TCONS_00061300 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061300
Unique NameTCONS_00061300
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1368

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061300 ID=TCONS_00061300|Name=TCONS_00061300|organism=Clytia hemisphaerica|type=transcript|length=1368bp
tctagtagaaataaataaaagaaaacaaaaatacaatcaaaatgGCAGAC
ATTGATTGGTCAGATCCAGAAAAATCCATCGAAGGAATCAAGAAATTAAT
CAAAGCTGTTCCCGATTTCCCGAAAAAAGGGATCTTATTCCGAGATATCA
TGGGAATTTTCCAAGTTCCACAAGCAGTTCAAGCCATGGTTGATATCATG
TCTTACCACATCCAACAAAAACATCCTGAGTGTGATGCTATCGTTGGCTT
AGATGCAAGAGGTTTTCTCATGGCACCAATGATTGCAATCAAATTGAACG
TCCCCTTCATACCGGTCCGTAAACAAGGCAAGCTACCCGGAGAATGTATT
TCAGCGGAATCCGTCAAAGAATACGGCAAGGACGTACTGGAGATGCAAAA
AGGTTGCTTGAGAGAAGGACAAAAAGTTGTCATCGTGGATGATTTGCTGG
CGACTGGagGTACCATGGCAACGACATGTTCATTAGTTCGACAATTTGGA
TGTAGTGTGTCTGGTACCATATGTTTGGTGGAACTAGCAGAATTGAACGG
TGTTCAGAAAGTAGATGCCCCTTTTCATGCAATGATTAAATATTAGattt
attatatttatttaaGAACATCAATAACAACATTGGGGTTCGAAATGCAC
GAGTTCGAACGAATATCTTCCACTGTTTAATACTTTGGAAATTAGGGACA
CGAGTATGGGTCTAATGTGAAATGAAGTGCCTGGGACGAAACATTTAGGC
ATGTGAAAGTTTTCCCCGGCGAAACCCTTTTTTGGTCGAGTTGAAGTGCT
ATGACAAAGATTATTATAAATATGACGAAgtaaaccccgtacgccccccc
ccccttttgaaGTACTGTGGTAAAGATTATTATAAATAAAAGTGAAGAAG
TTTTTCCCCGACTTAAATTTTATTCGACTAAGATTTTCACTTGATTCAAA
GCGCTCAAAATCCGTCATTGGACCAATCTGAATTTTCTCAAAAGCATGAG
AAAACCTTTTTTCGGTAGCTACCTTTGAACGGTTTTTCAATAAATCTTTC
TTGAGGTTCAAGATAAAACCTTTTGAGTTTGTGGGGATACCATTTCCTTT
CACAAAGTCGCGTGTGATTTTTTTAGACGTATTTTGTAACTTGAAACGTG
GCGTATAAATTACCCTGTAAGCATAAATTCTATCAGATAGAGACGAAAAT
ATTTTGTAGTACATATTAGGAAAAATGGaaagtattttgaaattttaggt
atatattttgttttctttgtgtGATAAATttgtaaacagaaaaaaaacac
tctagtaatatttttatttttgtttgtaaCAGACACAATAGATACaactt
aaaacaaaaacaacaaca
Run BLAST on NCBI

protein sequence of TCONS_00061300-protein

>TCONS_00061300-protein ID=TCONS_00061300-protein|Name=TCONS_00061300-protein|organism=Clytia hemisphaerica|type=polypeptide|length=184bp
MADIDWSDPEKSIEGIKKLIKAVPDFPKKGILFRDIMGIFQVPQAVQAMV
DIMSYHIQQKHPECDAIVGLDARGFLMAPMIAIKLNVPFIPVRKQGKLPG
ECISAESVKEYGKDVLEMQKGCLREGQKVVIVDDLLATGGTMATTCSLVR
QFGCSVSGTICLVELAELNGVQKVDAPFHAMIKY
Run BLAST on NCBI

transcript from alignment at scaffold_355:270828..286600-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061300 ID=TCONS_00061300|Name=TCONS_00061300|organism=Clytia hemisphaerica|type=transcript|length=15773bp|location=Sequence derived from alignment at scaffold_355:270828..286600- (Clytia hemisphaerica)
TCTAGTAGAAATAAATAAAAGAAAACAAAAATACAATCAAAATGGCAGAC
ATTGATTGGTCAGATCCAGAAAAATCCATCGAAGGAATCAAGAAATTAAT
CAAAGCTGTTCCCGATTTCCCGAAAAAAGGGATCTTATTCCGGTAAGAAA
AAAATTACTTTAGGCGTAAAGACTTTCGCGAGCAGAAACTTTCGCCATTT
ATTTATATTTCGCGTTAAATTCGCGAAAGTAAATATCATAATATTTTATG
TTTTTATTACCCTTGAGAAATCATTGTTAATTCTCTAACTATCGTAGATA
TCTAATATCTACTATAGCCCATGGGAATTAGCAGTGATTTCNNNNNNNNN
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CTAATATCTACTATAGCCCATGGGAATTAGCAGTGATTTCTCAAAAACAT
TTCTTGTATAAACTGTACAGCATTTTTAACGTTTTATTTAAATCATTTAC
ACTGAAGATGACTATGTCGAAAAGCTTATGCTAAATTTTTAAATAAAAAA
CTTTCGTGTCTAATTCTTTACTGACTTGAATGATCAAAAAATATCATGAA
TTTCGCGATTTTTCGTCCTCGCGAAAGTTTCCGTTCGCGAAAGTTTGTAC
GCCTAAAGTAAATGACATTGGGCTGTTTCCATTCAGGGGGGGGGGGTTGG
ACGAAGCTTTTCAAGTCAAAAATGGTTCTTAGAAATATTTGGATACCCCC
TGGGAAATGGAAAATTTGCCAACGGAAAAAATCTTTTCGTATCAGTGAGG
GAGGGAAGACGAACTAAAATCATTCTTTTACCAACTAAATTTTTACAAAA
CTTTTTACCTCCTGGAAATTCTTCTCTGGTTACCATCTGAAAATGTTCCT
TCACCCTCTGTATTAGTCTGAATCGCAGACCTCTACAAAACCCCAGGTAG
TATATCTATAAGGAGCACGAATCCGTTAGTGGATGCCAGCAGCCTACCTG
TGTATGGATATAAAATGGAATACATTCTTATTTGGGCTACAAAGTAAATA
ATTTTCAATACTCGAGTGGAAACGTTGCTTGAACGAAAAATACGGCAATT
TTCTAAAATCTTGTTTCATTTCTGCTTGCTAGGAATTTTAAGGTACAGAA
TCAATTTTTTGGAGTTTTCTAACATTATTGCTTAAAGGCTTTGTTGGCTG
AAAACTGGCAAAAACCTATTATCTTTACCACAAGCTGTTCAAAGATATTC
TTGTATTACTTCGAATAAACGCCCCCTTCTTTTAAACGCCCCCCTCGATT
AAACACCCCTTCTAAAGAGAAAATTATTTAATAAACAGTACACCCCCCTC
AAATAAACGCCCCCTTTGAATAAACGTTTATTAGAAACTTGTGACTTTAA
TACTTCGATACCAGTGTTGACTGGGTTTGAAAAGGAAGATTTTAGTTATT
TCTTGTAACCAGAGCAGTTTTCGATGCAATTTTAGTCGTTGAACCAAAGA
AATTTTGCACTAAAATCCTGATAATGAACTAAAACAAAGGATATATTTGT
TCTAAATATTCGACTTCAGACTAAAATAATTTAATAAACGCCCCCTTCTT
TTAAACGCCCCCTCGAATAAACGCCCCTCCTAAAATCGATAAAATTAAAT
AAACGCCCCGGGCGTTTATTCGAAGTAATACGATAAGCTCTATCTTAATC
ATAAAATGTGTTAAAACTTCAAAACTTCAAAAAAATTTTCTTTCTCCAAT
AGAGATATCATGGGAATTTTCCAAGTTCCACAAGCAGTTCAAGCCATGGT
TGATATCATGTCTTACCACATCCAACAAAAACATCCTGAGTGTGATGCTA
TCGTTGGTAAGTTTGCTTTTTACTGAGTTTTACTGAATTTATTATTACAA
TCAACTCTCTTTAATTCGAACCACAATAATGCAAAACAGACTAAAACTTT
GGTCTCCCTACCTCCGCTGGAAAGAAGTGTGAAACGCTCTCTATAATTCG
AAGAAAAGTCTTTGAAGTCCCTTGAAGATCGAATTAAAGAGAGGCAACTG
TAGTTGTTGTTTTCTATTCGTATTTAATTACTTCTGATAAATTTTCTTTT
TCTTCAACTATGTTTTGTCCTTAATTATTAGTCGAACGAATAAACCAAGA
AACTTGAGTATAGACTGGGATTATTACACGTATTTTATAAGAACGTCAAA
AGTTTTTGAAGCATTTGGATGTTTTTAAGTTTTTCATTTTTAAGCCCTAA
AAACGTTCATAAAATTATTTTCGTCATTTTGTGAGTTTTTTTTGTGCAAT
GTTTTAGAAAATTGTGTTTTTGAGTTCACAACATACACCTTAAAAATTAT
TAACTTTTTTTATTATTTGGCCAACAAAGCTTTATGTTATTAAAAAAAGC
GCATTTGAGAGAATTATTCACATGAAGGACTTGTGTTGTGTCACCCCAGT
TTACAAGATTACAAGTCTTTATTTTCATCTCAATTCTTCCTATATTTTTC
ATATAACTTCTTCACAGGCTTAGATGCAAGAGGTTTTCTCATGGCACCAA
TGATTGCAATCAAATTGAACGTCCCCTTCATACCGGTCCGTAAACAAGGC
AAGCTACCCGGAGAATGTATTTCAGCGGAATCCGTCAAAGAATACGGCAA
GGTGTGAACAATTTTTTTATTTTTGTGAACCGTTTTTCCTAAACTTGTAT
CAAAATTTTCGAGAATCTTGACCCTTTGAGAGGGAAAGTTTAGTGCGATT
TTGGAACCTAAACTATGAATTTGTACTCCGTTGAGGGACTTTTGAAGTAT
GAAAAAGGGTAACCGTATGACTCCCACATATCCGTCGCCTGTTTTGCCTA
AGTACACCCCCCCCCTCGGGTTTCTGGACGGGAAGGTGACATTTACAAAA
AACAACGTCTTTTGAAAGACAAGGTTAATAATATACTTTTTGTATCCTAT
ATTTCATTGTTTCATTTCTCATAATTTTTTATATCCTTTACGAAAAGCTG
AATATCTTCCAATCTCCAAACCACTTAAGCCTTCAAGTGCTTTATTTAAA
TCATTCGTTATGTCGTCACAGAATTCCTTCGTTCGCTCGCTCCTTTTTTC
AACTCTTGTCTTCGTTTCTTTCTTCTTCAGTTTATTCATTATTCTCTCCT
TCGTGGATAAAACATTCGAATTTTCTTTTTCACTCAATGATGCTGAGGCC
CTTGTATCTTCTTCGTAATCAAACACGTTTTGAGTATCTGGAAACTCTCT
CCAACAATCACATTTACAGAATTCCAAATCAAAAGTTGTTTCTTCTTTTG
ATGAAGCTTTGTTTTCGGAGCTTTCCGCTTCTAATCCACGCGATGTCTCG
AGAAAGAGATTCAAAGTGTTGGATAAAAATGATTGCTGCCGTTTCTAATT
GAAAGAAAATGAAGATATAAAGTCAAGGTGACTGTGGTATAGTGGTCATT
GATCTTAGTTGCTGCACAGGCGACTGAGGTTCGATTCCCACTAGCGGCGG
TTCACTTGGCAAGTGAATGAACCTATGTTATGTGAGGGGACTTGGGTATT
CAGTTCCAAGGTGCTGACGGGGTGCTAATTGAAAGCGTCTATAGTTGCAA
AAATGGGCCTTAAAGCCTCCTGCGACTCAACCAAATAGAAATAAAAATGT
TGAGTATGGATCATACAGAGACACCATACTCTCAGGTGCCTTAAAAACGA
GGGGGGGTGCAAAAACCTTCAAATTTTAGTAAACGGGTTGGACATAATTA
CCGGGGGTTAGAAATTGGAAAAATTTTCGAAAATTTATAACTGGGTGGGG
ACGTTTACGTTTTTTTATAAGAACATCTAAAGTCTTGAAGTCTTCGGATG
TTCTTAACTTTTTGAGTTTTAAGCCTAAAAATGTTCTTAACATGTTCTTA
TTTTGACCATATTGTGAATATTTTTGACCATTTTCCTAAGAAAAAGAGTG
AGTCTACAAAGCCTTAAAATGTTCTTACAGTAGCTTGTTCTTAACATTTT
GGCCATCGAAGCGTTATGTTCTTATATAGTTTGTTCTTATAAAAAAACGT
TTATTTGGGAGTTTAGAGTACATCATGGCTATCACGAAAACAGTGGCAAT
GTGGCAGGAACTCACTTATCACTGCAATAACTATTTAGAATATTAGAATG
TGCACCCACCTTCAACTTATACAATCGCTGGTTGACCATTCTACGTTTCG
TTTTCGTCTCCACGATATCTTCTCTTACTTCACCACGCACTGACTTTAAT
TCACCTAGCCTCGTTCCGACACGACTATTTTCTCTTTCAGCCTCGTACTG
TTTAATTTCAAGTCGATTGATACCATCTGTTAAATTTTTACTGTATTTTG
CGGCTTCCTTTGAAATGTTTTGATATTTGGTATGCAGTTTTCTGCATTCC
GCTTCCAATAATTCAATGTTATCAACGTGGGCCAGTCTTGGGAATTCTTT
AGGAACTGTATCGTATGGTTTGTGCTTTCCAACGTGTCTTTCCTCAGATG
CGTCAGCCTGGAGGACTCTTTCGTTAGCCTCTGATTGCACCAAATCTAAG
CGGTCCTGTCTGTACATTTCTCCAACAAATAATTTCGAAAAGTAATTATA
GTTAAAAGATTCTCTTTTTCTACCTCTGTACTAAATCTCTGTTCTCTTGG
TGTCAGATATCAATAAAAGATTATTTTTTTTATTTGACGTCAAATTTTTA
TATCTTGACGTCAATTTCATCACGTGGAAAATTGATAAAATGTTTGAAAA
TTTTACTCACTTTTTGATCACGTCACCGATTTTCTACTCTTTTTTATGGC
GCGCCGAATTACTTTTTATTATCAACTTTTTTTTCGACACCAACTTTTTT
TTTTCGACACCAATTTTTTGTTTTCGACACCAACTTTTGTTTTTTGACAT
TAATTTTTTTTTTCTGATACCAACTTTTCGTTTTTTGCGACCAACTTCAT
GTTTTTTCATACCATCTTTTCTCCGACACCAACTTTTTTTTTTTGACATC
AATTTTTTTTTTCTGATACCAACTTTTCGTTTTTTGCGACCAACTTCATG
TTTTTTCATACCATCTTTTCTCCGACACCAACTTTTTTTTTCTGACACCA
ACTTTTTTTCCGACACCAACTTTTTTTCCGATACCAACTTTTTTTCGAGA
CTCGGATACGAAAACTTCTTTTTTACGAAGTCAACCTTTTTGGTTATTGT
CTCGTCCACCCAACCTGATTAATATAATGTGTGTCTTGGGGCTTTAACAA
ATTGCCCGCCATGTGAAACTTTTCCAGATGGAATTGAAAAAATAAAAAGC
TGAAACACCAGCACGAATACTGACTAGGACGAAGTCTGGAAGTTTGTTTT
GGTTTTAACTTGAAGTCATTCCTTGTTAAGTACTTTGTGTTTTACTTCAA
ATTTGGTTTGTGAACTTTCTGTTTTTTTTCTGTTGTTTTTTCCTATCGCT
AGATTTCACAAAATGTAGTCCTCCAAAACAAAAGAATCACTAGATACAAT
CTGTCGTCATGATTGCGGTGCGTTCTATGCCCTTTTTGAAAAATAAGTAG
CTGGGACATAAGTAGCTTCAATTTCTCTTGCCTGAGAAGGGTTAAAGATT
CGCCTCTAGCCCTTCGGGCTTGAAACTCAATGGTCATCACGCCCAATCGC
GCCGCCTTTTTAGAGCAGAATGGATGATCGGCAATGATGTAGTAAAGCCC
GCCCGGAAAGGCTAGCTAGACGGCGTGCTTTTGCTGAAAAGTGTGTCGAA
TAAGTCACGTGACATTGTAATAGAATTTCAGCGCTTGACCAATCAGAAGC
TTTGCAGATTTTCGGAAACAGTAGCAGAAATATTTTTTTCGATGTTCATT
TTTTTTTTGCTTGGAAGAGCTTAAAGCACTCCATCTAGCCCTTCGGGCTT
TACAGAAATCTGTGATCGGATGCCCGCTATATAAACGTAAAGGCCTTTTT
ACACTTTGAGTCGAGCTTTGAGTAATCAACGTTAGCAAGTTTTTTTTTTT
TTTTTTTTTTTTTCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCATATATTACAAAACATTACTTAAACATAAAAT
ATAGTCCCTCCCCCCGCTAGGAACTAACGTTATATCGCCAGAGGTACTAG
ACTATGTAAAAGAAAAGTAAAATAAATAAATAGGCAAAATAAAAAAAATA
AAAAAATCTTGGAGGAGGAAGCTACAATTGTTAGGTATTTAAAAGCCTAA
AATAAAGCACCGCTAAACCTTCCAGTTTCGTTAAGAAATTCAACAACAAC
GTTAGCAAGTAATCGAGACAAGAGTTGGTATCGGAAAAAAAAAGTTGGTG
TCGAAAAAAAAAGTTGGTGTCGAAAAAAAAAAGTTGGTGTCGAAAAAATA
AAGTTGGTGTCGAAAAAAAAAAGTTGGTGTCGAAAAAAAAAGTTGGTGTC
GAAAAAAAAAAGTTGGTGTCGAAAAAAAAGTTGGTAATAAAAAGTAATTC
GGCGCGCCATACTTTTTTTTTATCATTAATTTCTTGATCTCCAAAAGTAT
ATTGGTTCTTCTTACAAGAAATTGAAATATTTTATGTATATGTAATGTAT
ATAAAATTCTACGACTTGGAGTCTTCATAATTCATGTAATACAGTGATAT
GGGTGTTGTATGATAATATACGATAATTGTTACGGGATAATATCTGTTTG
TATAATCAATTATTGCCCCTTCAATTATTTTTGGCTTATTTTTACTACAT
ATTGCTGAATAAGTTGTCTCGCATGCTAGACTATGTTTATTTCATTTCCA
ATTGAACGTGTTGCAATAAATAATTATTTTGGACACTACTTAGGTAAAAA
TAACATTATAATCATAATGAGTTACATATTAAAACAAGCATCTTCAACAT
ATTATCAATTTCTTGTAGGACGTACTGGAGATGCAAAAAGGTTGCTTGAG
AGAAGGACAAAAAGTTGTCATCGTGGATGATTTGCTGGCGACTGGAGGTA
AATATTTTCTTCTATTCAACAAATACTCGCTCTCTCTAATTTGATTTTCT
ACTTTACGATAAGCTCAATTTTTCAATAATATTGAAAGTCATCATCAACA
AGAAACTCTCATAAACGACGCTCTATTATTTAATATCTTTATTCGAAGAA
ATCATATTCCCTTGAAAATCGAATTAGAGGTCGCTTTAGCTGAAATAGTT
ATACTTGTATCTTGCTTGTTAGCCTTACTTGCTTAAATCTTTTGATTTTC
ATTACAAATGAAATGTTACCCTTTTTTGAACTGTAACCTTTGGACATAAA
ACCTACAGATTTAAAATGTAATCCTATTCGGTCTAAGTTTTAAAACAACC
TTTTCCTTTTCCTTCATGGTCCTCTGCAGCTACTTATATTTAATTTACAA
AATATTCGCTTCAGGTACCATGGCAACGACATGTTCATTAGTTCGACAAT
TTGGATGTAGTGTGTCTGGTACCATATGTTTGGTGGAACTAGCAGAATTG
AACGGTGTTCAGAAAGTAGATGCCCCTTTTCATGCAATGATTAAATATTA
GATTTATTATATTTATTTAAGAACATCAATAACAACATTGGGGTTCGAAA
TGCACGAGTTCGAACGAATATCTTCCACTGTTTAATACTTTGGAAATTAG
GGACACGAGTATGGGTCTAATGTGAAATGAAGTGCCTGGGACGAAACATT
TAGGCATGTGAAAGTTTTCCCCGGCGAAACCCTTTTTTGGTCGAGTTGAA
GTGCTATGACAAAGATTATTATAAATATGACGAAGTAAACCCCGTACGCC
CCCCCCCCCTTTTGAAGTACTGTGGTAAAGATTATTATAAATAAAAGTGA
AGAAGTTTTTCCCCGACTTAAATTTTATTCGACTAAGATTTTCACTTGAT
TCAAAGCGCTCAAAATCCGTCATTGGACCAATCTGAATTTTCTCAAAAGC
ATGAGAAAACCTTTTTTCGGTAGCTACCTTTGAACGGTTTTTCAATAAAT
CTTTCTTGAGGTTCAAGATAAAACCTTTTGAGTTTGTGGGGATACCATTT
CCTTTCACAAAGTCGCGTGTGATTTTTTTAGACGTATTTTGTAACTTGAA
ACGTGGCGTATAAATTACCCTGTAAGCATAAATTCTATCAGATAGAGACG
AAAATATTTTGTAGTACATATTAGGAAAAATGGAAAGTATTTTGAAATTT
TAGGTATATATTTTGTTTTCTTTGTGTGATAAATTTGTAAACAGAAAAAA
AACACTCTAGTAATATTTTTATTTTTGTTTGTAACAGACACAATAGATAC
AACTTAAAACAAAAACAACAACA

Coding sequence (CDS) from alignment at scaffold_355:270828..286600-

>TCONS_00061300 ID=TCONS_00061300|Name=TCONS_00061300|organism=Clytia hemisphaerica|type=CDS|length=2775bp|location=Sequence derived from alignment at scaffold_355:270828..286600- (Clytia hemisphaerica)
GTACCATGGCAACGACATGTTCATTAGTTCGACAATTTGGATGTAGTGTG
TCTGGTACCATATGTTTGGTGGAACTAGCAGAATTGAACGGTGTTCAGAA
AGTAGATGCCCCTTTTCATGCAATGATTAAATATTAGGACGTACTGGAGA
TGCAAAAAGGTTGCTTGAGAGAAGGACAAAAAGTTGTCATCGTGGATGAT
TTGCTGGCGACTGGAGGCTTAGATGCAAGAGGTTTTCTCATGGCACCAAT
GATTGCAATCAAATTGAACGTCCCCTTCATACCGGTCCGTAAACAAGGCA
AGCTACCCGGAGAATGTATTTCAGCGGAATCCGTCAAAGAATACGGCAAG
AGATATCATGGGAATTTTCCAAGTTCCACAAGCAGTTCAAGCCATGGTTG
ATATCATGTCTTACCACATCCAACAAAAACATCCTGAGTGTGATGCTATC
GTTGATGGCAGACATTGATTGGTCAGATCCAGAAAAATCCATCGAAGGAA
TCAAGAAATTAATCAAAGCTGTTCCCGATTTCCCGAAAAAAGGGATCTTA
TTCCGGTACCATGGCAACGACATGTTCATTAGTTCGACAATTTGGATGTA
GTGTGTCTGGTACCATATGTTTGGTGGAACTAGCAGAATTGAACGGTGTT
CAGAAAGTAGATGCCCCTTTTCATGCAATGATTAAATATTAGGACGTACT
GGAGATGCAAAAAGGTTGCTTGAGAGAAGGACAAAAAGTTGTCATCGTGG
ATGATTTGCTGGCGACTGGAGGCTTAGATGCAAGAGGTTTTCTCATGGCA
CCAATGATTGCAATCAAATTGAACGTCCCCTTCATACCGGTCCGTAAACA
AGGCAAGCTACCCGGAGAATGTATTTCAGCGGAATCCGTCAAAGAATACG
GCAAGAGATATCATGGGAATTTTCCAAGTTCCACAAGCAGTTCAAGCCAT
GGTTGATATCATGTCTTACCACATCCAACAAAAACATCCTGAGTGTGATG
CTATCGTTGATGGCAGACATTGATTGGTCAGATCCAGAAAAATCCATCGA
AGGAATCAAGAAATTAATCAAAGCTGTTCCCGATTTCCCGAAAAAAGGGA
TCTTATTCCGGTACCATGGCAACGACATGTTCATTAGTTCGACAATTTGG
ATGTAGTGTGTCTGGTACCATATGTTTGGTGGAACTAGCAGAATTGAACG
GTGTTCAGAAAGTAGATGCCCCTTTTCATGCAATGATTAAATATTAGGAC
GTACTGGAGATGCAAAAAGGTTGCTTGAGAGAAGGACAAAAAGTTGTCAT
CGTGGATGATTTGCTGGCGACTGGAGGCTTAGATGCAAGAGGTTTTCTCA
TGGCACCAATGATTGCAATCAAATTGAACGTCCCCTTCATACCGGTCCGT
AAACAAGGCAAGCTACCCGGAGAATGTATTTCAGCGGAATCCGTCAAAGA
ATACGGCAAGAGATATCATGGGAATTTTCCAAGTTCCACAAGCAGTTCAA
GCCATGGTTGATATCATGTCTTACCACATCCAACAAAAACATCCTGAGTG
TGATGCTATCGTTGATGGCAGACATTGATTGGTCAGATCCAGAAAAATCC
ATCGAAGGAATCAAGAAATTAATCAAAGCTGTTCCCGATTTCCCGAAAAA
AGGGATCTTATTCCGGTACCATGGCAACGACATGTTCATTAGTTCGACAA
TTTGGATGTAGTGTGTCTGGTACCATATGTTTGGTGGAACTAGCAGAATT
GAACGGTGTTCAGAAAGTAGATGCCCCTTTTCATGCAATGATTAAATATT
AGGACGTACTGGAGATGCAAAAAGGTTGCTTGAGAGAAGGACAAAAAGTT
GTCATCGTGGATGATTTGCTGGCGACTGGAGGCTTAGATGCAAGAGGTTT
TCTCATGGCACCAATGATTGCAATCAAATTGAACGTCCCCTTCATACCGG
TCCGTAAACAAGGCAAGCTACCCGGAGAATGTATTTCAGCGGAATCCGTC
AAAGAATACGGCAAGAGATATCATGGGAATTTTCCAAGTTCCACAAGCAG
TTCAAGCCATGGTTGATATCATGTCTTACCACATCCAACAAAAACATCCT
GAGTGTGATGCTATCGTTGATGGCAGACATTGATTGGTCAGATCCAGAAA
AATCCATCGAAGGAATCAAGAAATTAATCAAAGCTGTTCCCGATTTCCCG
AAAAAAGGGATCTTATTCCGGTACCATGGCAACGACATGTTCATTAGTTC
GACAATTTGGATGTAGTGTGTCTGGTACCATATGTTTGGTGGAACTAGCA
GAATTGAACGGTGTTCAGAAAGTAGATGCCCCTTTTCATGCAATGATTAA
ATATTAGGACGTACTGGAGATGCAAAAAGGTTGCTTGAGAGAAGGACAAA
AAGTTGTCATCGTGGATGATTTGCTGGCGACTGGAGGCTTAGATGCAAGA
GGTTTTCTCATGGCACCAATGATTGCAATCAAATTGAACGTCCCCTTCAT
ACCGGTCCGTAAACAAGGCAAGCTACCCGGAGAATGTATTTCAGCGGAAT
CCGTCAAAGAATACGGCAAGAGATATCATGGGAATTTTCCAAGTTCCACA
AGCAGTTCAAGCCATGGTTGATATCATGTCTTACCACATCCAACAAAAAC
ATCCTGAGTGTGATGCTATCGTTGATGGCAGACATTGATTGGTCAGATCC
AGAAAAATCCATCGAAGGAATCAAGAAATTAATCAAAGCTGTTCCCGATT
TCCCGAAAAAAGGGATCTTATTCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038462XLOC_038462Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061300-exon-scaffold_355-1575043694:286459..286600TCONS_00061300-exon-scaffold_355-1575043694:286459..286600Clytia hemisphaericaexon
TCONS_00061300-exon-scaffold_355-1575043694:277395..277498TCONS_00061300-exon-scaffold_355-1575043694:277395..277498Clytia hemisphaericaexon
TCONS_00061300-exon-scaffold_355-1575043694:276600..276733TCONS_00061300-exon-scaffold_355-1575043694:276600..276733Clytia hemisphaericaexon
TCONS_00061300-exon-scaffold_355-1575043694:272154..272232TCONS_00061300-exon-scaffold_355-1575043694:272154..272232Clytia hemisphaericaexon
TCONS_00061300-exon-scaffold_355-1575043694:270828..271736TCONS_00061300-exon-scaffold_355-1575043694:270828..271736Clytia hemisphaericaexon
TCONS_00061300-exon-scaffold_355-1510915933:286459..286600TCONS_00061300-exon-scaffold_355-1510915933:286459..286600Clytia hemisphaericaexon
TCONS_00061300-exon-scaffold_355-1510915933:277395..277498TCONS_00061300-exon-scaffold_355-1510915933:277395..277498Clytia hemisphaericaexon
TCONS_00061300-exon-scaffold_355-1510915933:276600..276733TCONS_00061300-exon-scaffold_355-1510915933:276600..276733Clytia hemisphaericaexon
TCONS_00061300-exon-scaffold_355-1510915933:272154..272232TCONS_00061300-exon-scaffold_355-1510915933:272154..272232Clytia hemisphaericaexon
TCONS_00061300-exon-scaffold_355-1510915933:270828..271736TCONS_00061300-exon-scaffold_355-1510915933:270828..271736Clytia hemisphaericaexon
TCONS_00061300-exon-scaffold_355-1491911889:286459..286600TCONS_00061300-exon-scaffold_355-1491911889:286459..286600Clytia hemisphaericaexon
TCONS_00061300-exon-scaffold_355-1491911889:277395..277498TCONS_00061300-exon-scaffold_355-1491911889:277395..277498Clytia hemisphaericaexon
TCONS_00061300-exon-scaffold_355-1491911889:276600..276733TCONS_00061300-exon-scaffold_355-1491911889:276600..276733Clytia hemisphaericaexon
TCONS_00061300-exon-scaffold_355-1491911889:272154..272232TCONS_00061300-exon-scaffold_355-1491911889:272154..272232Clytia hemisphaericaexon
TCONS_00061300-exon-scaffold_355-1491911889:270828..271736TCONS_00061300-exon-scaffold_355-1491911889:270828..271736Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061300-proteinTCONS_00061300-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_355supercontigscaffold_355:270828..286600 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.2086	23.4134	18.6327	15.4544	3.99696	3.19677	10.0239	11.0185	14.1423	17.2524	15.491	12.4658	16.5685	15.9776	18.0605	24.8195	32.6099	27.4042	7.8228	10.6509	19.0054	19.0188	15.8674	16.7612	24.4463	28.7096	27.063	21.5082	32.1741	21.9322
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005764Ade_phspho_trans
IPR000836PRibTrfase_dom
IPR029057PRTase-like
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003999adenine phosphoribosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006168adenine salvage
GO:0009116nucleoside metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006168 adenine salvage
biological_process GO:0009116 nucleoside metabolic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003999 adenine phosphoribosyltransferase activity
Blast
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BLAST of TCONS_00061300 vs. Swiss-Prot (Human)
Match: APT (Adenine phosphoribosyltransferase OS=Homo sapiens GN=APRT PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.513e-39
Identity = 71/177 (40.11%), Postives = 111/177 (62.71%), Query Frame = 3 
Query:   69 EKSIEGIKKLIKAVPDFPKKGILFRDIMGIFQVPQAVQAMVDIMSYHIQQKHP-ECDAIVGLDARGFLMAPMIAIKLNVPFIPVRKQGKLPGECISAESVKEYGKDVLEMQKGCLREGQKVVIVDDLLATGGTMATTCSLVRQFGCSVSGTICLVELAELNGVQKV-DAPFHAMIKY 593
            +  ++ +++ I++ PDFP  G++FRDI  + + P + +A + +++ H++  H    D I GLD+RGFL  P +A +L +  + +RK+GKLPG  + A    EYGK  LE+QK  L  GQ+VV+VDDLLATGGTM   C L+ +    V   + LVEL  L G +K+   PF ++++Y
Sbjct:    3 DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQY 179
The following BLAST results are available for this feature:
BLAST of TCONS_00061300 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
APT2.513e-3940.11Adenine phosphoribosyltransferase OS=Homo sapiens ... [more]
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