACAGAATTTCATTAGACCTGTCATAAATCAAAGCGGAGAAGGTGTA
AACGCCCCTGTCTTAGCTCTTGATAACGCCCTAAATTTATCACGTGACCA
AAACGCCCAACCCGGGCAGAACATTGTTATAGCACAACCTGTGGAAGAAT
TTGGTGGACGAAATAGAGCAAATAATTCACCGTCATCTCCTATTCAAGAA
GAACCAGGGAATGAGACCTTACCTGATGTTATGCTTCTTTCCGGATCGAG
TGGCGTGGTAGATgtcgaaaattttcattctttacCATCATCGACAGAGG
AGATGATGTCAGCCAATGCGACAAGCTTACCTGAAGAAGTTGATCCGTCT
GCGTCAAATAACGCGGTTGTCGGAGATGGTAGAGGCATTAATGCCCCGAA
TCAGACTATTAGTTCACAATCGGAAAGTCGAAACGAGCAGTTTGAAATGG
TTGATAATGCCAACGTTGAGAATTTTGAAGAAGAACTACTCGGTGCGAAC
GCGACGAGTGTTGTTAATGATAGAGCTCTGAATGCAGGTCAGATTGAAGG
ACAATCGGAGGAAGTGCACCAACAACAGCGTTTACCTGTTGAAAATTCTG
ATCATGTTGTGAgttaaagctttttagatatGATTTTTAAGGAGGAATAT
ATTATTATGTTAGATGTGATTTTGGTTAATAAcaaatttttctgtaaaga
ttTAAATGTAATTTCCAAAAGGAGATCAAAACTAAACTAGATAACCTCTG
TTTTTTGTAGACTTCGATCAACCTCATCcctgtgtatcccaggctttatt
tacgttactgatataGACGACAGAaaatattatctagcgctatcagtaag
cataaaaaactGATAATGCACAGGGATGGAACGAGGTTGGACTTTGATCA
ATTTAGGAGTAAGAgctgatttttttcttaattatCTATATCATAGAATT
GTATTAGACTGTGTTAAGTATACGTCATATCTTTCTTCGTTTTTAGTGTA
AAACTCCTATATAAGAAAGGAGACCTGAAAGCCTGGAGCTTTTTTATGGA
GTAATATTCGGATAGCATAATACCTCCGTTTTGTTGTATTTAGAAGTAAG
CGATGTCACTTGACAATAATCTCCGACCCGATTATTATGgtttaaaatgc
aattttttgaaagGTAACTACAGAGTTAAGGTTATTGAAAATTGTTACAT
GTATAGAAAAAGTTAGTTTCCGCAATTTTAGGCGGGAAGGAAGGCGTTGT
CGAAAGACAACCTCTCTTTTATAGTGAGAATTCAAGTATCAATATTGTGT
TCATTGTTCGATTAGATACTTTTCTTTATTACATGAATTTTTTGATAGAA
GAATGTAAATAACTTTGGTTTAGAAGGGAAAGaacaacaaaagaatttat
ttttattcaaaa
Run BLAST on NCBI

transcript from alignment at scaffold_358:407669..423687-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061439 ID=TCONS_00061439|Name=TCONS_00061439|organism=Clytia hemisphaerica|type=transcript|length=16019bp|location=Sequence derived from alignment at scaffold_358:407669..423687- (Clytia hemisphaerica)
ATAGCTTGCTCCTGTCCAAAATGGAAAAAATGTTCAGAAAAGAGACAACT
CTCAGCCAACTGGTCAAGAGGTTAGTATTATACTACCTATTATACACCTT
CCCAATAGAAATACAGTTGACGCTCTCTAATTCGACATTCTACTGTTCGA
TAGGCTCCCTTACTCGATGAAATTTAAGATCCCCGTCAACAAAAAACTCT
CATAAACGACGCTCCCTATTCGATAAGCTCCCTTATTCGATGAAAATCCA
ATTCCCCTTGAAGATCGAATGAGAGAGCGTGAACTGTACAATAAACTCTA
TCATTCGAATATTTCTACAATTCGAACTTGCTTCCAGTCACCGTCAAGGA
GAAACCGTCTTGAAATACAACCGTTACGTCAGATTTGCCCAATGGAATTG
CTTCATGTCCTTCATTTTTCAACCGACCAATGAGGTTACAAAAACGCTAA
AGTTTTTCCTCGTGTCGCGCGAAAGTGGAGACCGGTCTTTAGCCAGAGTC
AACTGTATAGTGGATATTGATAATAGTAAAAGTAAGGAAATAATGTTGCT
AGATGACCTCATAATATGAATTAAAGCGCAAAAAATTAGTAGTAAACGGT
CATCTTGAACAAGACAAAAACTTTTTTGGACCTACCTCGGAGGTTGTCCG
TTACCAGCTTTTCTTGGGATTGGCTCATTAGTTTTTTTCATTTTTTGCTC
AGTGATGAAATTTAATGCGTTGTGCATTTTCGCTAAATGCTATATTTACT
GACTGATTGTTTTCACTCCTTATTGCTATCTAACTTTCATCATTCCCTAT
TTAGAACGCTGGATCAACAACAGGGCAATGGGATAAAGAGGTTAACAGTT
TAGCATCGGAACTTCGAGATTGTAAAAAGACAACATCAAAGATTTTGAAA
GAAAGGTTAATCGATGAATTGTTCTAAATTCTTTTGTTTTCACTTGTTTT
TTATAATTTTAGTTTTGCATCTAAACTTCGAAAAAGAAGGGTTGTCGATA
GACGATCCTATCGTCTACACAAGATCACTACTAAAAAGGGAATAGTTTAG
GAGAGGCGTGATAAATTCGGGTGGAGTAAGCAGTGGCGGAGATGTTTACA
GTGTAGACGATACCAATTTGGCGCAAAAGAAAAAAAACTGAAAAAAGCCG
TGGATTTGCCTTTGCGTATTATTGACGATTCGTTCGACCATTTTCAAAAC
ATTCGAAAGCGTAACGTACAGTGTATCAACTCTTATTTTTCTACACTGGC
TGAAGGAATTTCTTGCATGAAATTCTTTTCTTTATGGGTTTATCTTGTAG
CTCAAATTTAGAATGTTAGTTTGCAATTTATTTGCAACAAGTATTTAAAT
TTTAAGAGCCATGCTTCATATGTTTAACATACTTTGACTTCAGAAATAAT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAATTGAA
GACAATTTGTTTACAATATTTTCCACCATATTCTATATTTAAAGATAATT
ATATTCTGGCCTTAGGTGGAAGTTGTAGACGTTCATGGGGCGTTCATGGT
ACAGCAAGATGCTGTTATTGCTACCATACAATGCTACTTGAAAGTCTTAT
CCAAATCCTAGCTGGAAAAAACGATTATTTAAAAGAAGATAAAATATTTT
ATTTTCTCAGACATATCGTACTACATATTCTACAAATGGCCTTTTAATCG
GCTGATTGGAGTGAAAACTGAGCTTTTTCAGGGTTTCGAGAAATTAAACC
ANTTTTGGTGAACTCTTGATATGCACCATTGTCTATTCCACAGCTGATTG
GTTGAAAGTGACGTATTGACTTATTTTACGTCACTTACAACGAATCACAT
ACTGGGTACGTGATGTAATGTCAGAAGACCTTGGAATGGCACATATCATG
AATTTGCAGTGAAAAGGTGCAATTCATGAAAATTTTAACCTTTCACACTG
TGAATTTGCCAAAAATTTATGGTGACTTTTAAACATTTGGTTTTTCATGT
ACTCGTACATCTGGAATTAACTGAATATAAACTATGTTCTGGTTCAATTA
ATTGCCCCTACCTAACCTAAGAACACCCTGTTTACTTTTCGAGAAAAATC
TCAAAAAAGCCAGTTATATATGTCCAGTGAAGTGGCAATCTGAACACCCA
ATAAATAAGAAGAATTAGAATTTGTAACACCAGTTCTAGAAGGTTCTATT
CCTAGAAACTTGGGGAAATAGATTAGAAACAAACATGAAAAAATAGTACA
TGAAGGAAAGTATTTTCAATCAAAAATCAAAAAGTAGTTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTTTCAAGGAATGGAAAGAATGGAAAACATACCTTGCC
TGATTAAAATGGAATCTTGAGGGGAAAGTCAGTCAGGTTGTTGTTCATAT
TCAAAAAGATTTTTCAAAAAGCAAATCTTGAGGAATCTAAAGTCTATTCA
CGATAAGTGTGCACTCTTTTTTCATTTACCTATAACTTTTGAAGGAATTC
TTCAATCTTTATAAATTTGGTATCATTGGAAAGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGATCTTGTAGAAAGGT
GCTATAACTATCATTTTCACTGAAGTAAATTCTTAATCATCGAACGTCAT
CACTGTGAAAAAAATTCTCAAAAATAATCATTCAGTCAAANCTACTGACA
CACTAAAGACTTATATACTGTACACAAAAATTCATACATAAAAAAGACTA
ATAAAAGTAGAAATAATTGTTCGCCACCATGAAAATAAATCTCATAAAAA
CAATCTGAGTGAAATTTCATCAGCCATCTTTCTCAAACGTTTAGCTGTTT
GCACTGTTTGCACTCAGTTCGAACAAAANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTCTCCCGCCGATTTTTTTCCGTATACCGCCATAACGCCATACCG
CCATTTTTCCCGCCTTTCTTATCACTGTAACGGACGATAACATCGTCTAG
GTTGTCGATAAATTTGTTCCCAATTTTTTATGTTGGTACAATTCCATTAT
GGAGAAAAGGTTGACTCGGTTAGATTCGCGAATCCTTAGAATCTCTTGAA
TTTCAAAGACTTATCCTTGTGCTATCAAGAAAAACCTAATATTAACCCAT
TCCGTGCCAATTTCGAATACATCCAAGTTGACGGAGAAAGTGTTTTGGAA
CCATCAACATTTTTTACGAAGTTAACAGAAATATATTGAATACTTCGTGG
CTACAAAAAAAATCTAACTTCTTCATTTAATCAATATGATAAACTTCCCG
GTTTAACATGAAGGCTACGCCTCGATTTAATTGTCCTTTTATTAACATAT
TAATTAACGTATTATCCTCTTGAGAGTTGTACAAATGCACAGTATAATTT
TCTGTGTAAGACCAGAGGAATGTTAAAAGATGGAAAACAGCTTTTCTGAT
TACCCAAAGTTAACAACACGCTAATTTTGCGTATATTTTTTACAGCGACA
CAACAAAAGAAACCTATTAACTCGACAGACCTGGTATATGGTGAGCCGTT
TTTCCATTGTTTTCAAGAAACTGTTTTTCCGTATCTTTACATTCCTCTGA
ACCTTTTTAGAGTTTTTCGAGATGCGCTAATGTAGTTATCATCGACAATT
TAACGGTCTGTCAGTACTGTATTTTTATTATCTTTCTGACCAATTGACTG
GATGAAAAAAAAATGTATCATTTTTAATTTAACATATTGGGTGAAGTTCG
TTTTAGGGCGTGACAGTCTTGTCAACCGCCTTTGCCCCCAATAATTTACC
ATTGATCGGAGTATTACAGCTGGAACGATTGATTTATATATCAAATTTCA
GTTATATTTAACTTTACTGAACTTATACTGAACATTGACTTTGATTATGG
ATTCTTTAACTGGTAAAAGAAAATTGATGGTTGGTCTAGTATGCTCTGTT
GGTTATGGCTTTCTATATATGGTCAGTAACGCGATTTATCAATACGTTTA
CAAAAACAGCCAAGTGGGCCAATCAGAAGCTATGTTGTTGCGTTTTATCA
CTGGGCTTGTGGCAGTAGGGTCCAATTTGTTAACAGATGGCAAACGTCCT
ATTCCTAAGAACAAAACTGATATTTGTTTTCTCCTGATAGCTGCCGTGTT
TCGAATCGGAGGAGCGTTGCTTACTAATTTGTCTTTGAGGTACGTCGATT
TGGGAACGATAGCCGTCATTGCTGCCACGTCACCTGCCCTCTCCATTATC
ATGTCTTGGATATTTTTAAAAGAGAAGACCCGACTATCTGATATCTTACT
TGGTCTGGCTTCATACGTCGGAGTTGTGTTAATCGTGTGGAATCGATTGT
CTGCGGTTAAACCGAATCCGTATCTGTATGTCATTGGCGTAGTGTTCAGT
TTTATGAGCATTTTTGCTTACTCGTTTTGTAATGTTTTGACGAGAAAAAT
GGTCGGGAAAACCGATTTCCGACAATCGTTGTTCGTTATCAATTTCGTTG
GTGTTATTATTTTCGCATTTTCGCCGCTCGTTTTCGATGCTGATTTCGTT
CTTACAAGATCGCCGTTGGAGTATTGTTATCTGGTACTTGCTGGGGCAAT
GGTATGCTTAATAGCGCTGCTAATGGAAGTTTTGAGCTTGAAATGCTTGA
ACGTTGGTATCGTTTTATTGTTCCGGAACACTGAATTTTTATGGGCCTAT
TTACACGATGTTATTTTTGATAACCTTTATCCAACACCTGCTATTATTTT
AGGGTTACTCATTGTCATGTTGTCCATATCACTTATTGCTGTGAACTTGA
TGAAAGACATACCCTACTCGCAAATTGCGAGAAAAGGGTGGAGAAAAGTT
ACCATGTGTGTTCGCTGATTGCTACATAAATTTAATTTTTGAAAAATATT
TTTAGAATAAAGACGAAAAGTTTTTTTCGCGTTGGTGCAATGAATGCAGC
ATTCGACATAATGGCTGTGTCATTCCGGTGTAGTCTACTCTTAGGGGCCT
TATAAATGGTACCCCCCCCCCTTATATGATTTTAGGGTTATGGAGCCCCT
ATAAAATTTGACTTTTGTTGTAGAATTAATTGCTAAAATTATTGAATACC
TGAAGAATTTTTTTACCTTTTTACCCTTTTTTCACAGTTTTTTTTCTTGA
AGATTGAGCCGGTTTGAGAACTCGATTCATTATTCCAAAAACCCTGGAAA
TATGCCTGAAAGTTAGAATTCAAAAAATGTTTTAATAGCCTGAAGCAATT
CAAAATGAGAAAAAACATTCTTCGATGCTTTTGTTCATCTCAAAACACTC
GGCCTTTGATTTGAAAGATTCGTATTAAAATAATCTTTAACAGAATTTCT
AATTTTTGTACATAAAAAACAAATTATTCAACAATTTTGTAGAATTTTTA
GCTTAAAGCTAGATTACTTTTTAGTCAATTTTCTAATTAAATTCATTGTT
TAAAATCAAAACTGGTTCAAAACCTGGTATTTTTCGGGTGTTTCCGTATA
AAAGATTACGTCATGGATATCAAGAATAAACCTTTTTTTTAACGAAAAGT
GAAACTTCTGTATGTAGTTTTTTCTCCTCTCCCTTCTTTGAATATCCATG
ACGGAAATTTAGAATGGCCTTGGGAGGAAGTAATTAATAGTAAGTCTGCG
ACCGCAGTCGGAGGTGACCCGAAGGTAGGGGAGGGTGTCACTGTTTTTCC
CTGGATTGCCACAATTACCCTTGATCCTTCTCTTGATTGCTGAGTATCAA
GCAGAGAGGCATCAATTACCATTTTGGGAATCTTTGGTATGACACGGCTG
GGGGCTGAACCCACAACCTTGTGCACTACACTACGTTCGCTAATAAGTAA
GTTTGAGAAAAGAAAAGCTCTCCATAAAGATTGATCAGTTTTCCTGGAAA
TAATACTCGAATGGGTAGCCTACCCCGCGAAAAAGAGACAAGAAAGCAAA
AGAGAAAACTTATTATTTATATAAAAAGATTACAGTTGTTTATACACCTG
GCGTTTGTGTGAAAACCACACGGGTCGTGAGTTTAGATGGGCAATAAATG
GCTTCATTTCCAATCTAAGAGTGTCAAATCAAGCTTTTTCGGACTCAACT
TAAGAAATTCTTTTTTTCCCATACAGGACTGCATGTCTTCCTATTTTATC
TGTATTTGTCTTCAGGTTAGAAGTTTGTCAAACCAAGTTAAACAAAACAG
TTCACCAGATGAAAGAATTCCAAGAACGACTTTCGAATTCGGATCAATAC
ACTACTATGGAAAGTCTGCCATATTTCAAACAGTTTGTGAGAGAATTTAA
AGAGAAAATGAAGCCTCTAGAAGGCGAAGAAAACAAGGTATTAACCATTT
AATTTAAAGCCGCGTGATCAACCTTTCTCAAGCAAAAAAAGTGAAGCTTT
AAAATTTGCGCCGCTTTTGGGATAACGGATAGGATCTCGCATCTTCTTTG
TTTTCACACGGCACACGTTTTTTTTTCGAAAACCGGCTATAAATTTTATT
TTCAATATGGCGTTTGTTTAAAAACCACGCGGGCAATACGTTTTAAATGA
GAATTAAGTGGCTTTGTTTTGTATTGAAGAGTTGCCTTTCTATGAACATA
ACAGCCCAGTAGAATTAGGTTTCCACCTTGAAAAATTCCTCATAAAAAAT
ACCTCTTATTAGCGAACATTAATTCGTTCCCTCCAATTGTTTTGGCTATT
TAGAAGATCTATTTAGGTCCTAGAGCCAACAGAAAAAAAAGCCGAAGTCG
TTTCGGAAAGTTTTGGACCTTTTTTGAGGAATTTATGTTGACGTCAAGTT
TTAGCACAAACCTCCCTGCACAAACCCTAGTCTGAAATGTGGCTTTGTAT
ATTTGTTGTTTTCGGCAAGGCATTCTTTTTAAATAAATCAAAATTCGGAC
AAGAATNCTGGTGTTATTATTTTCGCATTTTCGCCGCTCGTTTTCGATGC
TGATTTCGTTCTTACAAGATCGCCGTTGGAGTATTGTTATCTGGTACTTG
CTGGGGCAATGGTATGCTTAATAGCGCTGCTAATGGAAGTTTTGAGCTTG
AAATGCTTGAACGTTGGTATCGTTTTATTGTTCCGGAACACTGAATTTTT
ATGGGCCTATTTACACGATGTTATTTTTGATAACCTTTATCCAACACCTG
CTATTATTTTAGGGTTACTCATTGTCATGTTGTCCATATCACTTATTGCT
GTGAACTTGATGAAAGACATACCCTACTCGCAAATTGCGAGAAAAGGGTG
GAGAAAAGTTACCATGTGTGTTCGCTGATTGCTACATAAATTTAATTTTT
GAAAAATATTTTTAGAATAAAGACGAAAAGTTTTTTTCGCGTTGGTGCAA
TGAATGCAGCATTCGACATAATGGCTGTGTCATTCCGGTGTAGTCTACTC
TTAGGGGCCTTATAAATGGTACCCCCCCCCCTTATATGATTTTAGGGTTA
TGGAGCCCCTATAAAATTTGACTTTTGTTGTAGAATTAATTGCTAAAATT
ATTGAATACCTGAAGAATTTTTTTACCTTTTTACCCTTTTTTCACAGTTT
TTTTTCTTGAAGATTGAGCCGGTTTGAGAACTCGATTCATTATTCCAAAA
ACCCTGGAAATATGCCTGAAAGTTAGAATTCAAAAAATGTTTTAATAGCC
TGAAGCAATTCAAAATGAGAAAAAACATTCTTCGATGCTTTTGTTCATCT
CAAAACACTCGGCCTTTGATTTGAAAGATTCGTATTAAAATAATCTTTAA
CAGAATTTCTAATTTTTGTACATAAAAAACAAATTATTCAACAATTTTGT
AGAATTTTTAGCTTAAAGCTAGATTACTTTTTAGTCAATTTTCTAATTAA
ATTCATTGTTTAAAATCAAAACTGGTTCAAAACCTGGTATTTTTCGGGTG
TTTCCGTATAAAAGATTACGTCATGGATATCAAGAATAAACCTTTTTTTT
AACGAAAAGTGAAACTTCTGTATGTAGTTTTTTCTCCTCTCCCTTCTTTG
AATATCCATGACGGAAATTTAGAATGGCCTTGGGAGGAAGTAATTAATAG
TAAGTCTGCGACCGCAGTCGGAGGTGACCCGAAGGTAGGGGAGGGTGTCA
CTGTTTTTCCCTGGATTGCCACAATTACCCTTGATCCTTCTCTTGATTGC
TGAGTATCAAGCAGAGAGGCATCAATTACCATTTTGGGAATCTTTGGTAT
GACCCGGCTGGGGGCTGAACCCACAACCTTGTGCACCGTACTACACTACG
TTCGCTAATAAGTAAGTTTGAGAAAAGAAAAGCTCTCCATAAAGATTGAT
CAGTTTTCCTGGAAATAATACTCGAATGGGTAGCCTACCCCGCGGAAAAG
AGACAAGAAAGCAAAAGAGAAAACTTATTATTTATATAAAAAGATTACAG
TTGTTTATACACCTGGCGTTTGTGTGAAAACCACACGGGTCGTGAGTTTA
GATGGGCAATAAATGGCTTCATTTCCAATCTAAGAGTGTCAAATCAAGCT
TTTTCGGACTCAACTTAAGAAATTCTTTTTTTCCCATACAGGACTGCATG
TCTTCCTATTTTATCTGTATTTGTCTTCAGGTTAGAAGTTTGTCAAACCA
AGTTAAACAAAACAGTTCACCAGATGAAAGAATTCCAAGAACGACTTTCG
AATTCGGATCAATACACTACTATGGAAAGTCTGCCATATTTCAAACAGTT
TGTGAGAGAATTTAAAGAGAAAATGAAGCCTCTAGAAGGCGAAGAAAACA
AGGTATTAACCATTTAATTTAAAGCCGCGTGATCAACCTTTCTCAAGCAA
AAAAAGTGAAGCTTTAAAATTTGCGCCGCTTTTGGGATAACGGATAGGAT
CTCGCATCTTCTTTGTTTTCACACGGCACACGTTTTTTTTTCGAAAACCG
GCTATAAATTTTATTTTCAATATGGCGTTTGTTTAAAAACCACGCGGGCA
ATACGTTTTAAATGAGAATTAAGTGGCTTTGTTTTGTATTGAAGAGTTGC
CTCTCTATGAACATAACAGCCCAGCAGAATTAGGTTTCCACCTTGAAAAA
TTCCTCATAAAAAATACCTCTTATTAGCGAACATTAATCCGTTTCCTCAA
TTGTTTTGGCTAATTAGAAATCTATTTAGGTCCTAGAGCCAACAGAGAAA
AACCCGAAGTCGTTTCGGAAGGTTTTGGGCCTTTTTTGAGGGATTTGTGT
TGACGTCAAATTTTAGCACAAACCCCCCCTGCAAAAATCCTAGTTTGAAA
TGTGGCTTTGTATATTTGTTGTTTTCGGCAAGGCATTCTTTATAAATAAA
TCAAAGATCGGACAAGAATGGCGATTTCAGCGTTCACATTTTATTTCATT
TAGATATTTCCATATGGGAGGTTCCTCATTGGAACACTTTTGATAATTAT
TTACAGAAAACAAAGAAAACGCTAGATTCAACCCATCGTCCGAATCGGGC
GCTAATTTCAATACATTACGGTTTTTATAAGAAGATCCAATACCAATATT
TTTGAAGCCTTCGGACGTTCTTAACTTATTGAGTTTAAAGCCTAATAATG
TTCTTAACATATTCTTTTTTTTCCCTATTTGCGGGTATTTTTGTCAATTT
TCTCAAGAATTTCGATGATTTCGAGTTTCGCAAATACTTAAAATGTTCTT
AACATGTTCTTAATTCTTTGGCCATCGAAGCCTTAATGTTCTTTATATAA
TTTCTTCTTATAAAAAAACGTGGTAATAGCATCTTCTCTTGCTTGTTCTT
TAGTACGGTATCGAGTTAATGATGTTTCGATCAGATTACGAACAACTAGA
ACATTTACTGCAAGACGATCAACGACCACCTGATAACAAACAACTGCTGG
ATCTCATTGTCCAAGCGTTCAAGGTGAATAATTGAAGTATTGATATCATT
TTGTCTATTAACCTCATACAAAGAAGTGTGTGAGACCAAATTTTCTATTT
TAGTTTTGGGTTTGAACCCGTAAGTCTAAAAACTGTACGTTTTCTTTTAA
CCCTATCTGATCCTTAGGTGTCAGGGTTTTGTGTTATTCCTTGAGGAGAG
GGGTACATTGAAATCCACTCTAACGATTCCTGATTAGATAGTCCAATCTC
CATGAAACTTTCTTGCGTAACTAATATTCGGGGTCGAAAAAAAATCGGAA
AACTTGTATTTCGTGGGTTTTAATTTTCGCGGTTTTGCCCTTTTTTGCAC
AAATTTCTTTCATTTTCCTAGAGATTTTGCAAATCTTTCGATAAAATGGG
GAAAAATGGTAAACTGGCACAATTTGTTATGGAGTACTTAGTCTAGCAAG
CTAGACGACTAATTCAGACATACCAGAAATAAAGGATTTTACAAACTAAA
TCATGTAACAATAATCGTATTATCATTTAACGCCTTTACTACTTTATTAC
ACGCATTATAAAGGACTCCTGTCTATGGAGTACTCTTCTCTGTTCAATTT
TATAATTATTTTTTTCTCATTTAGCCTCTGTCCCGTTCCTCATACGTCTG
TATCAAACCATACATGAACGCGCGAACAGCGGCTATTGTTGTTATCACAC
TTCTCATACTTTACATTATCCATCACGTGGTCTCCATACCGCAAAGCATG
ATGGGGCGTTTGACGTTCCTGTTTTTCGTTGTTTTCGTAATCAGTGTTTG
TTGGGAATATTACAGGTAGGGTAAACTTTCTAAGCTCGTGGAATTGCTTT
TATAAACATTCTGCTTGGACTACGAGTCCTAATTTTTTTTCAATAGAGCT
AATTATTTTATGTTTTTTAAAGAGTAGAATGTATATCCATATATCTCAAC
TAGAAGCTAGCAGCGATGGCTAAGTGGTCTATGGTATAAGCGCATCATTC
AGTCTATCTCCCAGTTGGAACCTCCGCTCTTTCCAATGTTGACTTTGTTC
CTCGGACCGGCTGCCAGCACCCATATAATATCTCATATTATAAGATTTTA
AAGGTTTTAAATAAGACGAACATGCCTCGAAAAAAACTTGCCTAGCAAAA
AATTTCAAGCGGAACTATTCTCTAAGTCTGATTAATATTTCTTACTATTT
CAGAAATGTGCGCATTAAACTAAATAGATCTCAAATCTCTCGAACAGGGA
CAAAATATGTTTAAATGATAATTTCTTTTAACAGGATGTATAAAATGGCC
CTTGCCAAGAAGACTGCTAGTACAATGCAGCTCCCTAAACCCCCTGAACA
ATGTCTACCTGTGGAAAAGATATCTGAATTGGACGCTCTGCTGATTTGGT
TTAAGGACCGGTTCACACTGGCAGACGACGAATGTGTCAAATATCATGAG
AATTTATTGGTGGATCCTTTTTGGGAAGTCAGTCCAATGATGGTAAGTAA
TGGATCTTTTGAACCAGCTGGCAAACAACGTTGTTTCAACGCTTATCTAA
TGTTCACAACGTCCATATAACGTTAGATGAACGTTGAAACGACGTTTTGC
GCCAGCTTGGTAAGGACTTTGCGCGATTGTTGACTTTAATGTCAAATTTA
ACCAACGCCGAAAACAATAAGAATCTGCAATTGTAGAATACCATAAGAGT
TTTCATTTTGGAGTGTTCTTAATTTGACGTTTGACCGAAAGACTTTTTTT
CACAGGGCTAATTTGGTGGATTAGAAGATTTATACCCCTTGCAAAGTTCA
TAAATTTGTTCATAAATTTTTGGAACCCAAAATTTTTTTAATTTTATAAG
CATACAAAAATTTGAAAACAGGCTCGGAGATGCTTAGGTCGAGGGCTTCA
GAAGGCTGAAAATGCTTACAAGGAGGGCTATACAAAATTTTAAGGAAATT
CCGAAAATCCGCAAAATCCCAGCCAAAAACAGGCAATTTAGGAAAATACA
TTTTCGTAGGCTCAAGGTGATGTTTAGCGTATGTTCAATTTTTTTTCATA
CTGTATCAGACCTATGATATGCTTATAAAAAATCATGTAATTCGGTGAGT
TTTGCCAAAAACCTCCAAATCTAATCTTGCAATGAGAGTGAAGTTAGATT
ACTTTTCTTATCAGGGACATTTTTGCGATCAATTTTTCAAATAGGGAGTA
GGTCCTACCGGGTCAGTGATATTGGTGACTTTGGTCTAGTGGGTAAGACT
CGAATACAGTCCAAACACAGGCAATGAGAATGGTTATGGGCAGTCTTTAT
GCAGTAGAATAAAGAAAAAACTCTTGCTAAAGTTTTAACAAAGTAAACCA
AGTTTTCTGACCTTTGGATTTCAAATTTTCTCATTCTTTCATTCTTCAGG
CTATATCAGTTTGTCTGGCTCGATTCTTTTTGGAACCTTTGAAATTATGT
GCATCAGCATTTGGAGAAAGTTTTCGTCTCTTGTTCAAAGAGATTCCAAT
ACAATGGCAACCATTTGTCTTCATAACGTTGGTATTGCTGACATCTCTTG
TCATTCTCACACATGCAGGTTTGGAGATCTGGACGCCACTTATACGACTT
GGTTTTCGTCCACGTAAAAATGACAATACTCTTGCTCTTGAAAATGAAAA
CAGACAACTTCGGCATGATAATGATAGGTTACGATTAGAACTTGATAGAC
GCCCTGCTCTTCCACCACCACCTGCTCCAGCCGCCCAGGGCGTTCAAGGT
GTAGAAGAAGTCGGTGTCATTCCAAACCTGGTTCTTCCAGCACAGAATTT
CATTAGACCTGTCATAAATCAAAGCGGAGAAGGTGTAAACGCCCCTGTCT
TAGCTCTTGATAACGCCCTAAATTTATCACGTGACCAAAACGCCCAACCC
GGGCAGAACATTGTTATAGCACAACCTGTGGAAGAATTTGGTGGACGAAA
TAGAGCAAATAATTCACCGTCATCTCCTATTCAAGAAGAACCAGGGAATG
AGACCTTACCTGATGTTATGCTTCTTTCCGGATCGAGTGGCGTGGTAGAT
GTCGAAAATTTTCATTCTTTACCATCATCGACAGAGGAGATGATGTCAGC
CAATGCGACAAGCTTACCTGAAGAAGTTGATCCGTCTGCGTCAAATAACG
CGGTTGTCGGAGATGGTAGAGGCATTAATGCCCCGAATCAGACTATTAGT
TCACAATCGGAAAGTCGAAACGAGCAGTTTGAAATGGTTGATAATGCCAA
CGTTGAGAATTTTGAAGAAGAACTACTCGGTGCGAACGCGACGAGTGTTG
TTAATGATAGAGCTCTGAATGCAGGTCAGATTGAAGGTCGATCAGAGGAA
GTGCATCAACAACAGCGTTTACCTGTTGAAANTTATTATGCTTCATTCCG
GATCGAGCGACGTGCTGGTTGATGTCGACCATCAATCTTTACCGTCATCC
ACAGAGGAGATAACGTCAGCCAATGCAACAAGCTTACCTGAAGTTATTAA
TCTGTCTGCGTCAAACAACGCGGTTGTCGGAGATGGTAGAGGAATTAATG
CCCCGAATCAGACTATTAGTTCACAATCGGAAAGTCGAGACGAGCAGTTT
GAAATTGTTGATAATGCCAACGTAGAGAATTTTGAAGAAGAACTACTTGA
TGCGAACGCGACGAGTGTTGTTAATGATAGAGTTCTGAATGCAGGTCAGA
TTGAAGGACAATCGGAGGAAGTGCACCAACAACAGCGTTTACCTGTTGAA
AATTCTGATCATGTTGTGAGTTAAAGCTTTTTAGATATGATTTTTAAGGA
GGAATATATTATTATGTTAGATGTGATTTTGGTTAATAACAAATTTTTCT
GTAAAGATTTAAATGTAATTTCCAAAAGGAGATCAAAACTAAACTAGATA
ACCTCTGTTTTTTGTAGACTTCGATCAACCTCATCCCTGTGTATCCCAGG
CTTTATTTACGTTACTGATATAGACGACAGAAAATATTATCTAGCGCTAT
CAGTAAGCATAAAAAACTGATAATGCACAGGGATGGAACGAGGTTGGACT
TTGATCAATTTAGGAGTAAGAGCTGATTTTTTTCTTAATTATCTATATCA
TAGAATTGTATTAGACTGTGTTAAGTATACGTCATATCTTTCTTCGTTTT
TAGTGTAAAACTCCTATATAAGAAAGGAGACCTGAAAGCCTGGAGCTTTT
TTATGGAGTAATATTCGGATAGCATAATACCTCCGTTTTGTTGTATTTAG
AAGTAAGCGATGTCACTTGACAATAATCTCCGACCCGATTATTATGGTTT
AAAATGCAATTTTTTGAAAGGTAACTACAGAGTTAAGGTTATTGAAAATT
GTTACATGTATAGAAAAAGTTAGTTTCCGCAATTTTAGGCGGGAAGGAAG
GCGTTGTCGAAAGACAACCTCTCTTTTATAGTGAGAATTCAAGTATCAAT
ATTGTGTTCATTGTTCGATTAGATACTTTTCTTTATTACATGAATTTTTT
GATAGAAGAATGTAAATAACTTTGGTTTAGAAGGGAAAGAACAACAAAAG
AATTTATTTTTATTCAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038543XLOC_038543Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061439-exon-scaffold_358-1575043694:423618..423687TCONS_00061439-exon-scaffold_358-1575043694:423618..423687Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1575043694:422783..422883TCONS_00061439-exon-scaffold_358-1575043694:422783..422883Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1575043694:413336..413507TCONS_00061439-exon-scaffold_358-1575043694:413336..413507Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1575043694:412215..412334TCONS_00061439-exon-scaffold_358-1575043694:412215..412334Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1575043694:411423..411613TCONS_00061439-exon-scaffold_358-1575043694:411423..411613Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1575043694:410746..410953TCONS_00061439-exon-scaffold_358-1575043694:410746..410953Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1575043694:408902..409838TCONS_00061439-exon-scaffold_358-1575043694:408902..409838Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1575043694:407669..408531TCONS_00061439-exon-scaffold_358-1575043694:407669..408531Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1510915933:423618..423687TCONS_00061439-exon-scaffold_358-1510915933:423618..423687Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1510915933:422783..422883TCONS_00061439-exon-scaffold_358-1510915933:422783..422883Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1510915933:413336..413507TCONS_00061439-exon-scaffold_358-1510915933:413336..413507Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1510915933:412215..412334TCONS_00061439-exon-scaffold_358-1510915933:412215..412334Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1510915933:411423..411613TCONS_00061439-exon-scaffold_358-1510915933:411423..411613Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1510915933:410746..410953TCONS_00061439-exon-scaffold_358-1510915933:410746..410953Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1510915933:408902..409838TCONS_00061439-exon-scaffold_358-1510915933:408902..409838Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1510915933:407669..408531TCONS_00061439-exon-scaffold_358-1510915933:407669..408531Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1491911889:423618..423687TCONS_00061439-exon-scaffold_358-1491911889:423618..423687Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1491911889:422783..422883TCONS_00061439-exon-scaffold_358-1491911889:422783..422883Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1491911889:413336..413507TCONS_00061439-exon-scaffold_358-1491911889:413336..413507Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1491911889:412215..412334TCONS_00061439-exon-scaffold_358-1491911889:412215..412334Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1491911889:411423..411613TCONS_00061439-exon-scaffold_358-1491911889:411423..411613Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1491911889:410746..410953TCONS_00061439-exon-scaffold_358-1491911889:410746..410953Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1491911889:408902..409838TCONS_00061439-exon-scaffold_358-1491911889:408902..409838Clytia hemisphaericaexon
TCONS_00061439-exon-scaffold_358-1491911889:407669..408531TCONS_00061439-exon-scaffold_358-1491911889:407669..408531Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:407669..423687 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.00996803	0	1.01785e-06	0.208151	0	0.312922	0	0	0	2.30857e-08	0	0	0	0	0	0	0.444628	0	0	0	7.02326e-09	0	0.144797	3.19852e-07	0.000697684	0
Blast
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BLAST of TCONS_00061439 vs. Swiss-Prot (Human)
Match: CLCC1 (Chloride channel CLIC-like protein 1 OS=Homo sapiens GN=CLCC1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.541e-16
Identity = 41/122 (33.61%), Postives = 64/122 (52.46%), Query Frame = 2 
Query:  596 RLTFLFFVVFVISVCWEYYRMYKMALAKKTASTMQLPKPPEQCLPVEKISELDALLIWFKDRFTLADDECVKYHENLLVDPFWEVSPMMAISVCLARFFLEPLKLCASAFGESFRLLFKEIP 961
            +L  +  + F+ S+ W +  +YK+A A+  A   ++   P   +  +K+    ++  WF+  +T  DD C KY+E LLV+P W V P  A++V    F  EPLK      GE  + L KEIP
Sbjct:  212 QLRRVLIISFLFSLGWNWMYLYKLAFAQHQAEVAKME--PLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKALAVTFTTFVTEPLKHIGKGTGEFIKALMKEIP 331
The following BLAST results are available for this feature:
BLAST of TCONS_00061439 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CLCC13.541e-1633.61Chloride channel CLIC-like protein 1 OS=Homo sapie... [more]
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