TCONS_00061373 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061373
Unique NameTCONS_00061373
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1586

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061373 ID=TCONS_00061373|Name=TCONS_00061373|organism=Clytia hemisphaerica|type=transcript|length=1586bp
CTTTGGCCTTGTGTTTGTCTCTCCAAGATGGATGTTACCTAGGGGAGaGT
AACATAAAAATGTTGTTTGACTTTGCTGactcttttttgaaaacaaaaat
tatgtCTTCTGGATTATGTGCAGATGGTTACAGTGTTGAAAATCTTATCG
TCAataaacaaaaaccaaaaacttTTAACCAGAAATATTTCATGTCTGAG
TATTTTGTGAAGTGTCCTGTTAAAATTGTGTTAGAGTTTCCATTCCTTAT
TGATATATCAGCAATTGTATTGAACCCAAAAGGATCAACTCATCATTGCA
AAGTTATTGAAGTACAAGCAGCTTTTCAACGTCCAATGAAACCAAAAGAA
ACCAACCAGATTTGTTCATATGGAACAGATTTATCTTCATATTGTCATAA
CAAACCTTTACATTTGGTGGCTAAGTACAATCAGAAAAACTATGAGAATC
CAAACTTTGTCCGCAAGATCATCTTTTTTAATGAACATCATTCcatacaa
caacaacaacaacagcagcaTGGGTCAATCAGGATACCTCTGAAACCACT
TGCGTGCATTTCATCATGTAGTCATTTGGCCTTCAATATAACATGGGCAA
CAATACCTGTCATAAGCTCACTAGAAGTTATGGGGACACCATCTCAAAGG
AAcccaattttctcaaaaacatcAATAGACATCTTGTTAGCAAGTATCAG
ATCTTTTGAGAATGATGAGCCACTGAAAACCGAAATAAATGCCAAACCAG
AACCAGCCCCTAATAATGGTGATTTGAATAAATATACTTACATAAATAAC
TTAACTTTGGAAGAGACACCTTCAGAATTTATTGATCCAATAACATGTGC
TATGATGACAATACCACTTCTGCTACCTTCTGGTAACAACATTGACCAAA
CAACTTATGATAAGTTTGTTTCTACTGAAAAAACACATGGAAGATTACCA
TCTGATCCTTTCACTGGTTTGGTTTTTCATGGTGCTCAAAAACCTATTCC
AAACACTACTTTGAAATTAAGGATAGATGATTTTATATTGAAAACTAATA
AGAAAGATGTACCAAAGACATATTTGCTTGGATCTACTGTATCAGGGAAA
ATCCCAACAGTACTTTCAAAGAAACCCAATACTCCTTGCAACAGTAGTAC
AGATTCTGAACCATCAACAAAACGTCAGAAAATGGAACCAAACCATCAGA
CAGAATTAAAAGACTCGCTCAATGATGCGTTGTCACAAACATTATTTACA
TTGCCAAGTTGTTTTGAACGTAAAACAGAACCTGTCATCAAATGTTTGGA
ATGCGATAAGACTGATAAATTAGATCTATATGTTCTCCCATGTAAGCATT
TATTATGCAGAAAATGTTTACAAAGCACAACAAAACAATCTAAGAAATGT
AGCAACTGTTCAATGTTTTTCAAGCACAACGAAGTCAAAAGATTTGGATC
TTAGTATGGATTATTTTTTAACCAATTATTTTGtgataaaaatagaattt
tcttgtttttttaaatcatttttgggttgtcatctttgttgtttttatac
AGTTACTTTTCAAGTTCTGCAACGTCTCAAGTCAGG
Run BLAST on NCBI

transcript from alignment at scaffold_358:117212..127078+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061373 ID=TCONS_00061373|Name=TCONS_00061373|organism=Clytia hemisphaerica|type=transcript|length=9867bp|location=Sequence derived from alignment at scaffold_358:117212..127078+ (Clytia hemisphaerica)
CTTTGGCCTTGTGTTTGTCTCTCCAAGATGGATGTTACCTAGGGGAGGTA AGATTTCACAGCAGCAGACAGGGAGCCCGAGTTCCATCATCATACTTTTT TTGgatcaagagcagccaccggctctAGGAAGTAtgatgaaatatctgtt cttgaggtcccttctcctggaaaaaactcTCTGTTCTGTATCttgggctc tcctggattatatcatctgttctgggaaaaaaatgggactcctacctgga aaatgtatatctgttctctagCTAGAAATAtcatgctcctggaaaaatat aacagctattctagcaactccagaagtcatgcaactttcgttgacgtcaa accaaatgtatcatttttccgtgaactttgaacccttggaactttttttc tgtgtatgctaaagcgttccggtttttactaaatgaaagcccgtgatctt agctttccagcggtatacagtacaacactgtggacacgggctagacggca aattggtaaaatgccgaacgttttgcaacattttgaaaattgtttgctga CGGGAGAAAAACAATTTGCaactatcgaagaacaaatgtgtctggaaacg gaggaaaatgtatttggatttggaggctgaaactttgtatgtttatcaga aaaagggtgaggaattcaaaaatcacaatcgctaattctagttctttcat ttttatgtagtttttcaaacttttttgcttctttagcatgggaatgtccc aaaaaaaagtttttatttctgccgaaatggattttcttttcatttggggt ttctcctttcagaaaaacttattNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNcgaatttttccaagctattttcctaaccttttttttgacattt ttagtcaaatttttgacactaaaatttgaatatctttacaaccacttatc ctctggaggcctaagacccctcattttctttctttttcaaagctctacaa gataggatagactttgaaaaaaaaattaaaatttgaaaaatcttctggag ttgctagcTATTCTCTAATGAAAGTTAAAATACTCCTaaaaaatgagacc ttttaagaaaattatgaagctgCCTGGAAAAGAAATCTGACATCTGTTTG TGTTATTCACAATTTACAGtagtctggagaccatactctgttacaaaaat atttctatcctgttaaaatcccaacaacttcactgaaatacagagtatgg aatcccggctactactgtctatactttgatatttttttgaaaccacatag acagagaagtcgggtctcccagctaaaTTTACAGTAGCAcctggattttt tgaacagattgtctgctggaaaattgtaaaatgtgctcctggattttgAG AACAGACTACTGACAGATGTTTTTAAGACGACCCCTagattttacctggg tgttttgaggaaagtctctcctagatttatccataaaatttactctcctg gaaaaaaagaacagacagtctgggaaatcctctcaattgcacgcttatgt tccgaggccgtaagcgcgcaattgcacggttatcaaaatggcagaatttt taagcgtgtaaattacacgcttatcgaaattgttctgaaacgggcggtaa gcggtaagcgtgcaattgcaccctttattattctgacacgcaattccttc ccacgtgcgtttggtttgggaatgcgaaacacgaacgcaaactacccatg tctaaacttttcaatatatctccagaactaacagattttttgaaattctg taaaaagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaagg acaaaaggtataggaagctttactgaaagagggataaggctgggacaatc tatttaaaagatatggacataaaaaaggcacttttttgggtgataattga GATTTTAcatagaaactttaattctcttacccccgtctcggccCCCCCcg gatatgagcaagggaaccatgatggccacccctactgaaaatttcagatc aaaacaaacaaggaattaattcctgtaactcgaagaaaattggaaaaagc tggtttttgactgtttctgatcctaaagtgcgattttttggtaaaagcta tgcaatttatgtttggatttctagaaagcttacccattcattgttaatac attttttattcgAAAGTAAtatcttcatggaataaaaagatatagtcaaa tcttgtagggtttTTTGCCAAAtgcgattttcgcatttcgccattttacc ctacgcaaacgcacgtgttccgaaagctctgttgaatttcaaaagcctag ggcagttttactcaaaatttatcgtagaagaagattccgtaaaaatggat tgcccgttaaaccatgccttcgNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaacc ggggcgggagcgggcgtaaattataaccatgcaattgcgcgcttacgccc tcggaacataagcgtgcaattgagaggatttcccagactgacaGATATTT CAACTAAAtctgccggcggctgctcttgcTGGATCTGAGAATCCAAACTT TGTTCCAGCCTCTCGCGTGGCAAGTtgcacactcgttatttgttgaTTCC ATTGGGCGTTAGGCGGTTTAGGTAGGGTgaacaggccaaaattttcccct caatttttcgaaaccaaactaattttatttgaaagtccttacctttgtga gaaaaatgaggggttatttattagaattggttaagtattcccaaagttat tccattttcaaaacataaaaaaatcaccttcaaacagttagtcacactag gaaatctagctttcagaaaaaacaacatcagtcatctacaggatgcattt gcacaacaaggatgagagttacctgaatcaagtctgcaagacaattaatt aaaacttgaaagtttgaaacaaaataaaacgtgcatcagccaaaatcaac caaccaaaatttgtcattcaattcctgagacagcgcttcaatttttaagg cctaagtaaaaatatttccgcacatgtaaatgggtcattgtttaaggtcc ggcaaaatttccgggaaacagcctatcccGTGGtgtgcggatctaggtgg gttccgcctcccccgtagatctttttcttgggaagttgatcttcaaatta gttttcaaggttggtttggctcaaattttttcatctatggctcaagtttt aggcaatttctcaaagtttttgaaaatgttaatttcattaaaaagtgccg ggttattttttgatgaatccctttagaagttttgcggcgcatttttttgc ttgagagtcaggtaaacgataaagcgctttcgcagcattaatctttgata cgcattttggcgggaggctagtgtgactaactgtcaaagATGATGAAAAT CTAGTTAGTCTTTCGTGAAACTTcatcagttttttttacttgtttccctg atgattcctgattgatttaaaaaaaagaatgaacagatttggatgattta aaggtaagtactaatgcattgaagttcatttttgtaaattcttcttCGTT ATGCACAAAAAATCctgacgagtgcgcaccctagtTTGGTTGACaagcgt tctctaattctccaatcggcgtccggtcattttgaatgaaaacaaaaagt taaaaaagggcgcgctaccgtgagattgggtaacttgcatcagtggaggc aaacatgcatagccctcaaataaatgacatgtctggtcattaaaatccat agtgtcctccagggtttgttccccccaccaaattcttgatttttttaaat ctcccccctcttttttttccccctatgacCTTTCGGTTTTTTAGTNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttcccccctctttttt ttcccccctttactattcaaattttcattttcccccctcacccattctaa attggaaaattggtttcccccccctttataaagggggggggaggacacta tggatTAAATCCAtatacgcagctctgctcgcagctgtactataccattt ttgttttgattcaactttgtattttaatgaccagacaggtcattcactTG AGGGCTATGTATGTTAGCTTCCACTGATGCAACTTACCCGATCTCATggt atcagtgaaagttatcgtgacatgttattaacaaaagtatgattgataaa cctggtggagttatcaaaacaaatttgttgtcaaagagatttcacagtaa gtgaaaatacaggccagatatcaaacagtcccatgtttcgccccaagtta gagcagttggcgGTACTCACTTTATCTACTAGACGGTTCCCATTGTCGCA AATGTTGGTTTAGCTTTACTATcaaaagcccttaggatgataaagatggt tgttgatgctctctaactttatttttaaggggaattcaaattagttttca tcaACCACGGGAGTACATCAAGTAGTTGGAAGATTTCTAGTctttttatg cttcaaattaattgaattagAGAATGTGACTTAAAATCTTCACCATAAAA TTATCTTAGTAAACAATAAACTGTcaattatgagagtttcttcaggaagt ttgaaacgatttcaatcaaatcgaaaacgggaacttatagagcagtaaaa cgtcaaattgagagCATCAATATATCATCTGTGTATAAGAATATggaaag taaataaaaaaatgttgctGTATTTACGAAGAAAAAAAGTCGCATTCTTT CATTCAAATTGAAGCATAAAAAGGTATTTACGAGAAATCTTCTAACTACT CAATTTACTGGTTGATGAAAACTAATTCGAATTccccttaaaaataaagt tagagagcatcaacatctttatcatcctaagggcttttgatgtgcaagct aaaccggcgtttgtGACGACAGGGACCGTCGAGTTAGTTCTATTTGTTTT CAGTACAGAAGCATCTTTAATtaatcattgaaaaaataacttgagcaaag aaaaaacttttttttctcttcttttctgtttaccATAGACGCCTTTTTAT GttatgttttcttttctcttcttaTTTTATCTCTTACCACTTTAGAAAGT TGGCTGTATTTCCCCTAATTTATTAGTTGCTGGGTATTTACaatattaaa aatgttttagaCAGAGTAACCAGGTAAAGATGGTTGGaatctaccgggtg cgccacaaaaaagtttctctctttgaaactaattttctcaaaatctaaaa tttttaaaagatccactcctatttcattggaaagaagaaagatagactta gattttgatgggtcatttatttaattcgattcattagatcaaaagttatg cttaattgaataaaaaagttactttcagaaagtgctcgaaaacgtcaaaa atcgacctatcaaattttttattttaaatttggcaattgcaatagccttt acacaattaagagcatttttccgtaacaaaacacataaattttgaaacga aagggtcgaaagggtttaaaatcctCATCAACATTAATCTAATTTTGTTT TACTGgaatttttcttagatttttggttctagactggataaagtctatgt aaggctggatctacctcgaaacccatatttgatgtatttttatgaatttt accagattatttggccttttttgacgaattttcttcatttcattgaaatt caacctcattttaaataacttcagcctcctttaaataacaaaaggtcatt tagacagctaattatcatttttaatgactgaaacgaaaatactgatatat catATAACTAttcttctgtttaatttgataggtcgatttttaacgttttt gagcattttctaaaagtaacttttttattcaattgagtataacttttgat ctaatgaatcgaattcaataaatgacccaccaaaatttaagtttatcttt cttctttccaatgaaataggaatggttcttttaaaacttttagaattcga gaaaattagttttaaagagagaaacttttttgtggcgcacccggtaacTT AtcctttttatattttatattataaaagaGTAACATAAAAATGTTGTTTG ACTTTGCTGactcttttttgaaaacaaaaattatgtCTTCTGGATTATGT GCAGATGGTTACAGTGTTGAAAATCTTATCGTCAataaacaaaaaccaaa aacttTTAACCAGAAATATTTCATGTCTGAGTATTTTGTGAAGTGTCCTG TTAAAATTGTGTTAGAGTTTCCATTCCTTATTGATATATCAGCAATTGTA TTGAACCCAAAAGGATCAACTCATCATTGCAAAGTTATTGAAGTACAAGC AGCTTTTCAACGTCCAATGAAACCAAAAGAAACCAACCAGATTTGTTCAT ATGGAACAGATTTATCTTCATATTGTCATAACAAACCTTTACATTTGGTG GCTAAGTACAATCAGAAAAACTATGAGAATCCAAACTTTGTCCGCAAGAT CATCTTTTTTAATGAACATCATTCcatacaacaacaacaacaacagcagc aTGGGTCAATCAGGATACCTCTGAAACCACTTGCGTGCATTTCATCATGT AGTCATTTGGCCTTCAATATAACATGGGCAACAATACCTGTCATAAGCTC ACTAGAAGTTATGGGGACACCATCTCAAAGGAAcccaattttctcaaaaa catcAATAGACATCTTGTTAGCAAGTATCAGATCTTTTGAGAATGATGAG CCACTGAAAACCGAAATAAATGCCAAACCAGAACCAGCCCCTAATAATGG TGATTTGAATAAATATACTTACATAAATAACTTAACTTTGGAAGAGACAC CTTCAGAATTTATTGATCCAATAACATGTGCTATGATGACAATACCACTT CTGCTACCTTCTGGTAACAACATTGACCAAACAACTTATGATAAGTTTGT TTCTACTGAAAAAACACATGGAAGATTACCATCTGATCCTTTCACTGGTT TGGTTTTTCATGGTGCTCAAAAACCTATTCCAAACACTACTTTGAAATTA AGGATAGATGATTTTATATTGAAAACTAATAAGAAAGATGTACCAAAGAC ATATTTGCTTGGATCTACTGTATCAGGGAAAATCCCAACAGTACTTTCAA AGAAACCCAATACTCCTTGCAACAGTAGTACAGATTCTGAACCATCAACA AAACGTCAGAAAATGGAACCAAACCATCAGACAGAATTAAAAGACTCGCT CAATGATGCGTTGTCACAAACATTATTTACATTGCCAAGTTGTTTTGAAC GTAAAACAGAACCTGTCATCAAATGTTTGGAATGCGATAAGACTGATAAA TTAGATCTATATGTTCTCCCATGTAAGCATTTATTATGCAGAAAATGTTT ACAAAGCACAACAAAACAATCTAAGAAATGTAGCAACTGTTCAATGTTTT TCAAGCACAACGAAGTCAAAAGATTTGGATCTTAGTATGGATTATTTTTT AACCAATTATTTTGtgataaaaatagaattttcttgtttttttaaatcat ttttgggttgtcatctttgttgtttttatacAGTTACTTTTCAAGTTCTG CAACGTCTCAAGTCAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038512XLOC_038512Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061373-exon-scaffold_358-1491911889:117212..117258TCONS_00061373-exon-scaffold_358-1491911889:117212..117258Clytia hemisphaericaexon
TCONS_00061373-exon-scaffold_358-1510915933:117212..117258TCONS_00061373-exon-scaffold_358-1510915933:117212..117258Clytia hemisphaericaexon
TCONS_00061373-exon-scaffold_358-1575043694:117212..117258TCONS_00061373-exon-scaffold_358-1575043694:117212..117258Clytia hemisphaericaexon
TCONS_00061373-exon-scaffold_358-1491911889:125540..127078TCONS_00061373-exon-scaffold_358-1491911889:125540..127078Clytia hemisphaericaexon
TCONS_00061373-exon-scaffold_358-1510915933:125540..127078TCONS_00061373-exon-scaffold_358-1510915933:125540..127078Clytia hemisphaericaexon
TCONS_00061373-exon-scaffold_358-1575043694:125540..127078TCONS_00061373-exon-scaffold_358-1575043694:125540..127078Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:117212..127078 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.0352 17.1098 8.02227 7.56314 5.62867 3.65163 4.17367 4.58957 1.60663 1.5329 1.8011 1.63011 3.01579 3.48783 3.80379 4.28615 2.70779 3.82608 2.7936 2.86598 4.35935 3.64516 13.7661 13.536 3.31947 5.33258 2.26101 2.2622 7.89266 8.53668
Blast
BLAST of TCONS_00061373 vs. Swiss-Prot (Human)
Match: RNF37 (RING finger protein 37 OS=Homo sapiens GN=UBOX5 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.971e-38
Identity = 153/557 (27.47%), Postives = 230/557 (41.29%), Query Frame = 3
Query:   60 MLFDFADSFLKTKIMSSGLCADGYSVENLIVNKQKPKTFNQKYFMSEYFVKCPVKIVLEFPFLIDISAIVLN-PKGSTHHCKVIEVQAAFQRPMKPKETNQICSYGTDLSSYCHNKPLHLVAKYNQKNYENPNFVRKIIFFNEHHSIXXXXXXXHGSIRIPL--------KPLACISSCSHLAFNITWAT---IPVISSLEVMGTPSQRNPIFSKTSID-ILLASIRSFENDEPLKT---------EINAKPEPAPNNGDLNKYTYINNLTLEETPSEFIDPITCAMMTIPLLLPSGNNIDQTTYDKFVSTEKTHGRLPSDPFTGLVFHGAQKPIPNTTLKLRIDDFILKTNKKDVPKTYLLG--STVSGKIPTVL---SKKP---------------NTPCNSSTD-------SEPSTKRQKM--EP------------NHQTELKDSLNDALSQTLFTLPSCFERKTEPVIK---------------------------CLECDKT-----DKLDLYVLPCKHLLCRKCLQSTTKQ-SKKCSNCSMFFKHNEVKR 1442
            M+ +      + +I  + + ADGY VENLI      ++     F +EYF+K PV + + FPF ++I  I ++   G   +   +E+  +         T Q  + G    S    +   LV K   KN        +++F +     +        ++  P         K    +S  +HL   IT  T   IP I  LEV G P++     S+  ID ILL +  +   D  L+          +   +PE       L K   I    +++ P EF+DPIT  +M  P+LLPSG  IDQ+T +K   +E T GR+PSDPFTG+ F    +P+P+ +LK RID F+L   +  +P  +LLG   T    IP+ +   S+K                N  C S+T        SE + K+ K   EP            +H+ +L  SL  AL+ TL ++PS   R T   ++                           C  C +       K  +Y LPC HLLCR CL    +     C+ C       +V R
Sbjct:    1 MVINLCLPQFRPRIHCNKISADGYEVENLISEDLTKRSHG---FRTEYFIKPPVYVTVSFPFNVEICRINIDLTAGGGQNVTGLEMYTSASSSRVSWNTPQCRTLGPAEPSVPDKEAFTLVGKVLLKNQS------QVVFSHRGFKARPPFGAMEATLPSPAVVAQELWNKGALSLSHVAHLRICITHVTGGGIPCIKRLEVWGQPAK---TCSQEVIDSILLVTSENLPQDVALQAPALPMESDCDPGDQPESQQAPSSLQKLAEI----IQDVPEEFLDPITLEIMPCPMLLPSGKVIDQSTLEKCNRSEATWGRVPSDPFTGVAFTPHSQPLPHPSLKARIDHFLL---QHSIPGCHLLGRAQTALAVIPSSIVLPSQKRKIEQAEHVPDSNFGVNASCFSATSPLVLPTTSEHTAKKMKATNEPSLTHMDCSTGPLSHEQKLSQSLEIALASTLGSMPSFTARLTRGQLQHLGTRGSNTSWRPGTGSEQPGSILGPECASCKRVFSPYFKKEPVYQLPCGHLLCRPCLGEKQRSLPMTCTACQRPVASQDVLR 538          
The following BLAST results are available for this feature:
BLAST of TCONS_00061373 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RNF371.971e-3827.47RING finger protein 37 OS=Homo sapiens GN=UBOX5 PE... [more]
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