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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061352 ID=TCONS_00061352|Name=TCONS_00061352|organism=Clytia hemisphaerica|type=transcript|length=1707bp
ttccaacaacgATTTATATTCATTAATATTACTTGTACCACCGAATGATT
TAAAATTTCTAACAAACTTATTCATTTgttgtcataaaaaatcatgaGTC
GGGAATATGTCATGCGAGGATTAATCAAAATCTGCATCAACATGCAGCTT
CATCTTGTGTTTTTGTCCGTTTTCCCTGACATCGATTTTAAGAATACTAT
CAGATTTTGGGGTACAGTCCCCTAAGGCCATTCTGCTCTCACATAAGTGG
TTATCATCTAGGTTAGAAATGCTTTGGTGTTTGTTTACATggaagttttc
atttttatcacttCTTTTGATGCCCATTGCTGGAGTAGTACAATTTGATG
TGGAAGACTGAATCGTTGATGCTATCCGCGTTTGATTTAAATAGGGTGAT
TTACAAGTAACACAACTTGAATTTTCTAGACTATTTGTACTTGAACCAAG
ATTATTTATTCCAACTATCTGAGGTCCTGTAGAGAATGCGTCAAGAGTAG
GGTAAATACTTGAATGTGTGTTGTTACAGGTAGAATGCATAGCATGGTCT
GTCGGTGCTCTTTCTATTTCTTGTTCTCTAGGTTTGTTGTTATTCGAATC
TAGTATACATTGCTGAGTTTTCGTTTGATCAGAGATTTTATGGTCTGTTG
GCACATTTTGGTATAGGTATACTtcaatttgattggctgttcgTCCTATT
GTATTGGCATTCGAAACACAGGCAAGATTATCAATCCCAGTCTGTGATCG
TGTTGTACTTTTCGCACTGCTTCGAATGACTTTCGATTTAACCGTACGAT
AATGAGTTTTAATGGTATCGCGAATTACCGGTTGTATAAAAATATAAGCG
AAAGCATCAGACAAATAGCTCATACAAAATAAAACTAATGCTGTTTTTCG
GTACAACTCAAACCTATCGAATTCGAATAAGTATCCATACACTGACAAAC
ACATACCAATCGTCTCAAAACAAATATAAGTTGATACGATAATCAGTGGA
ACGGCGAAAACTGGAGTTTTTAAACTATTCGTCCGCCTGAGATTCTTTTT
TGTCCGCTGCGAGTGCGCTTTACGATTCAACTTACGGAACTTTCGATACA
GGTAAGTGTACGTAAAAGCGGCATTAATTAAAACTGTAAAATCAGCGAAA
AGTGAGAAATAAAAGACATATTCGGTGGTCTTATCCAGCGTTAATTCTTC
GATCGTTAAAGTAGCTGTTATAAGAACAATTCCGGCGGTTATGCTGCCTA
CCCAATACACCAATAGTATACGGATTATCCGGCTTTTAGTGGCAATTACC
GTATACCGGAGATGATAATACACCTCCATGAAGCGATCCATTGTAATATG
ATGTAATGCCAGATAGAAGACTATCAAAGCTGAAAAACGTATAAATCGCT
CAAAAATGAGATAGCCCTGACTACTAGTCTCTTTTAAGAGGTCGTAAGTG
TTGATTCGTATTTGAGCTATGCAGAAGATGATTTCGCAGATAGAGATGTT
GGCGATCAGGATTCGTTGGTTTGTGAAGCGAGTAAGACGTCGACTTTGGT
AAAGTAATGCAAGACAATAACAATGGGCGCATGCGCAGATCGTGTTAAAA
ACGAGGCTGGATACTGATAAAATTCTGATCGTCAAATCCATTGTTCTGAA
ATCTTTTTTAGTGTTCTACTTTATTTAGTGTCCTACACTCAACATTTACA
ATTTCCG Run BLAST on NCBI protein sequence of TCONS_00061352-protein >TCONS_00061352-protein ID=TCONS_00061352-protein|Name=TCONS_00061352-protein|organism=Clytia hemisphaerica|type=polypeptide|length=506bp
MDLTIRILSVSSLVFNTICACAHCYCLALLYQSRRLTRFTNQRILIANIS
ICEIIFCIAQIRINTYDLLKETSSQGYLIFERFIRFSALIVFYLALHHIT
MDRFMEVYYHLRYTVIATKSRIIRILLVYWVGSITAGIVLITATLTIEEL
TLDKTTEYVFYFSLFADFTVLINAAFTYTYLYRKFRKLNRKAHSQRTKKN
LRRTNSLKTPVFAVPLIIVSTYICFETIGMCLSVYGYLFEFDRFELYRKT
ALVLFCMSYLSDAFAYIFIQPVIRDTIKTHYRTVKSKVIRSSAKSTTRSQ
TGIDNLACVSNANTIGRTANQIEVYLYQNVPTDHKISDQTKTQQCILDSN
NNKPREQEIERAPTDHAMHSTCNNTHSSIYPTLDAFSTGPQIVGINNLGS
STNSLENSSCVTCKSPYLNQTRIASTIQSSTSNCTTPAMGIKRSDKNENF
HVNKHQSISNLDDNHLCESRMALGDCTPKSDSILKIDVRENGQKHKMKLH
VDADFD Run BLAST on NCBI transcript from alignment at scaffold_356:95130..96836 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061352 ID=TCONS_00061352|Name=TCONS_00061352|organism=Clytia hemisphaerica|type=transcript|length=1707bp|location=Sequence derived from alignment at scaffold_356:95130..96836 (Clytia hemisphaerica)
CGGAAATTGTAAATGTTGAGTGTAGGACACTAAATAAAGTAGAACACTAA
AAAAGATTTCAGAACAATGGATTTGACGATCAGAATTTTATCAGTATCCA
GCCTCGTTTTTAACACGATCTGCGCATGCGCCCATTGTTATTGTCTTGCA
TTACTTTACCAAAGTCGACGTCTTACTCGCTTCACAAACCAACGAATCCT
GATCGCCAACATCTCTATCTGCGAAATCATCTTCTGCATAGCTCAAATAC
GAATCAACACTTACGACCTCTTAAAAGAGACTAGTAGTCAGGGCTATCTC
ATTTTTGAGCGATTTATACGTTTTTCAGCTTTGATAGTCTTCTATCTGGC
ATTACATCATATTACAATGGATCGCTTCATGGAGGTGTATTATCATCTCC
GGTATACGGTAATTGCCACTAAAAGCCGGATAATCCGTATACTATTGGTG
TATTGGGTAGGCAGCATAACCGCCGGAATTGTTCTTATAACAGCTACTTT
AACGATCGAAGAATTAACGCTGGATAAGACCACCGAATATGTCTTTTATT
TCTCACTTTTCGCTGATTTTACAGTTTTAATTAATGCCGCTTTTACGTAC
ACTTACCTGTATCGAAAGTTCCGTAAGTTGAATCGTAAAGCGCACTCGCA
GCGGACAAAAAAGAATCTCAGGCGGACGAATAGTTTAAAAACTCCAGTTT
TCGCCGTTCCACTGATTATCGTATCAACTTATATTTGTTTTGAGACGATT
GGTATGTGTTTGTCAGTGTATGGATACTTATTCGAATTCGATAGGTTTGA
GTTGTACCGAAAAACAGCATTAGTTTTATTTTGTATGAGCTATTTGTCTG
ATGCTTTCGCTTATATTTTTATACAACCGGTAATTCGCGATACCATTAAA
ACTCATTATCGTACGGTTAAATCGAAAGTCATTCGAAGCAGTGCGAAAAG
TACAACACGATCACAGACTGGGATTGATAATCTTGCCTGTGTTTCGAATG
CCAATACAATAGGAcgaacagccaatcaaattgaAGTATACCTATACCAA
AATGTGCCAACAGACCATAAAATCTCTGATCAAACGAAAACTCAGCAATG
TATACTAGATTCGAATAACAACAAACCTAGAGAACAAGAAATAGAAAGAG
CACCGACAGACCATGCTATGCATTCTACCTGTAACAACACACATTCAAGT
ATTTACCCTACTCTTGACGCATTCTCTACAGGACCTCAGATAGTTGGAAT
AAATAATCTTGGTTCAAGTACAAATAGTCTAGAAAATTCAAGTTGTGTTA
CTTGTAAATCACCCTATTTAAATCAAACGCGGATAGCATCAACGATTCAG
TCTTCCACATCAAATTGTACTACTCCAGCAATGGGCATCAAAAGaagtga
taaaaatgaaaacttccATGTAAACAAACACCAAAGCATTTCTAACCTAG
ATGATAACCACTTATGTGAGAGCAGAATGGCCTTAGGGGACTGTACCCCA
AAATCTGATAGTATTCTTAAAATCGATGTCAGGGAAAACGGACAAAAACA
CAAGATGAAGCTGCATGTTGATGCAGATTTTGATTAATCCTCGCATGACA
TATTCCCGACtcatgattttttatgacaacAAATGAATAAGTTTGTTAGA
AATTTTAAATCATTCGGTGGTACAAGTAATATTAATGAATATAAATcgtt
gttggaa Coding sequence (CDS) from alignment at scaffold_356:95130..96836 >TCONS_00061352 ID=TCONS_00061352|Name=TCONS_00061352|organism=Clytia hemisphaerica|type=CDS|length=1521bp|location=Sequence derived from alignment at scaffold_356:95130..96836 (Clytia hemisphaerica)
ATGGATTTGACGATCAGAATTTTATCAGTATCCAGCCTCGTTTTTAACAC
GATCTGCGCATGCGCCCATTGTTATTGTCTTGCATTACTTTACCAAAGTC
GACGTCTTACTCGCTTCACAAACCAACGAATCCTGATCGCCAACATCTCT
ATCTGCGAAATCATCTTCTGCATAGCTCAAATACGAATCAACACTTACGA
CCTCTTAAAAGAGACTAGTAGTCAGGGCTATCTCATTTTTGAGCGATTTA
TACGTTTTTCAGCTTTGATAGTCTTCTATCTGGCATTACATCATATTACA
ATGGATCGCTTCATGGAGGTGTATTATCATCTCCGGTATACGGTAATTGC
CACTAAAAGCCGGATAATCCGTATACTATTGGTGTATTGGGTAGGCAGCA
TAACCGCCGGAATTGTTCTTATAACAGCTACTTTAACGATCGAAGAATTA
ACGCTGGATAAGACCACCGAATATGTCTTTTATTTCTCACTTTTCGCTGA
TTTTACAGTTTTAATTAATGCCGCTTTTACGTACACTTACCTGTATCGAA
AGTTCCGTAAGTTGAATCGTAAAGCGCACTCGCAGCGGACAAAAAAGAAT
CTCAGGCGGACGAATAGTTTAAAAACTCCAGTTTTCGCCGTTCCACTGAT
TATCGTATCAACTTATATTTGTTTTGAGACGATTGGTATGTGTTTGTCAG
TGTATGGATACTTATTCGAATTCGATAGGTTTGAGTTGTACCGAAAAACA
GCATTAGTTTTATTTTGTATGAGCTATTTGTCTGATGCTTTCGCTTATAT
TTTTATACAACCGGTAATTCGCGATACCATTAAAACTCATTATCGTACGG
TTAAATCGAAAGTCATTCGAAGCAGTGCGAAAAGTACAACACGATCACAG
ACTGGGATTGATAATCTTGCCTGTGTTTCGAATGCCAATACAATAGGAcg
aacagccaatcaaattgaAGTATACCTATACCAAAATGTGCCAACAGACC
ATAAAATCTCTGATCAAACGAAAACTCAGCAATGTATACTAGATTCGAAT
AACAACAAACCTAGAGAACAAGAAATAGAAAGAGCACCGACAGACCATGC
TATGCATTCTACCTGTAACAACACACATTCAAGTATTTACCCTACTCTTG
ACGCATTCTCTACAGGACCTCAGATAGTTGGAATAAATAATCTTGGTTCA
AGTACAAATAGTCTAGAAAATTCAAGTTGTGTTACTTGTAAATCACCCTA
TTTAAATCAAACGCGGATAGCATCAACGATTCAGTCTTCCACATCAAATT
GTACTACTCCAGCAATGGGCATCAAAAGaagtgataaaaatgaaaacttc
cATGTAAACAAACACCAAAGCATTTCTAACCTAGATGATAACCACTTATG
TGAGAGCAGAATGGCCTTAGGGGACTGTACCCCAAAATCTGATAGTATTC
TTAAAATCGATGTCAGGGAAAACGGACAAAAACACAAGATGAAGCTGCAT
GTTGATGCAGATTTTGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061352-exon-scaffold_356-1491911889:95130..96836 | TCONS_00061352-exon-scaffold_356-1491911889:95130..96836 | Clytia hemisphaerica | exon |
| TCONS_00061352-exon-scaffold_356-1510915933:95130..96836 | TCONS_00061352-exon-scaffold_356-1510915933:95130..96836 | Clytia hemisphaerica | exon |
| TCONS_00061352-exon-scaffold_356-1575043694:95130..96836 | TCONS_00061352-exon-scaffold_356-1575043694:95130..96836 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_356 | supercontig | scaffold_356:95130..96836 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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