TCONS_00061317 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061317
Unique NameTCONS_00061317
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061317 ID=TCONS_00061317|Name=TCONS_00061317|organism=Clytia hemisphaerica|type=transcript|length=151bp
NNAACAATCAAgaagtgaaaatcaaattcatcgACGAACGTGACCTCCCC
TCGTGCGTGGGAGTGTGATATTTTTATTGTATTATATTGTTTTGGGTCAT
CGAGACTAATCGAGGCCTATTTAgtgcttttgttaattttgtttatgACA
G
Run BLAST on NCBI

transcript from alignment at scaffold_355:23733..23883

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061317 ID=TCONS_00061317|Name=TCONS_00061317|organism=Clytia hemisphaerica|type=transcript|length=151bp|location=Sequence derived from alignment at scaffold_355:23733..23883 (Clytia hemisphaerica)
CTGTcataaacaaaattaacaaaagcacTAAATAGGCCTCGATTAGTCTC
GATGACCCAAAACAATATAATACAATAAAAATATCACACTCCCACGCACG
AGGGGAGGTCACGTTCGTcgatgaatttgattttcacttcTTGATTGTTN
N
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038468XLOC_038468Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061317-exon-scaffold_355-1491911889:23733..23883TCONS_00061317-exon-scaffold_355-1491911889:23733..23883Clytia hemisphaericaexon
TCONS_00061317-exon-scaffold_355-1510915933:23733..23883TCONS_00061317-exon-scaffold_355-1510915933:23733..23883Clytia hemisphaericaexon
TCONS_00061317-exon-scaffold_355-1575043694:23733..23883TCONS_00061317-exon-scaffold_355-1575043694:23733..23883Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_355supercontigscaffold_355:23733..23883 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061317 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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