|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061389 ID=TCONS_00061389|Name=TCONS_00061389|organism=Clytia hemisphaerica|type=transcript|length=267bp
ATTACGCATAACTGGAGGGAAGCTAGCAGGAAAACTGAATAGAGATAGAT
GCGAAGACAAGTGTATTGAAGATGACCACTGCTTCGCATTTGAATATCCT
GTACCTAACAAATGTTGGCTGTTTCGCAAAGCTCCACCATCATCACTACA
ATTTAAACAAAGgaACATGGGAAACACAACAACACAAAAAGCAAAAGAAT
TCACATTAGACAAGAAAGAAGATTTTGgaactttcattttttacgatGCG
TTAAAGCTTCTCGGACA Run BLAST on NCBI transcript from alignment at scaffold_358:260554..261612+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061389 ID=TCONS_00061389|Name=TCONS_00061389|organism=Clytia hemisphaerica|type=transcript|length=1059bp|location=Sequence derived from alignment at scaffold_358:260554..261612+ (Clytia hemisphaerica)
ATTACGCATAACTGGAGGGAAGCTAGCAGGAAAACTGAATAGAGATAGAT
GCGAAGACAAGTGTATTGAAGATGACCACTGCTTCGCATTTGAATATCCT
GTACCTAACAAATGTTGGCTGTTTCGCAAAGCTCCACCATCATCACTACA
ATTTAAACAAAGGTAGGTACTGGCTTCGCCAAACTCGTTCCTATATAGTC
ACATTATTATacgattctgatagcgctcaagAAAGGTGGGTGTattccaa
tgaagtataagcccgaagggctagaatcgaatctctttggtaggatttga
agccaacaaatcctaccaaagttgcgcggccttgagcggctcgcctggtc
tTTACAcagatgacagattgaaactaaaatttaccactaaatttcgaaaa
aaatatcaatcgtaaacaaaggaattgctagattcaatctgtcgtcaaaa
atacggcgcattttctaaggctttactttttcttgcctgggaaaggttag
agattctactctagcccttcgggctttaaactcaatggtgtaTTCTCATT
TCCGCACAAGGTTTATGtcacttttccggaatctttccgctatttttccc
ggAATAATCGACATGAAATAGTAAAGGCTTTATTTTTAAAGGTACGGAAA
ATGTTGCTATTTTTCAACCATCtgaagtcctggtctttttccgtTAGAAA
AGTAGCTGGGAGTGGgagaatattatttattttccctCCTTTATTAAGGG
GACAAGCTTCAAACTTTCTACAGGAATTTCCGGAGTGCTTCAGAGGCCAT
TTTACCAATCGGGAAACTGGTGAACTTCCCGATTTGGAAAGTCTAGCCAT
TTTGGGAAGTTTTCCACCTTCCCGTTTGGGAAAtattcccgttaaggcaa
tagttgcatTTTCCATGTAGTGATCCCGACTGACcgtatttttgttattt
ttaggaACATGGGAAACACAACAACACAAAAAGCAAAAGAATTCACATTA
GACAAGAAAGAAGATTTTGgaactttcattttttacgatGCGTTAAAGCT
TCTCGGACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061389-exon-scaffold_358-1491911889:260554..260715 | TCONS_00061389-exon-scaffold_358-1491911889:260554..260715 | Clytia hemisphaerica | exon |
| TCONS_00061389-exon-scaffold_358-1510915933:260554..260715 | TCONS_00061389-exon-scaffold_358-1510915933:260554..260715 | Clytia hemisphaerica | exon |
| TCONS_00061389-exon-scaffold_358-1575043694:260554..260715 | TCONS_00061389-exon-scaffold_358-1575043694:260554..260715 | Clytia hemisphaerica | exon |
| TCONS_00061389-exon-scaffold_358-1491911889:261508..261612 | TCONS_00061389-exon-scaffold_358-1491911889:261508..261612 | Clytia hemisphaerica | exon |
| TCONS_00061389-exon-scaffold_358-1510915933:261508..261612 | TCONS_00061389-exon-scaffold_358-1510915933:261508..261612 | Clytia hemisphaerica | exon |
| TCONS_00061389-exon-scaffold_358-1575043694:261508..261612 | TCONS_00061389-exon-scaffold_358-1575043694:261508..261612 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_358 | supercontig | scaffold_358:260554..261612 + |
Blast
The following BLAST results are available for this feature:
|
