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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061302 ID=TCONS_00061302|Name=TCONS_00061302|organism=Clytia hemisphaerica|type=transcript|length=2653bpRun BLAST on NCBI protein sequence of TCONS_00061302-protein >TCONS_00061302-protein ID=TCONS_00061302-protein|Name=TCONS_00061302-protein|organism=Clytia hemisphaerica|type=polypeptide|length=474bp MRNKMFAGEKINITENRAVLHVALRNRSNKPILVDGNDVMGDVNAVLAQMRun BLAST on NCBI transcript from alignment at scaffold_355:286813..328544- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00061302 ID=TCONS_00061302|Name=TCONS_00061302|organism=Clytia hemisphaerica|type=transcript|length=41732bp|location=Sequence derived from alignment at scaffold_355:286813..328544- (Clytia hemisphaerica) Coding sequence (CDS) from alignment at scaffold_355:286813..328544- >TCONS_00061302 ID=TCONS_00061302|Name=TCONS_00061302|organism=Clytia hemisphaerica|type=CDS|length=25650bp|location=Sequence derived from alignment at scaffold_355:286813..328544- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Annotated Terms
The following terms have been associated with this transcript:
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Blast
BLAST of TCONS_00061302 vs. Swiss-Prot (Human)
Match: G6PI (Glucose-6-phosphate isomerase OS=Homo sapiens GN=GPI PE=1 SV=4) HSP 1 Score: 739.184 bits (1907), Expect = 0.000e+0 Identity = 342/483 (70.81%), Postives = 404/483 (83.64%), Query Frame = 2
Query: 371 ARAGDVEEMRNKMFAGEKINITENRAVLHVALRNRSNKPILVDGNDVMGDVNAVLAQMRSFTQDVRSGTWKGYSGEVITDIVNIGIGGSDLGPLMVTEALKPFVDG-PKAHFVSNIDGTHMAETLKKLKPESTLFIVASKTFTTVETITNAKSARSWLLKAAKSDDAVAKHFVALSTNKDKVSEFGIDTKNMFAFWDWVGGRYSLWSAIGMSIALSVGMDDFEQLLSGAHFMDNHFQTAPMEENLPVIMAVLGVWYNNFFGSQTHALLPYDQYMHRFSAYFQQGDMESNGKSVRRDGKFVDYSTGPVIWGEPGTNGQHAFYQLIHQGQKLIPCDFLMPVETQNPISNGAHHQILAANFLAQTEALMKGKTEEEARSELEKSGMDAEKIAALVPHKQFTGNRPTNSIVFQKLSPFTLGLLIALYEHKIFVQGVIWNINSYDQWGVELGKQLANVIVKELDSNDAVTSHDSSTNGLINHFKTHRK 1816
A++ VE R +MF GEKIN TE RAVLHVALRNRSN PILVDG DVM +VN VL +M+SF Q VRSG WKGY+G+ ITD++NIGIGGSDLGPLMVTEALKP+ G P+ +VSNIDGTH+A+TL +L PES+LFI+ASKTFTT ETITNA++A+ W L+AAK AVAKHFVALSTN KV EFGID +NMF FWDWVGGRYSLWSAIG+SIAL VG D+FEQLLSGAH+MD HF+T P+E+N PV++A+LG+WY N FG +THA+LPYDQY+HRF+AYFQQGDMESNGK + + G VD+ TGP++WGEPGTNGQHAFYQLIHQG K+IPCDFL+PV+TQ+PI G HH+IL ANFLAQTEALM+GK+ EEAR EL+ +G E + L+PHK F GNRPTNSIVF KL+PF LG L+A+YEHKIFVQG+IW+INS+DQWGVELGKQLA I ELD + VTSHD+STNGLIN K R+
Sbjct: 72 AKSRGVEAARERMFNGEKINYTEGRAVLHVALRNRSNTPILVDGKDVMPEVNKVLDKMKSFCQRVRSGDWKGYTGKTITDVINIGIGGSDLGPLMVTEALKPYSSGGPRVWYVSNIDGTHIAKTLAQLNPESSLFIIASKTFTTQETITNAETAKEWFLQAAKDPSAVAKHFVALSTNTTKVKEFGIDPQNMFEFWDWVGGRYSLWSAIGLSIALHVGFDNFEQLLSGAHWMDQHFRTTPLEKNAPVLLALLGIWYINCFGCETHAMLPYDQYLHRFAAYFQQGDMESNGKYITKSGTRVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHKILLANFLAQTEALMRGKSTEEARKELQAAGKSPEDLERLLPHKVFEGNRPTNSIVFTKLTPFMLGALVAMYEHKIFVQGIIWDINSFDQWGVELGKQLAKKIEPELDGSAQVTSHDASTNGLINFIKQQRE 554 The following BLAST results are available for this feature:
BLAST of TCONS_00061302 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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