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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061427 ID=TCONS_00061427|Name=TCONS_00061427|organism=Clytia hemisphaerica|type=transcript|length=434bp
CTCattcaaaagagaaaaataataattgcaCGAAGCTGTCGAAAAAACAT
AAACTGATTCACTGGTAGACATTGACGATTCTTTCTTCTTGTAATCAGAG
CTAGCTGAGAAACTTGCACCCCATCCTCCACCGCTAACTTCAGCTGAGGC
GGACAACTCTCTAGAGAATTGTCGAGAATTTTTGACGGTTTGACTTGAGA
ATGAGGTAACACAAGAAACATCAGGGACTAAATCGTAGCCTTCAGGTACT
TGATATCGACAATCAGCTGTCCTCTTTGAATCACTATAATCAGCCTGGAA
AACAGGATGTGTCAATCCAGGATcaTGTCCAATTGCCAATGGATATCCAA
ACAAGATATTGTAGCCATAAAGAGCATAATCAAAATCCGGGAACGATCTT
TTCATCTGGTTAGAATTACATAGCTCGATTTCAC Run BLAST on NCBI transcript from alignment at scaffold_358:258234..259438- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061427 ID=TCONS_00061427|Name=TCONS_00061427|organism=Clytia hemisphaerica|type=transcript|length=1205bp|location=Sequence derived from alignment at scaffold_358:258234..259438- (Clytia hemisphaerica)
CTCATTCAAAAGAGAAAAATAATAATTGCACGAAGCTGTCGAAAAAACAT
AAACTGATTCACTGGTAGACATTGACGATTCTTTCTTCTTGTAATCAGAG
CTAGCTGAGAAACTTGCACCCCATCCTCCACCGCTAACTTCAGCTGAGGC
GGACAACTCTCTAGAGAATTGTCGAGAATTTTTGACGGTTTGACTTGAGA
ATGAGGTAACACAAGAAACATCAGGGACTAAATCGTAGCCTTCAGGTACT
TGATATCGACAATCAGCTGTCCTCTTTGAATCACTATAATCAGCCTGGAA
AACAGGATGTGTCAATCCAGGATCATTAGTAGGGGGAATTTTGTTCGATT
TTTTGGAATCGCTTGACTGTTTTGTTAGAAGCACTTGTTATACATTTTTG
GAAAGCTAAGGGGTAGGGGAATCGAAATTANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATAG
TAATTTCGATTCCCCTACCCCTTAGCTTTCCAAAAATGTATAACAAGTGC
TTCTAACAAAACAGTCGAGCGATTTTACAAAATGCCCTCTACTACATGTC
CAATTGCCAATGGATATCCAAACAAGATATTGTAGCCATAAAGAGCATAA
TCAAAATCCGGGAACGATCTTTTCATCTGGTTAGAATTACATAGCTCGAT
TTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061427-exon-scaffold_358-1575043694:259115..259438 | TCONS_00061427-exon-scaffold_358-1575043694:259115..259438 | Clytia hemisphaerica | exon |
| TCONS_00061427-exon-scaffold_358-1575043694:258234..258343 | TCONS_00061427-exon-scaffold_358-1575043694:258234..258343 | Clytia hemisphaerica | exon |
| TCONS_00061427-exon-scaffold_358-1510915933:259115..259438 | TCONS_00061427-exon-scaffold_358-1510915933:259115..259438 | Clytia hemisphaerica | exon |
| TCONS_00061427-exon-scaffold_358-1510915933:258234..258343 | TCONS_00061427-exon-scaffold_358-1510915933:258234..258343 | Clytia hemisphaerica | exon |
| TCONS_00061427-exon-scaffold_358-1491911889:259115..259438 | TCONS_00061427-exon-scaffold_358-1491911889:259115..259438 | Clytia hemisphaerica | exon |
| TCONS_00061427-exon-scaffold_358-1491911889:258234..258343 | TCONS_00061427-exon-scaffold_358-1491911889:258234..258343 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_358 | supercontig | scaffold_358:258234..259438 - |
Blast
The following BLAST results are available for this feature:
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