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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061336 ID=TCONS_00061336|Name=TCONS_00061336|organism=Clytia hemisphaerica|type=transcript|length=1161bp
CTGACCCCTACCATCAAAGATGCAGCGAAAGGTCTCTTCGAAAGTATGTG
TTACGCATACACAAAATCTGATTTTGAAAGGTTTGAAAAAGAATTCCAAA
CGCTAGAATCGTCAGCCCTGCTTGAATACTACGATAAAAATTGGAAACCT
ATTTCTAAAGAATGGGTAAAATGTTTTAAGGCAGAAGCTGGAGACTTTCT
TAACTCGACAAACAATCGGCTTGAAAGTTTCAATAGCAAACTGAAAACTG
TTGTTGACAACCATTGTAGTCTTGAGGAGTTCGTACGTGGGTTTTTCGTT
GTACTTGACGCCTTACGCACTGAAAGAGACGCAAATGTTGCAAAAGAGTT
CCAAAAGCTGAAGCTTTCGCTGCCTCACGATCCGTGTGTTAAAAGTATTT
ACGATCATTTAACTTCGTATTCTGCTAACTTTGTATGNCTACACACTGAA
AGAGATGCAAATGTTGCAAAAGAGTTCCAAAAGCTGAAGCTTTCGCTGCC
TCACGATCCGTGTGTTAAAAGTATTTACGATCATTTAACTTCGTATTCTG
CTAACTTTGTATGTGAGCAGCTAGCAGCAATCGAAAATACAACAGTACGT
AACAGTACAATTAACTCGTGCGACTGTTGTTTTTATCTTTCAATGGATCT
CCCATGCAGGCACATCTTTCTCTCGAGATCATTGTCAGGGTGTGTGCCTC
TTTTCGATCCCGTTCTTTGCGCCGTTCGATGGTCGAAAACTTATTATCGT
CAAAGCCAACGGCTGTTTACACAAACAATCAATAAATTTGACAAGTTAAC
GACCACTTCGTCTTCATTCCGCCCTCTAAAAGCCCTTAACTTTAACGAAA
GATATAGAAAGGCAGACGctgtatgcaaaaatatttcGATGTTGGCTTCA
GAGCCTGGAGGCACAGAATTTGTCGAGCGAATGACCCTTCTTAGAACACT
TGAAGACATGTGGCGAAATGGTCAAGAGGTTCATTTACTTTCGCTACCAT
TGAAATCAACGGAGAACGAAAATCCTTTTTCATCTTTCTCTCAAGATCAT
TGTCAGGGTGCGTGCGTGTggtattgttaaccggttactttttcgaagcg
ggctacatgactttttgcgcaatgcaattggttcttttcgcatgacgacg
ggcctacattg Run BLAST on NCBI transcript from alignment at scaffold_356:52970..54130+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061336 ID=TCONS_00061336|Name=TCONS_00061336|organism=Clytia hemisphaerica|type=transcript|length=1161bp|location=Sequence derived from alignment at scaffold_356:52970..54130+ (Clytia hemisphaerica)
CTGACCCCTACCATCAAAGATGCAGCGAAAGGTCTCTTCGAAAGTATGTG
TTACGCATACACAAAATCTGATTTTGAAAGGTTTGAAAAAGAATTCCAAA
CGCTAGAATCGTCAGCCCTGCTTGAATACTACGATAAAAATTGGAAACCT
ATTTCTAAAGAATGGGTAAAATGTTTTAAGGCAGAAGCTGGAGACTTTCT
TAACTCGACAAACAATCGGCTTGAAAGTTTCAATAGCAAACTGAAAACTG
TTGTTGACAACCATTGTAGTCTTGAGGAGTTCGTACGTGGGTTTTTCGTT
GTACTTGACGCCTTACGCACTGAAAGAGACGCAAATGTTGCAAAAGAGTT
CCAAAAGCTGAAGCTTTCGCTGCCTCACGATCCGTGTGTTAAAAGTATTT
ACGATCATTTAACTTCGTATTCTGCTAACTTTGTATGNCTACACACTGAA
AGAGATGCAAATGTTGCAAAAGAGTTCCAAAAGCTGAAGCTTTCGCTGCC
TCACGATCCGTGTGTTAAAAGTATTTACGATCATTTAACTTCGTATTCTG
CTAACTTTGTATGTGAGCAGCTAGCAGCAATCGAAAATACAACAGTACGT
AACAGTACAATTAACTCGTGCGACTGTTGTTTTTATCTTTCAATGGATCT
CCCATGCAGGCACATCTTTCTCTCGAGATCATTGTCAGGGTGTGTGCCTC
TTTTCGATCCCGTTCTTTGCGCCGTTCGATGGTCGAAAACTTATTATCGT
CAAAGCCAACGGCTGTTTACACAAACAATCAATAAATTTGACAAGTTAAC
GACCACTTCGTCTTCATTCCGCCCTCTAAAAGCCCTTAACTTTAACGAAA
GATATAGAAAGGCAGACGctgtatgcaaaaatatttcGATGTTGGCTTCA
GAGCCTGGAGGCACAGAATTTGTCGAGCGAATGACCCTTCTTAGAACACT
TGAAGACATGTGGCGAAATGGTCAAGAGGTTCATTTACTTTCGCTACCAT
TGAAATCAACGGAGAACGAAAATCCTTTTTCATCTTTCTCTCAAGATCAT
TGTCAGGGTGCGTGCGTGTggtattgttaaccggttactttttcgaagcg
ggctacatgactttttgcgcaatgcaattggttcttttcgcatgacgacg
ggcctacattg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061336-exon-scaffold_356-1491911889:52970..54130 | TCONS_00061336-exon-scaffold_356-1491911889:52970..54130 | Clytia hemisphaerica | exon |
| TCONS_00061336-exon-scaffold_356-1510915933:52970..54130 | TCONS_00061336-exon-scaffold_356-1510915933:52970..54130 | Clytia hemisphaerica | exon |
| TCONS_00061336-exon-scaffold_356-1575043694:52970..54130 | TCONS_00061336-exon-scaffold_356-1575043694:52970..54130 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_356 | supercontig | scaffold_356:52970..54130 + |
Blast
The following BLAST results are available for this feature:
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