TCONS_00061335 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061335
Unique NameTCONS_00061335
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1197

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061335 ID=TCONS_00061335|Name=TCONS_00061335|organism=Clytia hemisphaerica|type=transcript|length=1197bp
GGTTGAACGATACTGTAATTGATTCCTACATTAAGTACCTGCTCGAAAAT
ATTTCATCCACTGCCTACATAGAATCAGCTATTATGCACGAATTGATTAA
TGGAAGTAAACAATATGTTATGCCCCCTACAGTGCAGGACCTATTCTTAA
CCGACCAGTTGATTGGATTGTATAGTGTTGGAAAACATTGGCGCTTATTG
GTTGTATATCccaaaaaacaaattatttgGTTAATCGACCCTTTTGGAGA
ATCCAGCAATATCATGGAGGAAACCAAGCGAGCTTGGGAAGCAAGCATGT
TGAGAAGTTTCCCTTCAAACAAGAATAAAGCGTGGGATATCATCCAGGTC
GAGCATGCAAAACAATCTGACGCTATTTCATGTGGTGTCATTTGCATAAA
GTTTGCGGAGTGTGTTTTAAGGCACGAAAACCTTCCAAGTCATTTTCATT
CGGATGAATTGATGAACCACCGTCAAAAGATCGCTGTAAAATTGATTGAA
TTAGGAAGCAACGGTGACTGGTGCACAAAGATTTGCCGAATATGCGATCG
GTGCGATTCCCCTCCATTGTCAAAACAGACTGGAATAAAACCAAAGAAAT
GGCCATGGGTTTGTTGTGACATTTGCTCACCGGTAATGTGGTACCATGGT
CATTGCGTCGGGGtaacaaaaacacaaaatatgaaaaacatatCATTTTA
TTGCAATAAAACAATTATACAGGACGAAATTGTTTCTTTGCAAATCGGTG
AGACACTTATTCGCCAAAGAAAAAATCGCAGAATAAAAAGATGCTACGGA
TGCTCAGACGAGATTAGCGAGTCGCCCCTTGATCCGCCTCACGATATGGT
GCTCCTCCAATTAATGAGACGTCCCAAGCAAAAGTGCACCTGGGATTCCG
TTAAGGAAAAGGACTTTGCGATTTTTCGTTTGCATTATCATGCGAAAAAA
TATTGCATAAGAAATTTGTCGTTGGATAAAGTCAAACTGTCTCGTGATTT
CCAACTTACTGAGGTTCACCGTCATCAACTCAAATATTTGGGTATTTCAT
ATACATGATTGTATATGCTCTTGTGTGCCTAATTGTATGGGGGTCAAAAA
TTGCACCCCATAATCACTTAATTATGACACCCCCCATATTAtggtttttt
ctgaaaaagtgcaaaaccttcattttcctagggctctttaggaaaat
Run BLAST on NCBI

protein sequence of TCONS_00061335-protein

>TCONS_00061335-protein ID=TCONS_00061335-protein|Name=TCONS_00061335-protein|organism=Clytia hemisphaerica|type=polypeptide|length=351bp
LNDTVIDSYIKYLLENISSTAYIESAIMHELINGSKQYVMPPTVQDLFLT
DQLIGLYSVGKHWRLLVVYPKKQIIWLIDPFGESSNIMEETKRAWEASML
RSFPSNKNKAWDIIQVEHAKQSDAISCGVICIKFAECVLRHENLPSHFHS
DELMNHRQKIAVKLIELGSNGDWCTKICRICDRCDSPPLSKQTGIKPKKW
PWVCCDICSPVMWYHGHCVGVTKTQNMKNISFYCNKTIIQDEIVSLQIGE
TLIRQRKNRRIKRCYGCSDEISESPLDPPHDMVLLQLMRRPKQKCTWDSV
KEKDFAIFRLHYHAKKYCIRNLSLDKVKLSRDFQLTEVHRHQLKYLGISY
T
Run BLAST on NCBI

transcript from alignment at scaffold_356:4121..7958+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061335 ID=TCONS_00061335|Name=TCONS_00061335|organism=Clytia hemisphaerica|type=transcript|length=3838bp|location=Sequence derived from alignment at scaffold_356:4121..7958+ (Clytia hemisphaerica)
GGTTGAACGATACTGTAATTGATTCCTACATTAAGTACCTGCTCGAAAAT
GTAAgacattattattttttaattttgtttttttattttgaaattttatt
tttaataattatgtTCATCAACCGTATCTTTGCAGTGTTTCTGGAAAAAC
TTANgacattattattttttaattttctttttttattttcaaattttatt
tttaataattatgtTCATCGACCATATCTTTGCAGTGTTTCTGGAAAAAC
TTAATCCCCGCATGATCCCCGTAATggcaaatgatttttttgtttgttga
aaaaaaaaggagAATGTTATTTTCTTTTGGATAAATTCCACAGTATATCT
GCGATGCTATTTTAGATTTCATCCACTGCCTACATAGAATCAGCTATTAT
GCACGAATTGATTAATGGAAGTAAACAATATGTTATGCCCCCTACAGTGC
AGGTGATAATTGAATACATTATATTTACCATGAAAAAGACACTTTGTATC
CAATTTTCTCAACTTCTACGAATGTTAAAGAATGAACTCTATCTATCAAA
TTAAATAGGTGTATGATTGGATCAGACATaattctttttataaatattCG
TAAAACTTGAGAAGAATTGAGTTCGAAGGGTCAAATTTATTTNTAAAGAA
TGAACTCTATCTATCAAATTAAATAGGTGTATGATTGGATCAGACATaat
tctttttataaatattCGTAAAACTTGAGAAGAATTGAATTCGAAGGGTC
AAATTTATTCGTGGTGCACCCGGGGGTGCACCCGGtgtttcattctttca
tttgtTCGTTCGCTTTGAGATAAGGCTTTGGACATTTCTCTTTTTTGAAG
TCGTTTTCAAGCGATATGTTGTTTAATTTTGTACTTTCTTTATTTGatca
attttactatttttccaTTGTAGGACCTATTCTTAACCGACCAGTTGATT
GGATTGTATAGTGTTGGAAAACATTGGCGCTTATTGGTGAGACGCTTTTT
GGTAACTAACTCCTATCTTGGGAGATGAAACACTTGCATATTTCAACGCC
ACGAATTTCAGTACTTCTCGGTTATATAACGAAaaactttgacatttttc
aagaaataaGAGTAAGAAATATTACGGGTATTTCTTTCTTACGAGTCTTA
GACATCGATCAAAGTGCCTGAAAAAGGTCTTGCATGCGAAGCGTTaccaa
taaaattttgaaacttaatttcaattttttatttcaaaattatcaTAGGT
TGTATATCccaaaaaacaaattatttgGTTAATCGACCCTTTTGGAGAAT
CCAGCAATATCATGGAGGAAACCAAGCGAGCTTGGGAGTAAGTTGTATAT
TGTTTCTCCTTtaattgatttatttattttaatttttttgaagttcAATT
GTAACAGTAGCAACCAGGCTAATAAAGTTCAACTCTTTATTTACAATAAG
CAACTATTCAATGGGTTAACATTGGTTTTTGAGATTTATTAAACCGGGAT
GCCGCGATATTCTCTATTCTCAGTATTTCTCAACTGTAAAATATGTTCAT
TTGTAGTTGTAAACTAACTTTATCCGTCAGTTGGTAGATAGaggtttgaa
aatgtttttgtcaattacattcgacGGTCATCATTTCGACCTTTCAAGCG
ACCAAAAGGAAGGTTAGAGATGGAAAGAGTGAAAGTTCGAGATGACGAAG
GTTTTAAGAAAAGATAGTCGATCACGCAATGTATGGCTTAATACGAATTT
TAATACAACTTTTTAGAGCAAGCATGTTGAGAAGTTTCCCTTCAAACAAG
AATAAAGCGTGGGATATCATCCAGGTCGAGCATGCAAAACAATCTGACGC
TATTTCATGTGGTGTCATTTGCATAAAGGTGAAGGGAGATTTTCGTTTTG
TGGAAAAACCAATAACTCAAAAATTTCTCAAGGAATTATTTCCGCAAAAA
CGGCCAAAATTAACCCTTTAAGGTAATTTTGGCTGACCTGGATTTTGTGA
GCGTCAAATATTCATTTTGTGGGAATGAATTAGCCATTTTTTGGCCAATC
TCTTGTGTTTTCATAGGACTTTTTCAAGCGtgaatttttctttagattca
GTAATGCTGAAAATTATGTCTTACTAGAAATTCACTCTTATCTTCTAGTT
TGCGGAGTGTGTTTTAAGGCACGAAAACCTTCCAAGTCATTTTCATTCGG
ATGAATTGATGAACCACCGTCAAAAGATCGCTGTAAAATTGATTGAATTA
GGAAGTAAGTTTATCAGTATTATCAGACCGTTTATTAGTATTTTTACATT
GCTGACTTGTGAATGATAAATATTGTAATCAAATTGTTGGTCAAACAATA
TTTCTGTCAAGAGAATCGCCTTAATTAGATaagtatttaaatttttattt
gacttcTTTTTACGCAGGCAACGGTGACTGGTGCACAAAGATTTGCCGAA
TATGCGATCGGTGCGATTCCCCTCCATTGTCAAAACAGACTGGAATAAAA
CCAAAGAAATGGCCATGGGTAATTATCGTGTTAATTAGCTAAAACAATTC
TCTATTTACTGTGATGAACTTTAAGAACTAAAACTTAATATAATTTGATG
GTTATATGAAAATGGAAGATTTTCTGCATTGAAACAGTTGAAAGTGTTCT
ATTAAAATGAGAAGAGGTTCTTGTCAAATGCTTTCGTATTGTACTTTCTA
TTGTGCTTTGTATTGTGTTCGTATCGTTTCTTTGTAGGTTTGTTGTGACA
TTTGCTCACCGGTAATGTGGTACCATGGTCATTGCGTCGGGGtaacaaaa
acacaaaatatgaaaaacatatCATTTTATTGCAATAAAGtaagtttaaa
ataaaaaatccgacaattttgaaaattgccaatataaaacataaattttt
tcgTCGCTGAAAttgatttgtaatttttaattttttcatgtaGTAAAAGC
AAAGTTTACCTTATTTTTTGCCAAGTTATTTTAGAACTGGCTTACTCGCT
AAATGAAATCTCCACCAAAAACGCACTTCCGTTATTCGCCAAATATAATA
cacgcaaaaattaattttcttataagctATCGATCGAATTCACCAATTTT
GCCCGAACTTCTCTTTAGGAAATTTTGTTCTGTAGAAGATTCTTCTTTCT
AACCATCTTCAAGAATATATCTGATTGGAAAAGACTCTTCCTACtgtgaa
aaaattgtaaatgcacggttaaatttaattttggtaattttggttCAAAA
ATAGGATTCATTATCTCCAATTTCACACGATAGGTCAGCTAAAAAAATGC
AGTACAAACTTGCAGTACACTAATAATTTTTACAATGTTTTCGTATTTCA
GACAATTATACAGGACGAAATTGTTTCTTTGCAAATCGGTGAGACACTTA
TTCGCCAAAGAAAAAATCGCAGAATAAAAAGATGCTACGGATGCTCAGAC
GAGATTAGCGAGTCGCCCCTTGATCCGCCTCACGATATGGTGCTCCTCCA
ATTAATGAGACGTCCCAAGCAAAAGTGCACCTGGGATTCCGTTAAGGAAA
AGGACTTTGCGATTTTTCGTTTGCATTATCATGCGAAAAAATATTGCATA
AGAAATTTGTCGTTGGATAAAGTCAAACTGTCTCGTGATTTCCAACTTAC
TGAGGTTCACCGTCATCAACTCAAATATTTGGGTATTTCATATACATGAT
TGTATATGCTCTTGTGTGCCTAATTGTATGGGGGTCAAAAATTGCACCCC
ATAATCACTTAATTATGACACCCCCCATATTAtggttttttctgaaaaag
tgcaaaaccttcattttcctagggctctttaggaaaat

Coding sequence (CDS) from alignment at scaffold_356:4121..7958+

>TCONS_00061335 ID=TCONS_00061335|Name=TCONS_00061335|organism=Clytia hemisphaerica|type=CDS|length=9504bp|location=Sequence derived from alignment at scaffold_356:4121..7958+ (Clytia hemisphaerica)
TTGAACGATACTGTAATTGATTCCTACATTAAGTACCTGCTCGAAAATAT
TTCATCCACTGCCTACATAGAATCAGCTATTATGCACGAATTGATTAATG
GAAGTAAACAATATGTTATGCCCCCTACAGTGCAGGACCTATTCTTAACC
GACCAGTTGATTGGATTGTATAGTGTTGGAAAACATTGGCGCTTATTGGT
TGTATATCccaaaaaacaaattatttgGTTAATCGACCCTTTTGGAGAAT
CCAGCAATATCATGGAGGAAACCAAGCGAGCTTGGGAAGCAAGCATGTTG
AGAAGTTTCCCTTCAAACAAGAATAAAGCGTGGGATATCATCCAGGTCGA
GCATGCAAAACAATCTGACGCTATTTCATGTGGTGTCATTTGCATAAAGT
TTGCGGAGTGTGTTTTAAGGCACGAAAACCTTCCAAGTCATTTTCATTCG
GATGAATTGATGAACCACCGTCAAAAGATCGCTGTAAAATTGATTGAATT
AGGAAGCAACGGTGACTGGTGCACAAAGATTTGCCGAATATGCGATCGGT
GCGATTCCCCTCCATTGTCAAAACAGACTGGAATAAAACCAAAGAAATGG
CCATGGGTTTGTTGTGACATTTGCTCACCGGTAATGTGGTACCATGGTCA
TTGCGTCGGGGtaacaaaaacacaaaatatgaaaaacatatCATTTTATT
GCAATAAAACAATTATACAGGACGAAATTGTTTCTTTGCAAATCGGTGAG
ACACTTATTCGCCAAAGAAAAAATCGCAGAATAAAAAGATGCTACGGATG
CTCAGACGAGATTAGCGAGTCGCCCCTTGATCCGCCTCACGATATGGTGC
TCCTCCAATTAATGAGACGTCCCAAGCAAAAGTGCACCTGGGATTCCGTT
AAGGAAAAGGACTTTGCGATTTTTCGTTTGCATTATCATGCGAAAAAATA
TTGCATAAGAAATTTGTCGTTGGATAAAGTCAAACTGTCTCGTGATTTCC
AACTTACTGAGGTTCACCGTCATCAACTCAAATATTTGGGTATTTCATAT
ACATGATTGAACGATACTGTAATTGATTCCTACATTAAGTACCTGCTCGA
AAATATTTCATCCACTGCCTACATAGAATCAGCTATTATGCACGAATTGA
TTAATGGAAGTAAACAATATGTTATGCCCCCTACAGTGCAGGACCTATTC
TTAACCGACCAGTTGATTGGATTGTATAGTGTTGGAAAACATTGGCGCTT
ATTGGTTGTATATCccaaaaaacaaattatttgGTTAATCGACCCTTTTG
GAGAATCCAGCAATATCATGGAGGAAACCAAGCGAGCTTGGGAAGCAAGC
ATGTTGAGAAGTTTCCCTTCAAACAAGAATAAAGCGTGGGATATCATCCA
GGTCGAGCATGCAAAACAATCTGACGCTATTTCATGTGGTGTCATTTGCA
TAAAGTTTGCGGAGTGTGTTTTAAGGCACGAAAACCTTCCAAGTCATTTT
CATTCGGATGAATTGATGAACCACCGTCAAAAGATCGCTGTAAAATTGAT
TGAATTAGGAAGCAACGGTGACTGGTGCACAAAGATTTGCCGAATATGCG
ATCGGTGCGATTCCCCTCCATTGTCAAAACAGACTGGAATAAAACCAAAG
AAATGGCCATGGGTTTGTTGTGACATTTGCTCACCGGTAATGTGGTACCA
TGGTCATTGCGTCGGGGtaacaaaaacacaaaatatgaaaaacatatCAT
TTTATTGCAATAAAACAATTATACAGGACGAAATTGTTTCTTTGCAAATC
GGTGAGACACTTATTCGCCAAAGAAAAAATCGCAGAATAAAAAGATGCTA
CGGATGCTCAGACGAGATTAGCGAGTCGCCCCTTGATCCGCCTCACGATA
TGGTGCTCCTCCAATTAATGAGACGTCCCAAGCAAAAGTGCACCTGGGAT
TCCGTTAAGGAAAAGGACTTTGCGATTTTTCGTTTGCATTATCATGCGAA
AAAATATTGCATAAGAAATTTGTCGTTGGATAAAGTCAAACTGTCTCGTG
ATTTCCAACTTACTGAGGTTCACCGTCATCAACTCAAATATTTGGGTATT
TCATATACATGATTGAACGATACTGTAATTGATTCCTACATTAAGTACCT
GCTCGAAAATATTTCATCCACTGCCTACATAGAATCAGCTATTATGCACG
AATTGATTAATGGAAGTAAACAATATGTTATGCCCCCTACAGTGCAGGAC
CTATTCTTAACCGACCAGTTGATTGGATTGTATAGTGTTGGAAAACATTG
GCGCTTATTGGTTGTATATCccaaaaaacaaattatttgGTTAATCGACC
CTTTTGGAGAATCCAGCAATATCATGGAGGAAACCAAGCGAGCTTGGGAA
GCAAGCATGTTGAGAAGTTTCCCTTCAAACAAGAATAAAGCGTGGGATAT
CATCCAGGTCGAGCATGCAAAACAATCTGACGCTATTTCATGTGGTGTCA
TTTGCATAAAGTTTGCGGAGTGTGTTTTAAGGCACGAAAACCTTCCAAGT
CATTTTCATTCGGATGAATTGATGAACCACCGTCAAAAGATCGCTGTAAA
ATTGATTGAATTAGGAAGCAACGGTGACTGGTGCACAAAGATTTGCCGAA
TATGCGATCGGTGCGATTCCCCTCCATTGTCAAAACAGACTGGAATAAAA
CCAAAGAAATGGCCATGGGTTTGTTGTGACATTTGCTCACCGGTAATGTG
GTACCATGGTCATTGCGTCGGGGtaacaaaaacacaaaatatgaaaaaca
tatCATTTTATTGCAATAAAACAATTATACAGGACGAAATTGTTTCTTTG
CAAATCGGTGAGACACTTATTCGCCAAAGAAAAAATCGCAGAATAAAAAG
ATGCTACGGATGCTCAGACGAGATTAGCGAGTCGCCCCTTGATCCGCCTC
ACGATATGGTGCTCCTCCAATTAATGAGACGTCCCAAGCAAAAGTGCACC
TGGGATTCCGTTAAGGAAAAGGACTTTGCGATTTTTCGTTTGCATTATCA
TGCGAAAAAATATTGCATAAGAAATTTGTCGTTGGATAAAGTCAAACTGT
CTCGTGATTTCCAACTTACTGAGGTTCACCGTCATCAACTCAAATATTTG
GGTATTTCATATACATGATTGAACGATACTGTAATTGATTCCTACATTAA
GTACCTGCTCGAAAATATTTCATCCACTGCCTACATAGAATCAGCTATTA
TGCACGAATTGATTAATGGAAGTAAACAATATGTTATGCCCCCTACAGTG
CAGGACCTATTCTTAACCGACCAGTTGATTGGATTGTATAGTGTTGGAAA
ACATTGGCGCTTATTGGTTGTATATCccaaaaaacaaattatttgGTTAA
TCGACCCTTTTGGAGAATCCAGCAATATCATGGAGGAAACCAAGCGAGCT
TGGGAAGCAAGCATGTTGAGAAGTTTCCCTTCAAACAAGAATAAAGCGTG
GGATATCATCCAGGTCGAGCATGCAAAACAATCTGACGCTATTTCATGTG
GTGTCATTTGCATAAAGTTTGCGGAGTGTGTTTTAAGGCACGAAAACCTT
CCAAGTCATTTTCATTCGGATGAATTGATGAACCACCGTCAAAAGATCGC
TGTAAAATTGATTGAATTAGGAAGCAACGGTGACTGGTGCACAAAGATTT
GCCGAATATGCGATCGGTGCGATTCCCCTCCATTGTCAAAACAGACTGGA
ATAAAACCAAAGAAATGGCCATGGGTTTGTTGTGACATTTGCTCACCGGT
AATGTGGTACCATGGTCATTGCGTCGGGGtaacaaaaacacaaaatatga
aaaacatatCATTTTATTGCAATAAAACAATTATACAGGACGAAATTGTT
TCTTTGCAAATCGGTGAGACACTTATTCGCCAAAGAAAAAATCGCAGAAT
AAAAAGATGCTACGGATGCTCAGACGAGATTAGCGAGTCGCCCCTTGATC
CGCCTCACGATATGGTGCTCCTCCAATTAATGAGACGTCCCAAGCAAAAG
TGCACCTGGGATTCCGTTAAGGAAAAGGACTTTGCGATTTTTCGTTTGCA
TTATCATGCGAAAAAATATTGCATAAGAAATTTGTCGTTGGATAAAGTCA
AACTGTCTCGTGATTTCCAACTTACTGAGGTTCACCGTCATCAACTCAAA
TATTTGGGTATTTCATATACATGATTGAACGATACTGTAATTGATTCCTA
CATTAAGTACCTGCTCGAAAATATTTCATCCACTGCCTACATAGAATCAG
CTATTATGCACGAATTGATTAATGGAAGTAAACAATATGTTATGCCCCCT
ACAGTGCAGGACCTATTCTTAACCGACCAGTTGATTGGATTGTATAGTGT
TGGAAAACATTGGCGCTTATTGGTTGTATATCccaaaaaacaaattattt
gGTTAATCGACCCTTTTGGAGAATCCAGCAATATCATGGAGGAAACCAAG
CGAGCTTGGGAAGCAAGCATGTTGAGAAGTTTCCCTTCAAACAAGAATAA
AGCGTGGGATATCATCCAGGTCGAGCATGCAAAACAATCTGACGCTATTT
CATGTGGTGTCATTTGCATAAAGTTTGCGGAGTGTGTTTTAAGGCACGAA
AACCTTCCAAGTCATTTTCATTCGGATGAATTGATGAACCACCGTCAAAA
GATCGCTGTAAAATTGATTGAATTAGGAAGCAACGGTGACTGGTGCACAA
AGATTTGCCGAATATGCGATCGGTGCGATTCCCCTCCATTGTCAAAACAG
ACTGGAATAAAACCAAAGAAATGGCCATGGGTTTGTTGTGACATTTGCTC
ACCGGTAATGTGGTACCATGGTCATTGCGTCGGGGtaacaaaaacacaaa
atatgaaaaacatatCATTTTATTGCAATAAAACAATTATACAGGACGAA
ATTGTTTCTTTGCAAATCGGTGAGACACTTATTCGCCAAAGAAAAAATCG
CAGAATAAAAAGATGCTACGGATGCTCAGACGAGATTAGCGAGTCGCCCC
TTGATCCGCCTCACGATATGGTGCTCCTCCAATTAATGAGACGTCCCAAG
CAAAAGTGCACCTGGGATTCCGTTAAGGAAAAGGACTTTGCGATTTTTCG
TTTGCATTATCATGCGAAAAAATATTGCATAAGAAATTTGTCGTTGGATA
AAGTCAAACTGTCTCGTGATTTCCAACTTACTGAGGTTCACCGTCATCAA
CTCAAATATTTGGGTATTTCATATACATGATTGAACGATACTGTAATTGA
TTCCTACATTAAGTACCTGCTCGAAAATATTTCATCCACTGCCTACATAG
AATCAGCTATTATGCACGAATTGATTAATGGAAGTAAACAATATGTTATG
CCCCCTACAGTGCAGGACCTATTCTTAACCGACCAGTTGATTGGATTGTA
TAGTGTTGGAAAACATTGGCGCTTATTGGTTGTATATCccaaaaaacaaa
ttatttgGTTAATCGACCCTTTTGGAGAATCCAGCAATATCATGGAGGAA
ACCAAGCGAGCTTGGGAAGCAAGCATGTTGAGAAGTTTCCCTTCAAACAA
GAATAAAGCGTGGGATATCATCCAGGTCGAGCATGCAAAACAATCTGACG
CTATTTCATGTGGTGTCATTTGCATAAAGTTTGCGGAGTGTGTTTTAAGG
CACGAAAACCTTCCAAGTCATTTTCATTCGGATGAATTGATGAACCACCG
TCAAAAGATCGCTGTAAAATTGATTGAATTAGGAAGCAACGGTGACTGGT
GCACAAAGATTTGCCGAATATGCGATCGGTGCGATTCCCCTCCATTGTCA
AAACAGACTGGAATAAAACCAAAGAAATGGCCATGGGTTTGTTGTGACAT
TTGCTCACCGGTAATGTGGTACCATGGTCATTGCGTCGGGGtaacaaaaa
cacaaaatatgaaaaacatatCATTTTATTGCAATAAAACAATTATACAG
GACGAAATTGTTTCTTTGCAAATCGGTGAGACACTTATTCGCCAAAGAAA
AAATCGCAGAATAAAAAGATGCTACGGATGCTCAGACGAGATTAGCGAGT
CGCCCCTTGATCCGCCTCACGATATGGTGCTCCTCCAATTAATGAGACGT
CCCAAGCAAAAGTGCACCTGGGATTCCGTTAAGGAAAAGGACTTTGCGAT
TTTTCGTTTGCATTATCATGCGAAAAAATATTGCATAAGAAATTTGTCGT
TGGATAAAGTCAAACTGTCTCGTGATTTCCAACTTACTGAGGTTCACCGT
CATCAACTCAAATATTTGGGTATTTCATATACATGATTGAACGATACTGT
AATTGATTCCTACATTAAGTACCTGCTCGAAAATATTTCATCCACTGCCT
ACATAGAATCAGCTATTATGCACGAATTGATTAATGGAAGTAAACAATAT
GTTATGCCCCCTACAGTGCAGGACCTATTCTTAACCGACCAGTTGATTGG
ATTGTATAGTGTTGGAAAACATTGGCGCTTATTGGTTGTATATCccaaaa
aacaaattatttgGTTAATCGACCCTTTTGGAGAATCCAGCAATATCATG
GAGGAAACCAAGCGAGCTTGGGAAGCAAGCATGTTGAGAAGTTTCCCTTC
AAACAAGAATAAAGCGTGGGATATCATCCAGGTCGAGCATGCAAAACAAT
CTGACGCTATTTCATGTGGTGTCATTTGCATAAAGTTTGCGGAGTGTGTT
TTAAGGCACGAAAACCTTCCAAGTCATTTTCATTCGGATGAATTGATGAA
CCACCGTCAAAAGATCGCTGTAAAATTGATTGAATTAGGAAGCAACGGTG
ACTGGTGCACAAAGATTTGCCGAATATGCGATCGGTGCGATTCCCCTCCA
TTGTCAAAACAGACTGGAATAAAACCAAAGAAATGGCCATGGGTTTGTTG
TGACATTTGCTCACCGGTAATGTGGTACCATGGTCATTGCGTCGGGGtaa
caaaaacacaaaatatgaaaaacatatCATTTTATTGCAATAAAACAATT
ATACAGGACGAAATTGTTTCTTTGCAAATCGGTGAGACACTTATTCGCCA
AAGAAAAAATCGCAGAATAAAAAGATGCTACGGATGCTCAGACGAGATTA
GCGAGTCGCCCCTTGATCCGCCTCACGATATGGTGCTCCTCCAATTAATG
AGACGTCCCAAGCAAAAGTGCACCTGGGATTCCGTTAAGGAAAAGGACTT
TGCGATTTTTCGTTTGCATTATCATGCGAAAAAATATTGCATAAGAAATT
TGTCGTTGGATAAAGTCAAACTGTCTCGTGATTTCCAACTTACTGAGGTT
CACCGTCATCAACTCAAATATTTGGGTATTTCATATACATGATTGAACGA
TACTGTAATTGATTCCTACATTAAGTACCTGCTCGAAAATATTTCATCCA
CTGCCTACATAGAATCAGCTATTATGCACGAATTGATTAATGGAAGTAAA
CAATATGTTATGCCCCCTACAGTGCAGGACCTATTCTTAACCGACCAGTT
GATTGGATTGTATAGTGTTGGAAAACATTGGCGCTTATTGGTTGTATATC
ccaaaaaacaaattatttgGTTAATCGACCCTTTTGGAGAATCCAGCAAT
ATCATGGAGGAAACCAAGCGAGCTTGGGAAGCAAGCATGTTGAGAAGTTT
CCCTTCAAACAAGAATAAAGCGTGGGATATCATCCAGGTCGAGCATGCAA
AACAATCTGACGCTATTTCATGTGGTGTCATTTGCATAAAGTTTGCGGAG
TGTGTTTTAAGGCACGAAAACCTTCCAAGTCATTTTCATTCGGATGAATT
GATGAACCACCGTCAAAAGATCGCTGTAAAATTGATTGAATTAGGAAGCA
ACGGTGACTGGTGCACAAAGATTTGCCGAATATGCGATCGGTGCGATTCC
CCTCCATTGTCAAAACAGACTGGAATAAAACCAAAGAAATGGCCATGGGT
TTGTTGTGACATTTGCTCACCGGTAATGTGGTACCATGGTCATTGCGTCG
GGGtaacaaaaacacaaaatatgaaaaacatatCATTTTATTGCAATAAA
ACAATTATACAGGACGAAATTGTTTCTTTGCAAATCGGTGAGACACTTAT
TCGCCAAAGAAAAAATCGCAGAATAAAAAGATGCTACGGATGCTCAGACG
AGATTAGCGAGTCGCCCCTTGATCCGCCTCACGATATGGTGCTCCTCCAA
TTAATGAGACGTCCCAAGCAAAAGTGCACCTGGGATTCCGTTAAGGAAAA
GGACTTTGCGATTTTTCGTTTGCATTATCATGCGAAAAAATATTGCATAA
GAAATTTGTCGTTGGATAAAGTCAAACTGTCTCGTGATTTCCAACTTACT
GAGGTTCACCGTCATCAACTCAAATATTTGGGTATTTCATATACATGATT
GAACGATACTGTAATTGATTCCTACATTAAGTACCTGCTCGAAAATATTT
CATCCACTGCCTACATAGAATCAGCTATTATGCACGAATTGATTAATGGA
AGTAAACAATATGTTATGCCCCCTACAGTGCAGGACCTATTCTTAACCGA
CCAGTTGATTGGATTGTATAGTGTTGGAAAACATTGGCGCTTATTGGTTG
TATATCccaaaaaacaaattatttgGTTAATCGACCCTTTTGGAGAATCC
AGCAATATCATGGAGGAAACCAAGCGAGCTTGGGAAGCAAGCATGTTGAG
AAGTTTCCCTTCAAACAAGAATAAAGCGTGGGATATCATCCAGGTCGAGC
ATGCAAAACAATCTGACGCTATTTCATGTGGTGTCATTTGCATAAAGTTT
GCGGAGTGTGTTTTAAGGCACGAAAACCTTCCAAGTCATTTTCATTCGGA
TGAATTGATGAACCACCGTCAAAAGATCGCTGTAAAATTGATTGAATTAG
GAAGCAACGGTGACTGGTGCACAAAGATTTGCCGAATATGCGATCGGTGC
GATTCCCCTCCATTGTCAAAACAGACTGGAATAAAACCAAAGAAATGGCC
ATGGGTTTGTTGTGACATTTGCTCACCGGTAATGTGGTACCATGGTCATT
GCGTCGGGGtaacaaaaacacaaaatatgaaaaacatatCATTTTATTGC
AATAAAACAATTATACAGGACGAAATTGTTTCTTTGCAAATCGGTGAGAC
ACTTATTCGCCAAAGAAAAAATCGCAGAATAAAAAGATGCTACGGATGCT
CAGACGAGATTAGCGAGTCGCCCCTTGATCCGCCTCACGATATGGTGCTC
CTCCAATTAATGAGACGTCCCAAGCAAAAGTGCACCTGGGATTCCGTTAA
GGAAAAGGACTTTGCGATTTTTCGTTTGCATTATCATGCGAAAAAATATT
GCATAAGAAATTTGTCGTTGGATAAAGTCAAACTGTCTCGTGATTTCCAA
CTTACTGAGGTTCACCGTCATCAACTCAAATATTTGGGTATTTCATATAC
ATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038484XLOC_038484Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061335-exon-scaffold_356-1491911889:4121..4170TCONS_00061335-exon-scaffold_356-1491911889:4121..4170Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1510915933:4121..4170TCONS_00061335-exon-scaffold_356-1510915933:4121..4170Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1575043694:4121..4170TCONS_00061335-exon-scaffold_356-1575043694:4121..4170Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1491911889:4486..4572TCONS_00061335-exon-scaffold_356-1491911889:4486..4572Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1510915933:4486..4572TCONS_00061335-exon-scaffold_356-1510915933:4486..4572Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1575043694:4486..4572TCONS_00061335-exon-scaffold_356-1575043694:4486..4572Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1491911889:5044..5106TCONS_00061335-exon-scaffold_356-1491911889:5044..5106Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1510915933:5044..5106TCONS_00061335-exon-scaffold_356-1510915933:5044..5106Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1575043694:5044..5106TCONS_00061335-exon-scaffold_356-1575043694:5044..5106Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1491911889:5369..5457TCONS_00061335-exon-scaffold_356-1491911889:5369..5457Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1510915933:5369..5457TCONS_00061335-exon-scaffold_356-1510915933:5369..5457Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1575043694:5369..5457TCONS_00061335-exon-scaffold_356-1575043694:5369..5457Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1491911889:5887..5998TCONS_00061335-exon-scaffold_356-1491911889:5887..5998Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1510915933:5887..5998TCONS_00061335-exon-scaffold_356-1510915933:5887..5998Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1575043694:5887..5998TCONS_00061335-exon-scaffold_356-1575043694:5887..5998Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1491911889:6269..6374TCONS_00061335-exon-scaffold_356-1491911889:6269..6374Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1510915933:6269..6374TCONS_00061335-exon-scaffold_356-1510915933:6269..6374Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1575043694:6269..6374TCONS_00061335-exon-scaffold_356-1575043694:6269..6374Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1491911889:6538..6638TCONS_00061335-exon-scaffold_356-1491911889:6538..6638Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1510915933:6538..6638TCONS_00061335-exon-scaffold_356-1510915933:6538..6638Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1575043694:6538..6638TCONS_00061335-exon-scaffold_356-1575043694:6538..6638Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1491911889:6858..6959TCONS_00061335-exon-scaffold_356-1491911889:6858..6959Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1510915933:6858..6959TCONS_00061335-exon-scaffold_356-1510915933:6858..6959Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1575043694:6858..6959TCONS_00061335-exon-scaffold_356-1575043694:6858..6959Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1491911889:7472..7958TCONS_00061335-exon-scaffold_356-1491911889:7472..7958Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1510915933:7472..7958TCONS_00061335-exon-scaffold_356-1510915933:7472..7958Clytia hemisphaericaexon
TCONS_00061335-exon-scaffold_356-1575043694:7472..7958TCONS_00061335-exon-scaffold_356-1575043694:7472..7958Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061335-proteinTCONS_00061335-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_356supercontigscaffold_356:4121..7958 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.215452	0.227444	0.189147	0.0795542	6.51343	5.43585	8.53689	10.2878	10.0833	11.653	11.2935	13.2715	5.87658	8.52288	0.828076	1.2571	0.636861	1.05154	0.22903	0.229239	0.381904	0.758705	0.329377	0.411746	10.467	10.031	0.147714	0.428376	0.263677	0.446674
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003653Peptidase_C48_C
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061335 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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