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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061374 ID=TCONS_00061374|Name=TCONS_00061374|organism=Clytia hemisphaerica|type=transcript|length=676bp
TTTGTCTCTCCAAGATGGATGTTACCTAGGGGAGggACAATCTATTACCC
AATGGAGCCAATTTTCTTTCAATCCATCAAAAATCCTTACATATTGAAAT
GTGTTGATGGCATAATGGTTGATGGAAACCATCAGGGAATAAGCAAAAAG
GTTTTCAGGTCATGCTCGCTGAGGGATCATTTAGGAGTGTATCCATCATG
TGACACTTCATGGCTTAATGCAAGAGAAAAACAAACCATTAATCCACTTG
CAATCGGTCAAATAGTCAATAATGCACCAATAAAGAATAGAGCCAACGTT
GTTTACCAGGAACTAGATATTCCATACACATTTCCAACAAATCTTCGTCA
ATATTTACCCAATGTTCGATTCAAACCTATGGATATTGAGTATCTTCAAT
ATGCAGATGAAAAAGAGCTTGAAAGTCTTCCATACATCAGAGTGATTGTT
TTGGTTGCTTTGAGAGATATTCATGCTGGAGAAGAATTATTTTCATCATA
TTTCACAGAGGTTGAATATGATTAGAAAGGATAATGTTGATAAAGATTAG
CTTTATTTATGTTAGGGTAGATCGCCAACTACTATTTTtagcatgatgtc
aaaaaattcaaagtgtagtatttttttgtcaaaattttatctattataag
acattttgcgcaatttttaacctcct Run BLAST on NCBI protein sequence of TCONS_00061374-protein >TCONS_00061374-protein ID=TCONS_00061374-protein|Name=TCONS_00061374-protein|organism=Clytia hemisphaerica|type=polypeptide|length=174bp
FVSPRWMLPRGGTIYYPMEPIFFQSIKNPYILKCVDGIMVDGNHQGISKK
VFRSCSLRDHLGVYPSCDTSWLNAREKQTINPLAIGQIVNNAPIKNRANV
VYQELDIPYTFPTNLRQYLPNVRFKPMDIEYLQYADEKELESLPYIRVIV
LVALRDIHAGEELFSSYFTEVEYD Run BLAST on NCBI transcript from alignment at scaffold_358:117225..131815+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061374 ID=TCONS_00061374|Name=TCONS_00061374|organism=Clytia hemisphaerica|type=transcript|length=14591bp|location=Sequence derived from alignment at scaffold_358:117225..131815+ (Clytia hemisphaerica)
TTTGTCTCTCCAAGATGGATGTTACCTAGGGGAGGTAAGATTTCACAGCA
GCAGACAGGGAGCCCGAGTTCCATCATCATACTTTTTTTGgatcaagagc
agccaccggctctAGGAAGTAtgatgaaatatctgttcttgaggtccctt
ctcctggaaaaaactcTCTGTTCTGTATCttgggctctcctggattatat
catctgttctgggaaaaaaatgggactcctacctggaaaatgtatatctg
ttctctagCTAGAAATAtcatgctcctggaaaaatataacagctattcta
gcaactccagaagtcatgcaactttcgttgacgtcaaaccaaatgtatca
tttttccgtgaactttgaacccttggaactttttttctgtgtatgctaaa
gcgttccggtttttactaaatgaaagcccgtgatcttagctttccagcgg
tatacagtacaacactgtggacacgggctagacggcaaattggtaaaatg
ccgaacgttttgcaacattttgaaaattgtttgctgaCGGGAGAAAAACA
ATTTGCaactatcgaagaacaaatgtgtctggaaacggaggaaaatgtat
ttggatttggaggctgaaactttgtatgtttatcagaaaaagggtgagga
attcaaaaatcacaatcgctaattctagttctttcatttttatgtagttt
ttcaaacttttttgcttctttagcatgggaatgtcccaaaaaaaagtttt
tatttctgccgaaatggattttcttttcatttggggtttctcctttcaga
aaaacttattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgaatt
tttccaagctattttcctaaccttttttttgacatttttagtcaaatttt
tgacactaaaatttgaatatctttacaaccacttatcctctggaggccta
agacccctcattttctttctttttcaaagctctacaagataggatagact
ttgaaaaaaaaattaaaatttgaaaaatcttctggagttgctagcTATTC
TCTAATGAAAGTTAAAATACTCCTaaaaaatgagaccttttaagaaaatt
atgaagctgCCTGGAAAAGAAATCTGACATCTGTTTGTGTTATTCACAAT
TTACAGtagtctggagaccatactctgttacaaaaatatttctatcctgt
taaaatcccaacaacttcactgaaatacagagtatggaatcccggctact
actgtctatactttgatatttttttgaaaccacatagacagagaagtcgg
gtctcccagctaaaTTTACAGTAGCAcctggattttttgaacagattgtc
tgctggaaaattgtaaaatgtgctcctggattttgAGAACAGACTACTGA
CAGATGTTTTTAAGACGACCCCTagattttacctgggtgttttgaggaaa
gtctctcctagatttatccataaaatttactctcctggaaaaaaagaaca
gacagtctgggaaatcctctcaattgcacgcttatgttccgaggccgtaa
gcgcgcaattgcacggttatcaaaatggcagaatttttaagcgtgtaaat
tacacgcttatcgaaattgttctgaaacgggcggtaagcggtaagcgtgc
aattgcaccctttattattctgacacgcaattccttcccacgtgcgtttg
gtttgggaatgcgaaacacgaacgcaaactacccatgtctaaacttttca
atatatctccagaactaacagattttttgaaattctgtaaaaagNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaaggacaaaaggtatag
gaagctttactgaaagagggataaggctgggacaatctatttaaaagata
tggacataaaaaaggcacttttttgggtgataattgaGATTTTAcataga
aactttaattctcttacccccgtctcggccCCCCCcggatatgagcaagg
gaaccatgatggccacccctactgaaaatttcagatcaaaacaaacaagg
aattaattcctgtaactcgaagaaaattggaaaaagctggtttttgactg
tttctgatcctaaagtgcgattttttggtaaaagctatgcaatttatgtt
tggatttctagaaagcttacccattcattgttaatacattttttattcgA
AAGTAAtatcttcatggaataaaaagatatagtcaaatcttgtagggttt
TTTGCCAAAtgcgattttcgcatttcgccattttaccctacgcaaacgca
cgtgttccgaaagctctgttgaatttcaaaagcctagggcagttttactc
aaaatttatcgtagaagaagattccgtaaaaatggattgcccgttaaacc
atgccttcgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaaccggggcgggagcgg
gcgtaaattataaccatgcaattgcgcgcttacgccctcggaacataagc
gtgcaattgagaggatttcccagactgacaGATATTTCAACTAAAtctgc
cggcggctgctcttgcTGGATCTGAGAATCCAAACTTTGTTCCAGCCTCT
CGCGTGGCAAGTtgcacactcgttatttgttgaTTCCATTGGGCGTTAGG
CGGTTTAGGTAGGGTgaacaggccaaaattttcccctcaatttttcgaaa
ccaaactaattttatttgaaagtccttacctttgtgagaaaaatgagggg
ttatttattagaattggttaagtattcccaaagttattccattttcaaaa
cataaaaaaatcaccttcaaacagttagtcacactaggaaatctagcttt
cagaaaaaacaacatcagtcatctacaggatgcatttgcacaacaaggat
gagagttacctgaatcaagtctgcaagacaattaattaaaacttgaaagt
ttgaaacaaaataaaacgtgcatcagccaaaatcaaccaaccaaaatttg
tcattcaattcctgagacagcgcttcaatttttaaggcctaagtaaaaat
atttccgcacatgtaaatgggtcattgtttaaggtccggcaaaatttccg
ggaaacagcctatcccGTGGtgtgcggatctaggtgggttccgcctcccc
cgtagatctttttcttgggaagttgatcttcaaattagttttcaaggttg
gtttggctcaaattttttcatctatggctcaagttttaggcaatttctca
aagtttttgaaaatgttaatttcattaaaaagtgccgggttattttttga
tgaatccctttagaagttttgcggcgcatttttttgcttgagagtcaggt
aaacgataaagcgctttcgcagcattaatctttgatacgcattttggcgg
gaggctagtgtgactaactgtcaaagATGATGAAAATCTAGTTAGTCTTT
CGTGAAACTTcatcagttttttttacttgtttccctgatgattcctgatt
gatttaaaaaaaagaatgaacagatttggatgatttaaaggtaagtacta
atgcattgaagttcatttttgtaaattcttcttCGTTATGCACAAAAAAT
CctgacgagtgcgcaccctagtTTGGTTGACaagcgttctctaattctcc
aatcggcgtccggtcattttgaatgaaaacaaaaagttaaaaaagggcgc
gctaccgtgagattgggtaacttgcatcagtggaggcaaacatgcatagc
cctcaaataaatgacatgtctggtcattaaaatccatagtgtcctccagg
gtttgttccccccaccaaattcttgatttttttaaatctcccccctcttt
tttttccccctatgacCTTTCGGTTTTTTAGTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNtttcccccctcttttttttcccccctttac
tattcaaattttcattttcccccctcacccattctaaattggaaaattgg
tttcccccccctttataaagggggggggaggacactatggatTAAATCCA
tatacgcagctctgctcgcagctgtactataccatttttgttttgattca
actttgtattttaatgaccagacaggtcattcactTGAGGGCTATGTATG
TTAGCTTCCACTGATGCAACTTACCCGATCTCATggtatcagtgaaagtt
atcgtgacatgttattaacaaaagtatgattgataaacctggtggagtta
tcaaaacaaatttgttgtcaaagagatttcacagtaagtgaaaatacagg
ccagatatcaaacagtcccatgtttcgccccaagttagagcagttggcgG
TACTCACTTTATCTACTAGACGGTTCCCATTGTCGCAAATGTTGGTTTAG
CTTTACTATcaaaagcccttaggatgataaagatggttgttgatgctctc
taactttatttttaaggggaattcaaattagttttcatcaACCACGGGAG
TACATCAAGTAGTTGGAAGATTTCTAGTctttttatgcttcaaattaatt
gaattagAGAATGTGACTTAAAATCTTCACCATAAAATTATCTTAGTAAA
CAATAAACTGTcaattatgagagtttcttcaggaagtttgaaacgatttc
aatcaaatcgaaaacgggaacttatagagcagtaaaacgtcaaattgaga
gCATCAATATATCATCTGTGTATAAGAATATggaaagtaaataaaaaaat
gttgctGTATTTACGAAGAAAAAAAGTCGCATTCTTTCATTCAAATTGAA
GCATAAAAAGGTATTTACGAGAAATCTTCTAACTACTCAATTTACTGGTT
GATGAAAACTAATTCGAATTccccttaaaaataaagttagagagcatcaa
catctttatcatcctaagggcttttgatgtgcaagctaaaccggcgtttg
tGACGACAGGGACCGTCGAGTTAGTTCTATTTGTTTTCAGTACAGAAGCA
TCTTTAATtaatcattgaaaaaataacttgagcaaagaaaaaactttttt
ttctcttcttttctgtttaccATAGACGCCTTTTTATGttatgttttctt
ttctcttcttaTTTTATCTCTTACCACTTTAGAAAGTTGGCTGTATTTCC
CCTAATTTATTAGTTGCTGGGTATTTACaatattaaaaatgttttagaCA
GAGTAACCAGGTAAAGATGGTTGGaatctaccgggtgcgccacaaaaaag
tttctctctttgaaactaattttctcaaaatctaaaatttttaaaagatc
cactcctatttcattggaaagaagaaagatagacttagattttgatgggt
catttatttaattcgattcattagatcaaaagttatgcttaattgaataa
aaaagttactttcagaaagtgctcgaaaacgtcaaaaatcgacctatcaa
attttttattttaaatttggcaattgcaatagcctttacacaattaagag
catttttccgtaacaaaacacataaattttgaaacgaaagggtcgaaagg
gtttaaaatcctCATCAACATTAATCTAATTTTGTTTTACTGgaattttt
cttagatttttggttctagactggataaagtctatgtaaggctggatcta
cctcgaaacccatatttgatgtatttttatgaattttaccagattatttg
gccttttttgacgaattttcttcatttcattgaaattcaacctcatttta
aataacttcagcctcctttaaataacaaaaggtcatttagacagctaatt
atcatttttaatgactgaaacgaaaatactgatatatcatATAACTAttc
ttctgtttaatttgataggtcgatttttaacgtttttgagcattttctaa
aagtaacttttttattcaattgagtataacttttgatctaatgaatcgaa
ttcaataaatgacccaccaaaatttaagtttatctttcttctttccaatg
aaataggaatggttcttttaaaacttttagaattcgagaaaattagtttt
aaagagagaaacttttttgtggcgcacccggtaacTTAtcctttttatat
tttatattataaaagaGTAACATAAAAATGTTGTTTGACTTTGCTGactc
ttttttgaaaacaaaaattatgtCTTCTGGATTATGTGCAGATGGTTACA
GTGTTGAAAATCTTATCGTCAataaacaaaaaccaaaaacttTTAACCAG
AAATATTTCATGTCTGAGTATTTTGTGAAGTGTCCTGTTAAAATTGTGTT
AGAGTTTCCATTCCTTATTGATATATCAGCAATTGTATTGAACCCAAAAG
GATCAACTCATCATTGCAAAGTTATTGAAGTACAAGCAGCTTTTCAACGT
CCAATGAAACCAAAAGAAACCAACCAGATTTGTTCATATGGAACAGATTT
ATCTTCATATTGTCATAACAAACCTTTACATTTGGTGGCTAAGTACAATC
AGAAAAACTATGAGAATCCAAACTTTGTCCGCAAGATCATCTTTTTTAAT
GAACATCATTCcatacaacaacaacaacaacagcagcaTGGGTCAATCAG
GATACCTCTGAAACCACTTGCGTGCATTTCATCATGTAGTCATTTGGCCT
TCAATATAACATGGGCAACAATACCTGTCATAAGCTCACTAGAAGTTATG
GGGACACCATCTCAAAGGAAcccaattttctcaaaaacatcAATAGACAT
CTTGTTAGCAAGTATCAGATCTTTTGAGAATGATGAGCCACTGAAAACCG
AAATAAATGCCAAACCAGAACCAGCCCCTAATAATGGTGATTTGAATAAA
TATACTTACATAAATAACTTAACTTTGGAAGAGACACCTTCAGAATTTAT
TGATCCAATAACATGTGCTATGATGACAATACCACTTCTGCTACCTTCTG
GTAACAACATTGACCAAACAACTTATGATAAGTTTGTTTCTACTGAAAAA
ACACATGGAAGATTACCATCTGATCCTTTCACTGGTTTGGTTTTTCATGG
TGCTCAAAAACCTATTCCAAACACTACTTTGAAATTAAGGATAGATGATT
TTATATTGAAAACTAATAAGAAAGATGTACCAAAGACATATTTGCTTGGA
TCTACTGTATCAGGGAAAATCCCAACAGTACTTTCAAAGAAACCCAATAC
TCCTTGCAACAGTAGTACAGATTCTGAACCATCAACAAAACGTCAGAAAA
TGGAACCAAACCATCAGACAGAATTAAAAGACTCGCTCAATGATGCGTTG
TCACAAACATTATTTACATTGCCAAGTTGTTTTGAACGTAAAACAGAACC
TGTCATCAAATGTTTGGAATGCGATAAGACTGATAAATTAGATCTATATG
TTCTCCCATGTAAGCATTTATTATGCAGAAAATGTTTACAAAGCACAACA
AAACAATCTAAGAAATGTAGCAACTGTTCAATGTTTTTCAAGCACAACGA
AGTCAAAAGATTTGGATCTTAGTATGGATTATTTTTTAACCAATTATTTT
Gtgataaaaatagaattttcttgtttttttaaatcatttttgggttgtca
tctttgttgtttttatacAGTTACTTTTCAAGTTCTGCAACGTCTCAAGT
CAGGTTACGATTATAGAttcctgaattttattgtttatctTGATTGACCT
GTGAAAAATTTGCATTGTTTTTGAAAGCTTGAGTTTTCAACCATGTTTAG
ATGTTACAGTTTTGTATCGCTCCGAAACAAAATGGTTTCGAAACACTGTT
TGAACATCAAAATTAGAACTAATTTCATTGGAATGGAACTGCTCCATTTC
CTTGCTCGAAAATGTTCCGAAATCAGTATGAATACTTCCAATCCTCTGTA
ACAAACCGTAACATCTGAACATGGTCTTTGTATTGTGTTTTTGTATACAT
TGTTGTACTAATTTTTATACCACAATaaataggaatgaaaataagaattt
tcaaGAAATGGCTTGCAAGTATTAAAAGCTACAGCTATCGATCAACACCT
TGGCTCTTACTTACTTGGAAGAAGAGGTTGGTCAATAATATTATTTCAAC
CCAATATTGCAATAATTCAAGATTATTATACTTTTTAGCGTTAATCTAAG
ATGTTATGAGATCCTTAAAATTAGACTATTATGgttcaaaatcaatttat
ttcTCAATATTTTAGAAGTATAAAACAAGTATCGAAAAGCGAAAACTCTT
CTTTTACTGAAAAAGAACCCTTGTTCTTATCACAACTCCAAGAACTTTTC
CTCAAgcttcaacaaaacaaaaatggaaagCTTACTCCAAGTCAAGTTAT
GGAGCAAAGCTATGGATTTTCAATAGAGATACATCAAAGCACATTGCCAA
ACGCTGGATTAGGTGTTTATGTGAAATCGGGTACAGTACCAAAGTATGGA
ATCGCATCTATGTACCCAGGTATAAACCATACTTGGATAATACTTACTTA
TCACTTACACATCTTATTGCAATCTTAAAGTCATCACAATTTTAAATGCT
GGACCTTATAAAAtatcagatgagatggagtttttataacatacttttaa
ttggtcatttgaagtaataaagatgacgcgttctttagaaaaagtaacaa
aatagtTTTATTACTGGtaaacgaccaaccaaatcaaataagagcttgta
aaaactccatctcgtctcGAAAATATTGGCTGTCACCTGGCCGAACAATC
TCGAAACCAGCCGTGCCAAAAACTTTATTGttattttaaagaagaatttt
tttcttcaaatcaaaacTTCTATTATGTCTGTCTCTTTCTATGATAAACC
TAATAATCATGAATTCCCTTTTAGATCTTCGTTGTCATTTCAAAATTACC
CAAAATATAAACAGATTTGACCAATGTTCCTCCAAAATCTAGAGTCAGGT
GACAGCTAACCAATATAGTTTTAAGTTCGGCCTAAATTATAGAGGCATTG
TTTCTCAATGACATGATAGATATAGTCACTGTTAGgctatattttatttt
gaagggACAATCTATTACCCAATGGAGCCAATTTTCTTTCAATCCATCAA
AAATCCTTACATATTGAAATGTGTTGATGGCATAATGGTTGATGGAAACC
ATCAGGGAATAAGCAAAAAGGTTTTCAGGTAAATGGTAATATTCTTCTCT
TCAATGtttatagaaaaatataatagcAATTACCTTTGCGAAAAAGTGAG
TATTTTTATTGACCAAGGATTTGTTGAATTCATTGGTTCTATtgtcaata
atatttttgtattttctaaattcatttcaaaatttcaaaaagctaAAAGT
AGTATATTGATTTAAAGTTTCATACCTAACAGCAATTATAAGACGTACAA
AAACGATCATAGACGCAGGTTTGATGATAGGCATTAGGTATAAAAGTTGA
AGTAATAATGTGctactttttactttgaaattttgaagtaaATTTACTGC
ACAGTCTCAAATGACGTACAACAACAAAATggttttttaataattttttg
tgAGTAGGAATAAGCTGCTTCTGAATGAAATTCCAATCCCTTTCCTCTGG
TTTAATATAGGTCATGCTCGCTGAGGGATCATTTAGGAGTGTATCCATCA
TGTGACACTTCATGGCTTAATGCAAGAGAAAAACAAACCATTAATCCACT
TGCAATCGGTCAAATAGTCAATAATGCACCAATAAAGAATAGAGCCAACG
TTGTTTACCAGGAACTAGATATTCCATACACATTTCCAACAAATCTTCGT
CAATATTTACCCAATGTTCGATTCAAACCTATGGATATTGAGTATCTTCA
ATATGTGGACGAAAAAGAGCTTGAAAGTCTTCCATACATCAGAGTGATTG
TTTTGGTTGCTTTGAGAGATATTCATGCTGGAGAAGAATTATTTTCATCA
TATTTCACAGAGGTTGAATATGATTAGAAAGGATAATGTTGATAAAGATT
AGCTTTATTTATGTTAGGGTAGATCGCCAACTACTATTTTtagcatgatg
tcaaaaaattcaaagtgtagtatttttttgtcaaaattttatctattata
agacattttgcgcaatttttaacctcctaaataaaaaatccatcattccc
caggggggttcTTTTTGACTCGCACTAAagcaaaaaatgagtaaaaatgg
cattttttgcctAATTTAAGTCCATGAAAGGCCATGAAaaggtcaaaatg
gtttctaaattgtgtcttgtactaatattcaacatgaAAAGAGATCGAGC
GAGATCGCTgtttttccataatggcggatttgaGCAAATTTTTTACCCAA
ACCATTTTAGTTTTcccagagtatttccagaatactttcaacactaAAAT
ATTTCAGGAccccatttgaaaccatttgtggctttttagcctgaaattga
aacaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACTCGCACTAAagcaaaaa
atgagtaaaaatggcattttttgcctAATTTAAGTCCATGAAAGGCCATG
AAaaggtcaaaatggtttctaaattgtgtcttgtactaatattcaacatg
aAAAGAGATCGAGCGAGATCGCTgtttttccataatggcggatttgaGCA
AATTTTTTACCCAAACCATTTTAGTTTTcccagagtatttccagaatact
ttcaacactaAAATATTTCAGGAccccatttgaaaccatttgtggctttt
tagcctgaaattgaaacaatGAGCGATCTGGCttgggttattttgtcttt
tcatgttgaatattagtacaagacacaaTATTTATTAGACAcaatgaatt
ttttgactttgccattaattgacgatctaccctattatattttttatgta
tGAATTAGCAAtacttttttctaaaactcttaGTTTTGTAATGTAAATAA
ATTgtatttaaaattaaattttNTAGAAAAATATAATAGCAATTACCTTT
GCGAAAAAGTGAGTATTTTTATTGACCAAGGATTTGTTGAATTCATTGGT
TCTATtgtcaataatatttttgtattttctaaattcatttcaaaatttca
aaaagctaAAAGTAGTATATTGATTTAAAGTTTCATACCTAACAGCAATT
ATAAGACGTACAAAAACGATCATAGACGCAGGTTTGATGATAGGCATTAG
GTATAAAAGTTGAAGTAATAATGTGctactttttactttgaaattttgaa
gtaaATTTACTGCACAGTCTCAAATGACGTACAACAACAAAATggttttt
taataattttttgtgAGTAGGAATAAGCTGCTTCTGAATGAAATTCCAAT
CCCTTTCCTCTGGTTTAATATAGGTCATGCTCGCTGAGGGATCATTTAGG
AGTGTATCCATCATGTGACACTTCATGGCTTAATGCAAGAGAAAAACAAA
CCATTAATCCACTTGCAATCGGTCAAATAGTCAATAATGCACCAATAAAG
AATAGAGCCAACGTTGTTTACCAGGAACTAGATATTCCATACACATTTCC
AACAAATCTTCGTCAATATTTACCCAATGTTCGATTCAAACCTATGGATA
TTGAGTATCTTCAATATGCAGATGAAAAAGAGCTTGAAAGTCTTCCATAC
ATCAGAGTGATTGTTTTGGTTGCTTTGAGAGATATTCATGCTGGAGAAGA
ATTATTTTCATCATATTTCACAGAGGTTGAATATGATTAGAAAGGATAAT
GTTGATAAAGATTAGCTTTATTTATGTTAGGGTAGATCGCCAACTACTAT
TTTtagcatgatgtcaaaaaattcaaagtgtagtatttttttgtcaaaat
tttatctattataagacattttgcgcaatttttaacctcct Coding sequence (CDS) from alignment at scaffold_358:117225..131815+ >TCONS_00061374 ID=TCONS_00061374|Name=TCONS_00061374|organism=Clytia hemisphaerica|type=CDS|length=1575bp|location=Sequence derived from alignment at scaffold_358:117225..131815+ (Clytia hemisphaerica)
TTTGTCTCTCCAAGATGGATGTTACCTAGGGGAGggACAATCTATTACCC
AATGGAGCCAATTTTCTTTCAATCCATCAAAAATCCTTACATATTGAAAT
GTGTTGATGGCATAATGGTTGATGGAAACCATCAGGGAATAAGCAAAAAG
GTTTTCAGGTCATGCTCGCTGAGGGATCATTTAGGAGTGTATCCATCATG
TGACACTTCATGGCTTAATGCAAGAGAAAAACAAACCATTAATCCACTTG
CAATCGGTCAAATAGTCAATAATGCACCAATAAAGAATAGAGCCAACGTT
GTTTACCAGGAACTAGATATTCCATACACATTTCCAACAAATCTTCGTCA
ATATTTACCCAATGTTCGATTCAAACCTATGGATATTGAGTATCTTCAAT
ATGCAGATGAAAAAGAGCTTGAAAGTCTTCCATACATCAGAGTGATTGTT
TTGGTTGCTTTGAGAGATATTCATGCTGGAGAAGAATTATTTTCATCATA
TTTCACAGAGGTTGAATATGATTAGTTTGTCTCTCCAAGATGGATGTTAC
CTAGGGGAGggACAATCTATTACCCAATGGAGCCAATTTTCTTTCAATCC
ATCAAAAATCCTTACATATTGAAATGTGTTGATGGCATAATGGTTGATGG
AAACCATCAGGGAATAAGCAAAAAGGTTTTCAGGTCATGCTCGCTGAGGG
ATCATTTAGGAGTGTATCCATCATGTGACACTTCATGGCTTAATGCAAGA
GAAAAACAAACCATTAATCCACTTGCAATCGGTCAAATAGTCAATAATGC
ACCAATAAAGAATAGAGCCAACGTTGTTTACCAGGAACTAGATATTCCAT
ACACATTTCCAACAAATCTTCGTCAATATTTACCCAATGTTCGATTCAAA
CCTATGGATATTGAGTATCTTCAATATGCAGATGAAAAAGAGCTTGAAAG
TCTTCCATACATCAGAGTGATTGTTTTGGTTGCTTTGAGAGATATTCATG
CTGGAGAAGAATTATTTTCATCATATTTCACAGAGGTTGAATATGATTAG
TTTGTCTCTCCAAGATGGATGTTACCTAGGGGAGggACAATCTATTACCC
AATGGAGCCAATTTTCTTTCAATCCATCAAAAATCCTTACATATTGAAAT
GTGTTGATGGCATAATGGTTGATGGAAACCATCAGGGAATAAGCAAAAAG
GTTTTCAGGTCATGCTCGCTGAGGGATCATTTAGGAGTGTATCCATCATG
TGACACTTCATGGCTTAATGCAAGAGAAAAACAAACCATTAATCCACTTG
CAATCGGTCAAATAGTCAATAATGCACCAATAAAGAATAGAGCCAACGTT
GTTTACCAGGAACTAGATATTCCATACACATTTCCAACAAATCTTCGTCA
ATATTTACCCAATGTTCGATTCAAACCTATGGATATTGAGTATCTTCAAT
ATGCAGATGAAAAAGAGCTTGAAAGTCTTCCATACATCAGAGTGATTGTT
TTGGTTGCTTTGAGAGATATTCATGCTGGAGAAGAATTATTTTCATCATA
TTTCACAGAGGTTGAATATGATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061374-exon-scaffold_358-1491911889:117225..117258 | TCONS_00061374-exon-scaffold_358-1491911889:117225..117258 | Clytia hemisphaerica | exon |
| TCONS_00061374-exon-scaffold_358-1510915933:117225..117258 | TCONS_00061374-exon-scaffold_358-1510915933:117225..117258 | Clytia hemisphaerica | exon |
| TCONS_00061374-exon-scaffold_358-1575043694:117225..117258 | TCONS_00061374-exon-scaffold_358-1575043694:117225..117258 | Clytia hemisphaerica | exon |
| TCONS_00061374-exon-scaffold_358-1491911889:128479..128602 | TCONS_00061374-exon-scaffold_358-1491911889:128479..128602 | Clytia hemisphaerica | exon |
| TCONS_00061374-exon-scaffold_358-1510915933:128479..128602 | TCONS_00061374-exon-scaffold_358-1510915933:128479..128602 | Clytia hemisphaerica | exon |
| TCONS_00061374-exon-scaffold_358-1575043694:128479..128602 | TCONS_00061374-exon-scaffold_358-1575043694:128479..128602 | Clytia hemisphaerica | exon |
| TCONS_00061374-exon-scaffold_358-1491911889:131298..131815 | TCONS_00061374-exon-scaffold_358-1491911889:131298..131815 | Clytia hemisphaerica | exon |
| TCONS_00061374-exon-scaffold_358-1510915933:131298..131815 | TCONS_00061374-exon-scaffold_358-1510915933:131298..131815 | Clytia hemisphaerica | exon |
| TCONS_00061374-exon-scaffold_358-1575043694:131298..131815 | TCONS_00061374-exon-scaffold_358-1575043694:131298..131815 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_358 | supercontig | scaffold_358:117225..131815 + |
Blast
BLAST of TCONS_00061374 vs. Swiss-Prot (Human)
Match: SETD9 (SET domain-containing protein 9 OS=Homo sapiens GN=SETD9 PE=2 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 4.668e-46 Identity = 82/174 (47.13%), Postives = 110/174 (63.22%), Query Frame = 1
Query: 13 RWMLPRG-------GTIYYPMEPIFFQSIKNPYILKCVDGIMVDGNHQGISKKVFRSCSLRDHLGVYPSCDTSWLNAREKQTINPLAIGQIVNNAPIKNRANVVYQELDIPYTFPTNLRQYLPNVRFKPMDIEYLQYADEKELESLPYIRVIVLVALRDIHAGEELFSSYFTEV 513
+ ++P+G GT+Y EPIFFQSI NP+I +C+DG+++DGN +GISK V+RSC+ RD LG D++WL + + NPLA+GQ VNN ANV YQE D+P FP L+QYLPN+ + Y + L R +VLVALRDI+ GEELFS+Y+T V
Sbjct: 142 KGLVPKGAVVSMYPGTVYQKYEPIFFQSIGNPFIFRCLDGVLIDGNDKGISKVVYRSCNGRDRLGPLKMSDSTWLTS---EIHNPLAVGQYVNNCSNDRAANVCYQEFDVPAVFPIELKQYLPNIAYS--------YDKQSPL------RCVVLVALRDINQGEELFSNYYTIV 298
The following BLAST results are available for this feature:
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