TCONS_00061292 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061292
Unique NameTCONS_00061292
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2093

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061292 ID=TCONS_00061292|Name=TCONS_00061292|organism=Clytia hemisphaerica|type=transcript|length=2093bp
AGAACAACTTGAGAACACTCACTATAGAGAATCGTTAACTTCAATTGTTG
GACATCACACCGATCATTGGAGAATCGAAGAATATCACAAATAAAGCCAA
CCACACAGAAAGAAATACCACATCTCCAGAAATGGTTTCACCAAAGCTGC
TCATTACCATCTTTCTGATGTTCTTCTGTATCAACAAATGCGCACCATCA
ACGCTCCCTGTTTCTGACAGCACATTGGACGCTAAATATGGTGATCCTTA
CCAAGATTGTGTCGATGTCAACGTATGTTATAATTGTCGAGGAACTGGAG
GACGTGATCAATTCCAAACTATGGATGGATCCTGCAACAATCTGGCAAAC
CCATCTTATGGCGCTGCTCCCACAAAACACAAACGATACTTGCCTGCGCA
ATATTTGGTCGGAACAACGGGTTATCCACGTGGCTTTCCGCCAAACAGTA
ACATGAAGTCTGGGCACGAGGTTGCCCGTAAAGCCTTCCAATCAGTTGAA
AAGTTTGAAGGGAACAACAATCAACCTCACAAAACATCCATCTTGTTCAT
GACTTTTGGACAATTCATTGATCACGATATCACAGGAACAGATAAAGCTC
CCACGGGCGGTTGTGATGTGACATGCAAGGGAGCGACAGGAGGAATTGAA
CACCAGTATCCATGTAATCCCATCTACAAAGATCAATCTTCGACGGGCGC
CAAACGATGCACGAAACTGACCAGAACACAAGCAGCTTGCCGTTCAAGCT
CAACTGAAATACGAGAACAGGTCAACTTTTTAACTTCTTTTATTGACGGG
TCAGCTGTTTATGGAAGTTCGGATAAAAAAATGCAATTCCTGAGAACGAA
TGATGGATCAGGGAAATTGCGAACAACAACAGGCGATTTGTTGCCTGAAG
ATGAATATAATAATGAACCGTGTAACAACGAAGGTTTCGAAGGCTGCTTC
GCTACAGGTGACAAACGAGGCTCCGAAAACCCCGCATTGGCTGGCTTGCA
CACACTCTGGGTACGCGAACACAATCGTATTGCCACCGAGTTAAAAGAAC
TGAACAAATATTGGAGTGGATCTAAGATTTTTTGGACGACGCGTAAAATA
GTGGCTGCGGAAATGCAAAATATCTTACTGAATGAATGGCTACCCATGCT
ATTTGATACAAACGACATTGACGGTTATGACACGGACGTCGATCCGTCAA
TCAGTAATGTCTTCGCGCATTCCGTTTTCCGATTCGGACATACATTGGTA
CCCGATAAATTCCCACTTTACGATAACAATTTTAATCCGTATGCCGCGAA
ACCAATACTGACACTGCGCGAAGGCTTTCATCATATCAACCCTATTAAGA
ATCATGGAATCGAACCCATCATGTACGGGTTAATCGGTAACGAATCGGAG
ACTTTCGATACCAAATTCGCACAAGCTATCTCCCGCCATTTGTTCATTCC
TCTTGGTGAAGGTGGTTTGGCGGATCTCACAGCTATCAATATTCACCGTG
GGCGTGATCACGGTTTACCGCCCTACAATGAATGGCGTCAATTTTGTggt
ttttcaaaacttaaagaCTGGGACGACTTGAATGGAGATATGGAAAGCGA
AACgattaaaaatttgaagaaagtttACACCTCTGTTGAAGAAATCGATA
TTTTTGTTGGCGGGATCGGTGAAAAACCGGTACACGAAAAAGTGATCGGA
AAAACATTCGGCTGTATCATGAAGAAGCAATTCAAGGATCTTTTCAAAGG
TGATCGGTACTTTTACACCAACTACGTTTTCGACTATCCACAAACTACTT
CTATAGGGAAAGTGACCATGAGACAGGTTTTGTGTGATAATTTGAAAGGT
GTGGTCTCACTACATGCGAACCCATTCGTACCCTTCGATGATGGTTACCA
CACAAGACATGCTTGTCAAACAGACTACAGAGATCCACATTATGAAGGAG
CTAATTTGGACCTCTGGAAAGACATCACTTattaattaaattttattttt
aattgagtTAGGATAGATTAACTCTGAGTTTGGTTGTAAAGTGTAAAATG
CGTCGCTTAtcgagccccccccccagcggtttgtgtgatggcg
Run BLAST on NCBI

protein sequence of TCONS_00061292-protein

>TCONS_00061292-protein ID=TCONS_00061292-protein|Name=TCONS_00061292-protein|organism=Clytia hemisphaerica|type=polypeptide|length=617bp
MVSPKLLITIFLMFFCINKCAPSTLPVSDSTLDAKYGDPYQDCVDVNVCY
NCRGTGGRDQFQTMDGSCNNLANPSYGAAPTKHKRYLPAQYLVGTTGYPR
GFPPNSNMKSGHEVARKAFQSVEKFEGNNNQPHKTSILFMTFGQFIDHDI
TGTDKAPTGGCDVTCKGATGGIEHQYPCNPIYKDQSSTGAKRCTKLTRTQ
AACRSSSTEIREQVNFLTSFIDGSAVYGSSDKKMQFLRTNDGSGKLRTTT
GDLLPEDEYNNEPCNNEGFEGCFATGDKRGSENPALAGLHTLWVREHNRI
ATELKELNKYWSGSKIFWTTRKIVAAEMQNILLNEWLPMLFDTNDIDGYD
TDVDPSISNVFAHSVFRFGHTLVPDKFPLYDNNFNPYAAKPILTLREGFH
HINPIKNHGIEPIMYGLIGNESETFDTKFAQAISRHLFIPLGEGGLADLT
AINIHRGRDHGLPPYNEWRQFCGFSKLKDWDDLNGDMESETIKNLKKVYT
SVEEIDIFVGGIGEKPVHEKVIGKTFGCIMKKQFKDLFKGDRYFYTNYVF
DYPQTTSIGKVTMRQVLCDNLKGVVSLHANPFVPFDDGYHTRHACQTDYR
DPHYEGANLDLWKDITY
Run BLAST on NCBI

transcript from alignment at scaffold_355:88105..93854-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061292 ID=TCONS_00061292|Name=TCONS_00061292|organism=Clytia hemisphaerica|type=transcript|length=5750bp|location=Sequence derived from alignment at scaffold_355:88105..93854- (Clytia hemisphaerica)
AGAACAACTTGAGAACACTCACTATAGAGAATCGTTAACTTCAATTGTTG
GACATCACACCGATCATTGGAGAATCGAAGAATATCACAAATAAAGCCAA
CCACACAGAAAGAAATACCACATCTCCAGAAATGGTTTCACCAAAGCTGC
TCATTACCATCTTTCTGATGTTCTTCTGTATCAACAAATGCGCACCATCA
ACGCTCCCTGTTTCTGACAGCACATTGGACGCTAAATATGGTAAGGCGTT
TACACTAGCTTACTTACATTTTCATTTTGGATATTAACATACCAGCTATT
ACCACTGACCTTTATATATCCCTGGACCAAGCTATATCCACCGCCATCTT
TGATCGAAGCTTTCTTTGTCGTGATGTCATCACGTTTGCTAGGCCTTGGA
TTGAGAATGCCATAAAATTATCAAATTTCTCAACTCATAGCAAACGAGTG
ACACACCAGTTTCATTTGAAAGAGTTACAATTAGTTACAAAATGAACCAA
ACCCACTGACCTATATTTAAAACCCTGGACTAAGCTATATCCGCCATCTT
TGATCGGAGTTTTTTGAAAAGTGGTACCCGAGGAGAAGCCATTGCAATGT
TAAAAATTAACGTCTAACGCCGCTACATCATCAAAAGAATTTGAGGAAAA
GGTAGACCTAGCGCTCTCGATGCATTTACACCGCTATCGAGTAGTGCCGC
CATTAGGGTACCACTTTTCAAAAAACTCCGATCAAAGATTTTGGTTGGCC
GAGATTGAGTAGCTTGGATATAAAGGTCAGTGACCAAACCTCAAAAAAAC
CTCTCTTAGGATTCAGGGTTCAGTGGTCCAGTCCGCACATACCCAGAGTT
CCCTGACCCCAGCCTCAGTGTATAATATAACAACTTTTCTTTCCACATAT
AACAGGTGATCCTTACCAAGATTGTGTCGATGTCAACGTATGTTATAATT
GTCGAGGAACTGGAGGACGTGATCAATTCCAAACTATGGATGGATCCTGC
AACAATCTGGCAAACCCATCTTATGGCGCTGCTCCCACAAAACACAAACG
ATACTTGCGTATGTTAATTATTTCATCTATAACACTTTATAACAAAGCAA
CTGTAGTGCAGTGGTAGAGTATCCGGCTACGGTTCGCAAGGTTGTGGGTT
CAACCCCTAGCCGGGTCATACCAAAGGTTCTCAAAATGGTACTTGATGCT
CTCTGCTTGATGCTCAGCTATTAAGAGAAGGATCAAGGATAATTGGAGAA
ATCCAGGGAGAAAGAGTGGCGCCCTCCCCTACCTTTGGGTAGATAGCTAT
CGAAAGAGGAGATTTGAGTCGCCTCCGACTGCGGTCGCAGACTTACTTAC
TTATAGACCATTTGGAGTAGGGAGGCTAAGATTTTGGGAAAAAATGTGGG
CCACCATGGTTGAGCAACGAAGGAAATTATACGCCCTTTTTACACCCTCT
AAACACCCTAAAACGTTATTCAATTGCGGAGAAAAACAGTCGTTATGATT
TTAATTGGTCTGTCGAAAGTTGTTCAATGTACATAAGTCAGCATAGGTTT
CAATATGAGAGGTCTGCAAAAAGTATCTTTCTCCTTTTTAACACGAGAGC
GTTGCAAATTTATTTGAGTCGTCCAGGATTTATGTTTAAGGACACAGCCT
AATTAACTAAATTAGCCCAAAAGTTTGAATGTAAAGAGATATTGATTATG
TTAGGGCTTTTGAACTGAAAGGTCAAGAAAGCCTGGTAATCGAGATTCTG
GAGTCATTATCCTCTATAATTGACTAGGTTAAGATTTACATCTGGGAAAA
TTAGTCACTAGGAAAAAATATATTTTCCATCAAATTTTTTACCATGAATT
CTTTTTTCATCATTTCTAGCTGCGCAATATTTGGTCGGAACAACGGGTTA
TCCACGTGGCTTTCCGCCAAACAGTAACATGAAGTCTGGGCACGAGGTTG
CCCGTAAAGCCTTCCAATCAGTTGAAAAGTTTGAAGGGAACAACAATCAA
CCTCACAAAACATCCATCTTGTTCATGACTTTTGGACAATTCATTGATCA
CGATATCACAGGAACAGATAAAGCTCCCACGGGCGGTTGTGATGTGACGT
AAGTTTATTTCTCATATATTTTTTATCAATACACTCTTCTCGAGATGCAT
AAATTTATTGTTGTCATCGTTTTCAAACAGATTTCATTGCTATAAAATTA
CATACTCACAATGATAATTGTGTTGTTTACACTTCATGAGACATTTTGAA
TTTCAAGTATTTTTGTTTTAGAGTTAATGTTTGCCTTTTGGGAATATAAA
TTGGTTTAAATGTATAATTTCATAGCAATGAAATCTGTTTGAAAACGAGG
ACTCCAATAAATTTATGGATCTCGAGAAGAGTGTATTGGCGTATACTTTA
ATGGGATAAATTTTCGCGGGGATTAAATTTCGCGGTTGAGCTCATCCGCG
AAATTTTAAGATTTCGCGGGGATTAATTTTCGCGGATGAGGGATTTTCCT
GATTTTTCGAGGGGGTTTAATTTCGCGGATTGGGGTACAAATCAAAATTT
TTGAAAAGTGTCAAAACATTGAAATAAAATTTTTCCAGGAAAATTAAGAA
TTATTTTTTCAAGTAATAAGAGGGTGTTTTGGAAAAGGGCGAGGAGATAT
ATGTATTACAAAGAACACTGTTTGCAAATGCTGCTGCCAAAACAAAGCGT
CCGAGTAAACCAGAAAACCCATCTGTTACCCCGAAGACATCTAATGCAGT
ATTTTGTTAGATTAGGAAGTTTTTTAACTTGTTTTCCGTTTTCCCTCCTT
TGCTTACATATCCTTTTAGATGTTTAATTTCAAGCCAGTTGGATTACCCT
CTTGCATTGAAAAGCTTTTAAATTTAACAATAAGCGATCACTTTAGATGA
AAAATTTTCCAATACCTCTTCCAAGTTTGTAAATTTGTGAAGAAAATTTT
GAGGAAAACGATTTTTTGCTAACAAGCATATCGAGGATTTGGCCTTTTAC
GAGGGTTGCGTGCCCTCATGTAGAAGAAAAAATAAAAAACGATAAAAATA
GAAATTTTGCGGATTGCAAAAAAAATTTAAANTGCCTTTTTCGAGGGTTG
CGTGCCCTCATGTAGAAGAAAAAATAAAAAACGATAAAAATAGAAATTTT
GCGGATTGAAAAAAAAGTTCAAATTTTTCGCGGAAACTAATTTTCGCGGA
TGGGCCTTTTTCAAATTTCCAATGGGACTTATTTTCGCGGATGACACCCA
AATCCGCGAAATCCGCGAAAATTAATCCCCGCGAAAATTTATCCCATTAA
AGTAGTTTATCATTGGTCTAGTTCTTGATTGGCTGAGGACGTTAATAAAT
CTGCGCTTCAATCGGATTCATTTTCGCGGGATTTAATTCATTTTTGATAT
TTCGTGAAAATTAAACTCGCGAAATGAAGTGATCGATCAAAAGCGAGTAA
TAGTTTTTTTTTATTTGTCTAGTTCATGACTGATTGATGACGGTAGTAAA
TGATTGCTTTTACCATACTCAATTTCGGTGATTTGTTCCAAATCGATACA
GTCACAGCTCTTTAATCAAAAAATTTGATACATAATAAACTCTATAGTTA
GTCTTTATTAGCTGGTTTTCACTCAGCAAATGTCTACACAAAAATTGCAA
ATGAGGGGGGATAAGATATATTAAAACAAGAAAAACAAGTCTAAATTTGA
TGATAAATCTGTTAGTTCAATTACGCAAATCTTAAATAATCCATATAATG
TAATTTCCTCACCAGGGGTTTGTTTCTTCCAGTCTTCCAGTTCAAACTAA
ATCCCGTATTATTATTAGTATTGGTATTATTAGTATTACACGCATTATAA
ACGACTCCAGTCTATGTTAATTATCAATCATCTGTTATAGATGCAAGGGA
GCGACAGGAGGAATTGAACACCAGTATCCATGTAATCCCATCTACAAAGA
TCAATCTTCGACGGGCGCCAAACGATGCACGAAACTGACCAGAACACAAG
CAGCTTGCCGTTCAAGCTCAACTGAAATACGAGAACAGGTCAACTTTTTA
ACTTCTTTTATTGACGGGTCAGCTGTTTATGGAAGTTCGGATAAAAAAAT
GCAATTCCTGAGAACGAATGATGGTGAGTTGTTCCTCCTTTTTGTTGTTT
TTTTTACTTTTGCTCGAAGAAAGTTTTTTTACGTNGTTCCTCCTTGTCTT
TTTTTCTACTTTTGCTCGAAAATTTTTTTTGCGTTGAATGTTTTTTAGCT
AAATTACTAAGGGCATAAACAGTGTTTAAAATTTTCTCAGAATTTAATAA
TTCATTCGAAAGCGCTTTTAAAAACAACCATAGAGCAGTATGCTTTTCGA
CAAAATCGTCTTCATAAAAACGACAAAAACAATACGCGAATTTAGCCCTT
TTCGCAAATTTTAGCCCGTTTCGCGAAAGTAAATGTCTTCGAAAATTCTT
GGAAGGGCCGTGAAAGTTTTTGCTCGCCTAAAGAGTATATTGATGTATTT
TCTAATTCTTAGGATCAGGGAAATTGCGAACAACAACAGGCGATTTGTTG
CCTGAAGATGAATATAATAATGAACCGTGTAACAACGAAGGTTTCGAAGG
CTGCTTCGCTACAGGTGACAAACGAGGCTCCGAAAACCCCGCATTGGCTG
GCTTGCACACACTCTGGGTACGCGAACACAATCGTATTGCCACCGAGTTA
AAAGAACTGAACAAATATTGGAGTGGATCTAAGATTTTTTGGACGACGCG
TAAAATAGTGGCTGCGGAAATGCAAAATATCTTACTGAATGAATGGCTAC
CCATGCTATTTGATACAAACGACATTGACGGTTATGACACGGACGTCGAT
CCGTCAATCAGTAATGTCTTCGCGCATTCCGTTTTCCGATTCGGACATAC
ATTGGTACCCGATAAATTCCCACTTTACGATAACAATTTTAATCCGTATG
CCGCGAAACCAATACTGACACTGCGCGAAGGCTTTCATCATATCAACCCT
ATTAAGAATCATGGAATCGAACCCATCATGTACGGGTTAATCGGTAACGA
ATCGGAGACTTTCGATACCAAATTCGCACAAGCTATCTCCCGCCATTTGT
TCATTCCTCTTGGTGAAGGTGGTTTGGCGGATCTCACAGCTATCAATATT
CACCGTGGGCGTGATCACGGTTTACCGCCCTACAATGAATGGCGTCAATT
TTGTGGTTTTTCAAAACTTAAAGACTGGGACGACTTGAATGGAGATATGG
AAAGCGAAACGATTAAAAATTTGAAGAAAGTTTACACCTCTGTTGAAGAA
ATCGATATTTTTGTTGGCGGGATCGGTGAAAAACCGGTACACGAAAAAGT
GATCGGAAAAACATTCGGCTGTATCATGAAGAAGCAATTCAAGGATCTTT
TCAAAGGTGATCGGTACTTTTACACCAACTACGTTTTCGACTATCCACAA
ACTACTTCTATAGGGAAAGTGACCATGAGACAGGTTTTGTGTGATAATTT
GAAAGGTGTGGTCTCACTACATGCGAACCCATTCGTACCCTTCGATGATG
GTTACCACACAAGACATGCTTGTCAAACAGACTACAGAGATCCACATTAT
GAAGGAGCTAATTTGGACCTCTGGAAAGACATCACTTATTAATTAAATTT
TATTTTTAATTGAGTTAGGATAGATTAACTCTGAGTTTGGTTGTAAAGTG
TAAAATGCGTCGCTTATCGAGCCCCCCCCCCAGCGGTTTGTGTGATGGCG

Coding sequence (CDS) from alignment at scaffold_355:88105..93854-

>TCONS_00061292 ID=TCONS_00061292|Name=TCONS_00061292|organism=Clytia hemisphaerica|type=CDS|length=9270bp|location=Sequence derived from alignment at scaffold_355:88105..93854- (Clytia hemisphaerica)
GATCAGGGAAATTGCGAACAACAACAGGCGATTTGTTGCCTGAAGATGAA
TATAATAATGAACCGTGTAACAACGAAGGTTTCGAAGGCTGCTTCGCTAC
AGGTGACAAACGAGGCTCCGAAAACCCCGCATTGGCTGGCTTGCACACAC
TCTGGGTACGCGAACACAATCGTATTGCCACCGAGTTAAAAGAACTGAAC
AAATATTGGAGTGGATCTAAGATTTTTTGGACGACGCGTAAAATAGTGGC
TGCGGAAATGCAAAATATCTTACTGAATGAATGGCTACCCATGCTATTTG
ATACAAACGACATTGACGGTTATGACACGGACGTCGATCCGTCAATCAGT
AATGTCTTCGCGCATTCCGTTTTCCGATTCGGACATACATTGGTACCCGA
TAAATTCCCACTTTACGATAACAATTTTAATCCGTATGCCGCGAAACCAA
TACTGACACTGCGCGAAGGCTTTCATCATATCAACCCTATTAAGAATCAT
GGAATCGAACCCATCATGTACGGGTTAATCGGTAACGAATCGGAGACTTT
CGATACCAAATTCGCACAAGCTATCTCCCGCCATTTGTTCATTCCTCTTG
GTGAAGGTGGTTTGGCGGATCTCACAGCTATCAATATTCACCGTGGGCGT
GATCACGGTTTACCGCCCTACAATGAATGGCGTCAATTTTGTGGTTTTTC
AAAACTTAAAGACTGGGACGACTTGAATGGAGATATGGAAAGCGAAACGA
TTAAAAATTTGAAGAAAGTTTACACCTCTGTTGAAGAAATCGATATTTTT
GTTGGCGGGATCGGTGAAAAACCGGTACACGAAAAAGTGATCGGAAAAAC
ATTCGGCTGTATCATGAAGAAGCAATTCAAGGATCTTTTCAAAGGTGATC
GGTACTTTTACACCAACTACGTTTTCGACTATCCACAAACTACTTCTATA
GGGAAAGTGACCATGAGACAGGTTTTGTGTGATAATTTGAAAGGTGTGGT
CTCACTACATGCGAACCCATTCGTACCCTTCGATGATGGTTACCACACAA
GACATGCTTGTCAAACAGACTACAGAGATCCACATTATGAAGGAGCTAAT
TTGGACCTCTGGAAAGACATCACTTATTAAATGCAAGGGAGCGACAGGAG
GAATTGAACACCAGTATCCATGTAATCCCATCTACAAAGATCAATCTTCG
ACGGGCGCCAAACGATGCACGAAACTGACCAGAACACAAGCAGCTTGCCG
TTCAAGCTCAACTGAAATACGAGAACAGGTCAACTTTTTAACTTCTTTTA
TTGACGGGTCAGCTGTTTATGGAAGTTCGGATAAAAAAATGCAATTCCTG
AGAACGAATGATGCTGCGCAATATTTGGTCGGAACAACGGGTTATCCACG
TGGCTTTCCGCCAAACAGTAACATGAAGTCTGGGCACGAGGTTGCCCGTA
AAGCCTTCCAATCAGTTGAAAAGTTTGAAGGGAACAACAATCAACCTCAC
AAAACATCCATCTTGTTCATGACTTTTGGACAATTCATTGATCACGATAT
CACAGGAACAGATAAAGCTCCCACGGGCGGTTGTGATGTGACGTGATCCT
TACCAAGATTGTGTCGATGTCAACGTATGTTATAATTGTCGAGGAACTGG
AGGACGTGATCAATTCCAAACTATGGATGGATCCTGCAACAATCTGGCAA
ACCCATCTTATGGCGCTGCTCCCACAAAACACAAACGATACTTGCATGGT
TTCACCAAAGCTGCTCATTACCATCTTTCTGATGTTCTTCTGTATCAACA
AATGCGCACCATCAACGCTCCCTGTTTCTGACAGCACATTGGACGCTAAA
TATGGATCAGGGAAATTGCGAACAACAACAGGCGATTTGTTGCCTGAAGA
TGAATATAATAATGAACCGTGTAACAACGAAGGTTTCGAAGGCTGCTTCG
CTACAGGTGACAAACGAGGCTCCGAAAACCCCGCATTGGCTGGCTTGCAC
ACACTCTGGGTACGCGAACACAATCGTATTGCCACCGAGTTAAAAGAACT
GAACAAATATTGGAGTGGATCTAAGATTTTTTGGACGACGCGTAAAATAG
TGGCTGCGGAAATGCAAAATATCTTACTGAATGAATGGCTACCCATGCTA
TTTGATACAAACGACATTGACGGTTATGACACGGACGTCGATCCGTCAAT
CAGTAATGTCTTCGCGCATTCCGTTTTCCGATTCGGACATACATTGGTAC
CCGATAAATTCCCACTTTACGATAACAATTTTAATCCGTATGCCGCGAAA
CCAATACTGACACTGCGCGAAGGCTTTCATCATATCAACCCTATTAAGAA
TCATGGAATCGAACCCATCATGTACGGGTTAATCGGTAACGAATCGGAGA
CTTTCGATACCAAATTCGCACAAGCTATCTCCCGCCATTTGTTCATTCCT
CTTGGTGAAGGTGGTTTGGCGGATCTCACAGCTATCAATATTCACCGTGG
GCGTGATCACGGTTTACCGCCCTACAATGAATGGCGTCAATTTTGTGGTT
TTTCAAAACTTAAAGACTGGGACGACTTGAATGGAGATATGGAAAGCGAA
ACGATTAAAAATTTGAAGAAAGTTTACACCTCTGTTGAAGAAATCGATAT
TTTTGTTGGCGGGATCGGTGAAAAACCGGTACACGAAAAAGTGATCGGAA
AAACATTCGGCTGTATCATGAAGAAGCAATTCAAGGATCTTTTCAAAGGT
GATCGGTACTTTTACACCAACTACGTTTTCGACTATCCACAAACTACTTC
TATAGGGAAAGTGACCATGAGACAGGTTTTGTGTGATAATTTGAAAGGTG
TGGTCTCACTACATGCGAACCCATTCGTACCCTTCGATGATGGTTACCAC
ACAAGACATGCTTGTCAAACAGACTACAGAGATCCACATTATGAAGGAGC
TAATTTGGACCTCTGGAAAGACATCACTTATTAAATGCAAGGGAGCGACA
GGAGGAATTGAACACCAGTATCCATGTAATCCCATCTACAAAGATCAATC
TTCGACGGGCGCCAAACGATGCACGAAACTGACCAGAACACAAGCAGCTT
GCCGTTCAAGCTCAACTGAAATACGAGAACAGGTCAACTTTTTAACTTCT
TTTATTGACGGGTCAGCTGTTTATGGAAGTTCGGATAAAAAAATGCAATT
CCTGAGAACGAATGATGCTGCGCAATATTTGGTCGGAACAACGGGTTATC
CACGTGGCTTTCCGCCAAACAGTAACATGAAGTCTGGGCACGAGGTTGCC
CGTAAAGCCTTCCAATCAGTTGAAAAGTTTGAAGGGAACAACAATCAACC
TCACAAAACATCCATCTTGTTCATGACTTTTGGACAATTCATTGATCACG
ATATCACAGGAACAGATAAAGCTCCCACGGGCGGTTGTGATGTGACGTGA
TCCTTACCAAGATTGTGTCGATGTCAACGTATGTTATAATTGTCGAGGAA
CTGGAGGACGTGATCAATTCCAAACTATGGATGGATCCTGCAACAATCTG
GCAAACCCATCTTATGGCGCTGCTCCCACAAAACACAAACGATACTTGCA
TGGTTTCACCAAAGCTGCTCATTACCATCTTTCTGATGTTCTTCTGTATC
AACAAATGCGCACCATCAACGCTCCCTGTTTCTGACAGCACATTGGACGC
TAAATATGGATCAGGGAAATTGCGAACAACAACAGGCGATTTGTTGCCTG
AAGATGAATATAATAATGAACCGTGTAACAACGAAGGTTTCGAAGGCTGC
TTCGCTACAGGTGACAAACGAGGCTCCGAAAACCCCGCATTGGCTGGCTT
GCACACACTCTGGGTACGCGAACACAATCGTATTGCCACCGAGTTAAAAG
AACTGAACAAATATTGGAGTGGATCTAAGATTTTTTGGACGACGCGTAAA
ATAGTGGCTGCGGAAATGCAAAATATCTTACTGAATGAATGGCTACCCAT
GCTATTTGATACAAACGACATTGACGGTTATGACACGGACGTCGATCCGT
CAATCAGTAATGTCTTCGCGCATTCCGTTTTCCGATTCGGACATACATTG
GTACCCGATAAATTCCCACTTTACGATAACAATTTTAATCCGTATGCCGC
GAAACCAATACTGACACTGCGCGAAGGCTTTCATCATATCAACCCTATTA
AGAATCATGGAATCGAACCCATCATGTACGGGTTAATCGGTAACGAATCG
GAGACTTTCGATACCAAATTCGCACAAGCTATCTCCCGCCATTTGTTCAT
TCCTCTTGGTGAAGGTGGTTTGGCGGATCTCACAGCTATCAATATTCACC
GTGGGCGTGATCACGGTTTACCGCCCTACAATGAATGGCGTCAATTTTGT
GGTTTTTCAAAACTTAAAGACTGGGACGACTTGAATGGAGATATGGAAAG
CGAAACGATTAAAAATTTGAAGAAAGTTTACACCTCTGTTGAAGAAATCG
ATATTTTTGTTGGCGGGATCGGTGAAAAACCGGTACACGAAAAAGTGATC
GGAAAAACATTCGGCTGTATCATGAAGAAGCAATTCAAGGATCTTTTCAA
AGGTGATCGGTACTTTTACACCAACTACGTTTTCGACTATCCACAAACTA
CTTCTATAGGGAAAGTGACCATGAGACAGGTTTTGTGTGATAATTTGAAA
GGTGTGGTCTCACTACATGCGAACCCATTCGTACCCTTCGATGATGGTTA
CCACACAAGACATGCTTGTCAAACAGACTACAGAGATCCACATTATGAAG
GAGCTAATTTGGACCTCTGGAAAGACATCACTTATTAAATGCAAGGGAGC
GACAGGAGGAATTGAACACCAGTATCCATGTAATCCCATCTACAAAGATC
AATCTTCGACGGGCGCCAAACGATGCACGAAACTGACCAGAACACAAGCA
GCTTGCCGTTCAAGCTCAACTGAAATACGAGAACAGGTCAACTTTTTAAC
TTCTTTTATTGACGGGTCAGCTGTTTATGGAAGTTCGGATAAAAAAATGC
AATTCCTGAGAACGAATGATGCTGCGCAATATTTGGTCGGAACAACGGGT
TATCCACGTGGCTTTCCGCCAAACAGTAACATGAAGTCTGGGCACGAGGT
TGCCCGTAAAGCCTTCCAATCAGTTGAAAAGTTTGAAGGGAACAACAATC
AACCTCACAAAACATCCATCTTGTTCATGACTTTTGGACAATTCATTGAT
CACGATATCACAGGAACAGATAAAGCTCCCACGGGCGGTTGTGATGTGAC
GTGATCCTTACCAAGATTGTGTCGATGTCAACGTATGTTATAATTGTCGA
GGAACTGGAGGACGTGATCAATTCCAAACTATGGATGGATCCTGCAACAA
TCTGGCAAACCCATCTTATGGCGCTGCTCCCACAAAACACAAACGATACT
TGCATGGTTTCACCAAAGCTGCTCATTACCATCTTTCTGATGTTCTTCTG
TATCAACAAATGCGCACCATCAACGCTCCCTGTTTCTGACAGCACATTGG
ACGCTAAATATGGATCAGGGAAATTGCGAACAACAACAGGCGATTTGTTG
CCTGAAGATGAATATAATAATGAACCGTGTAACAACGAAGGTTTCGAAGG
CTGCTTCGCTACAGGTGACAAACGAGGCTCCGAAAACCCCGCATTGGCTG
GCTTGCACACACTCTGGGTACGCGAACACAATCGTATTGCCACCGAGTTA
AAAGAACTGAACAAATATTGGAGTGGATCTAAGATTTTTTGGACGACGCG
TAAAATAGTGGCTGCGGAAATGCAAAATATCTTACTGAATGAATGGCTAC
CCATGCTATTTGATACAAACGACATTGACGGTTATGACACGGACGTCGAT
CCGTCAATCAGTAATGTCTTCGCGCATTCCGTTTTCCGATTCGGACATAC
ATTGGTACCCGATAAATTCCCACTTTACGATAACAATTTTAATCCGTATG
CCGCGAAACCAATACTGACACTGCGCGAAGGCTTTCATCATATCAACCCT
ATTAAGAATCATGGAATCGAACCCATCATGTACGGGTTAATCGGTAACGA
ATCGGAGACTTTCGATACCAAATTCGCACAAGCTATCTCCCGCCATTTGT
TCATTCCTCTTGGTGAAGGTGGTTTGGCGGATCTCACAGCTATCAATATT
CACCGTGGGCGTGATCACGGTTTACCGCCCTACAATGAATGGCGTCAATT
TTGTGGTTTTTCAAAACTTAAAGACTGGGACGACTTGAATGGAGATATGG
AAAGCGAAACGATTAAAAATTTGAAGAAAGTTTACACCTCTGTTGAAGAA
ATCGATATTTTTGTTGGCGGGATCGGTGAAAAACCGGTACACGAAAAAGT
GATCGGAAAAACATTCGGCTGTATCATGAAGAAGCAATTCAAGGATCTTT
TCAAAGGTGATCGGTACTTTTACACCAACTACGTTTTCGACTATCCACAA
ACTACTTCTATAGGGAAAGTGACCATGAGACAGGTTTTGTGTGATAATTT
GAAAGGTGTGGTCTCACTACATGCGAACCCATTCGTACCCTTCGATGATG
GTTACCACACAAGACATGCTTGTCAAACAGACTACAGAGATCCACATTAT
GAAGGAGCTAATTTGGACCTCTGGAAAGACATCACTTATTAAATGCAAGG
GAGCGACAGGAGGAATTGAACACCAGTATCCATGTAATCCCATCTACAAA
GATCAATCTTCGACGGGCGCCAAACGATGCACGAAACTGACCAGAACACA
AGCAGCTTGCCGTTCAAGCTCAACTGAAATACGAGAACAGGTCAACTTTT
TAACTTCTTTTATTGACGGGTCAGCTGTTTATGGAAGTTCGGATAAAAAA
ATGCAATTCCTGAGAACGAATGATGCTGCGCAATATTTGGTCGGAACAAC
GGGTTATCCACGTGGCTTTCCGCCAAACAGTAACATGAAGTCTGGGCACG
AGGTTGCCCGTAAAGCCTTCCAATCAGTTGAAAAGTTTGAAGGGAACAAC
AATCAACCTCACAAAACATCCATCTTGTTCATGACTTTTGGACAATTCAT
TGATCACGATATCACAGGAACAGATAAAGCTCCCACGGGCGGTTGTGATG
TGACGTGATCCTTACCAAGATTGTGTCGATGTCAACGTATGTTATAATTG
TCGAGGAACTGGAGGACGTGATCAATTCCAAACTATGGATGGATCCTGCA
ACAATCTGGCAAACCCATCTTATGGCGCTGCTCCCACAAAACACAAACGA
TACTTGCATGGTTTCACCAAAGCTGCTCATTACCATCTTTCTGATGTTCT
TCTGTATCAACAAATGCGCACCATCAACGCTCCCTGTTTCTGACAGCACA
TTGGACGCTAAATATGGATCAGGGAAATTGCGAACAACAACAGGCGATTT
GTTGCCTGAAGATGAATATAATAATGAACCGTGTAACAACGAAGGTTTCG
AAGGCTGCTTCGCTACAGGTGACAAACGAGGCTCCGAAAACCCCGCATTG
GCTGGCTTGCACACACTCTGGGTACGCGAACACAATCGTATTGCCACCGA
GTTAAAAGAACTGAACAAATATTGGAGTGGATCTAAGATTTTTTGGACGA
CGCGTAAAATAGTGGCTGCGGAAATGCAAAATATCTTACTGAATGAATGG
CTACCCATGCTATTTGATACAAACGACATTGACGGTTATGACACGGACGT
CGATCCGTCAATCAGTAATGTCTTCGCGCATTCCGTTTTCCGATTCGGAC
ATACATTGGTACCCGATAAATTCCCACTTTACGATAACAATTTTAATCCG
TATGCCGCGAAACCAATACTGACACTGCGCGAAGGCTTTCATCATATCAA
CCCTATTAAGAATCATGGAATCGAACCCATCATGTACGGGTTAATCGGTA
ACGAATCGGAGACTTTCGATACCAAATTCGCACAAGCTATCTCCCGCCAT
TTGTTCATTCCTCTTGGTGAAGGTGGTTTGGCGGATCTCACAGCTATCAA
TATTCACCGTGGGCGTGATCACGGTTTACCGCCCTACAATGAATGGCGTC
AATTTTGTGGTTTTTCAAAACTTAAAGACTGGGACGACTTGAATGGAGAT
ATGGAAAGCGAAACGATTAAAAATTTGAAGAAAGTTTACACCTCTGTTGA
AGAAATCGATATTTTTGTTGGCGGGATCGGTGAAAAACCGGTACACGAAA
AAGTGATCGGAAAAACATTCGGCTGTATCATGAAGAAGCAATTCAAGGAT
CTTTTCAAAGGTGATCGGTACTTTTACACCAACTACGTTTTCGACTATCC
ACAAACTACTTCTATAGGGAAAGTGACCATGAGACAGGTTTTGTGTGATA
ATTTGAAAGGTGTGGTCTCACTACATGCGAACCCATTCGTACCCTTCGAT
GATGGTTACCACACAAGACATGCTTGTCAAACAGACTACAGAGATCCACA
TTATGAAGGAGCTAATTTGGACCTCTGGAAAGACATCACTTATTAAATGC
AAGGGAGCGACAGGAGGAATTGAACACCAGTATCCATGTAATCCCATCTA
CAAAGATCAATCTTCGACGGGCGCCAAACGATGCACGAAACTGACCAGAA
CACAAGCAGCTTGCCGTTCAAGCTCAACTGAAATACGAGAACAGGTCAAC
TTTTTAACTTCTTTTATTGACGGGTCAGCTGTTTATGGAAGTTCGGATAA
AAAAATGCAATTCCTGAGAACGAATGATGCTGCGCAATATTTGGTCGGAA
CAACGGGTTATCCACGTGGCTTTCCGCCAAACAGTAACATGAAGTCTGGG
CACGAGGTTGCCCGTAAAGCCTTCCAATCAGTTGAAAAGTTTGAAGGGAA
CAACAATCAACCTCACAAAACATCCATCTTGTTCATGACTTTTGGACAAT
TCATTGATCACGATATCACAGGAACAGATAAAGCTCCCACGGGCGGTTGT
GATGTGACGTGATCCTTACCAAGATTGTGTCGATGTCAACGTATGTTATA
ATTGTCGAGGAACTGGAGGACGTGATCAATTCCAAACTATGGATGGATCC
TGCAACAATCTGGCAAACCCATCTTATGGCGCTGCTCCCACAAAACACAA
ACGATACTTGCATGGTTTCACCAAAGCTGCTCATTACCATCTTTCTGATG
TTCTTCTGTATCAACAAATGCGCACCATCAACGCTCCCTGTTTCTGACAG
CACATTGGACGCTAAATATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038457XLOC_038457Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061292-exon-scaffold_355-1575043694:93615..93854TCONS_00061292-exon-scaffold_355-1575043694:93615..93854Clytia hemisphaericaexon
TCONS_00061292-exon-scaffold_355-1575043694:92797..92949TCONS_00061292-exon-scaffold_355-1575043694:92797..92949Clytia hemisphaericaexon
TCONS_00061292-exon-scaffold_355-1575043694:91757..91985TCONS_00061292-exon-scaffold_355-1575043694:91757..91985Clytia hemisphaericaexon
TCONS_00061292-exon-scaffold_355-1575043694:89732..89964TCONS_00061292-exon-scaffold_355-1575043694:89732..89964Clytia hemisphaericaexon
TCONS_00061292-exon-scaffold_355-1575043694:88105..89342TCONS_00061292-exon-scaffold_355-1575043694:88105..89342Clytia hemisphaericaexon
TCONS_00061292-exon-scaffold_355-1510915933:93615..93854TCONS_00061292-exon-scaffold_355-1510915933:93615..93854Clytia hemisphaericaexon
TCONS_00061292-exon-scaffold_355-1510915933:92797..92949TCONS_00061292-exon-scaffold_355-1510915933:92797..92949Clytia hemisphaericaexon
TCONS_00061292-exon-scaffold_355-1510915933:91757..91985TCONS_00061292-exon-scaffold_355-1510915933:91757..91985Clytia hemisphaericaexon
TCONS_00061292-exon-scaffold_355-1510915933:89732..89964TCONS_00061292-exon-scaffold_355-1510915933:89732..89964Clytia hemisphaericaexon
TCONS_00061292-exon-scaffold_355-1510915933:88105..89342TCONS_00061292-exon-scaffold_355-1510915933:88105..89342Clytia hemisphaericaexon
TCONS_00061292-exon-scaffold_355-1491911889:93615..93854TCONS_00061292-exon-scaffold_355-1491911889:93615..93854Clytia hemisphaericaexon
TCONS_00061292-exon-scaffold_355-1491911889:92797..92949TCONS_00061292-exon-scaffold_355-1491911889:92797..92949Clytia hemisphaericaexon
TCONS_00061292-exon-scaffold_355-1491911889:91757..91985TCONS_00061292-exon-scaffold_355-1491911889:91757..91985Clytia hemisphaericaexon
TCONS_00061292-exon-scaffold_355-1491911889:89732..89964TCONS_00061292-exon-scaffold_355-1491911889:89732..89964Clytia hemisphaericaexon
TCONS_00061292-exon-scaffold_355-1491911889:88105..89342TCONS_00061292-exon-scaffold_355-1491911889:88105..89342Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061292-proteinTCONS_00061292-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_355supercontigscaffold_355:88105..93854 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.80778	2.01996	0.959468	0.959549	1.85382	1.44484	2.42103	3.12783	17.4554	12.0097	11.4852	53.5267	10.708	4.13599	90.9539	19.4044	1.2016	1.65179	0.540482	0.502734	0.983175	0.825906	2.54778	2.55186	3.39664	3.24795	0.67135	0.606254	2.0065	2.02301
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR019791Haem_peroxidase_animal
IPR010255Haem_peroxidase
Vocabulary: Biological Process
TermDefinition
GO:0006979response to oxidative stress
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO:0004601peroxidase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006979 response to oxidative stress
molecular_function GO:0020037 heme binding
molecular_function GO:0004601 peroxidase activity
Blast
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BLAST of TCONS_00061292 vs. Swiss-Prot (Human)
Match: PERM (Myeloperoxidase OS=Homo sapiens GN=MPO PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 2.004e-85
Identity = 189/583 (32.42%), Postives = 285/583 (48.89%), Query Frame = 3 
Query:  207 PVSDSTLDAKYGDPYQDCVDVNVCYNCRGTGGRDQFQTMDGSCNNLANPSYGAAPTKHKRYLPAQYLVGTTGYPRGFPPNSNMKSGHEVA--RKAFQSVEKFEGNNNQP-HKTSILFMTFGQFIDHDITGTDKAPTGGCDVTCKGATGGIEHQYPCNPIY---KDQSSTGAKRCTKLTRTQAACRSSSTEIREQVNFLTSFIDGSAVYGSSDKKMQFLRTNDGSGKLRTTTGD-------LLPEDEYNNEPC---NNEGFEGCFATGDKRGSENPALAGLHTLWVREHNRIATELKELNKYWSGSKIFWTTRKIVAAEMQNILLNEWLPMLFDTNDI-------DGYDTDVDPSISNVFAHSVFRFGHTLVPDKFPLYDNNFNPYAAKPILTL-REGFHHINPIKNHGIEPIMYGLIGNESET--FDTKFAQAISRHLFIPLGEGGLADLTAINIHRGRDHGLPPYNEWRQFCGFSKLKDWDDLNGDMESETI-KNLKKVYTSVEEIDIFVGGIGEKPVHEKVIGKTFGCIMKKQFKDLFKGDRYFYTNY-VFDYPQTTSIGKVTMRQVLCDNLKGVVSLHAN 1871
            P   + L    G  YQD     V   C     +D+++T+ G CNN  +P+ GA+     R+LPA+Y  G +  P G+ P    ++G  VA  R     + +F  +   P  + S++FM +GQ +DHD+  T +       VT          Q PC P+     D        C    R+  AC  S+  IR Q+N LTSF+D S VYGS +   + LR       L             LLP D  +++PC   N      CF  GD R SE P L  +HTL +REHNR+ATELK LN  W G +++   RKIV A +Q I   ++LP++     +         Y+  VDP I+NVF ++ FR+GHTL+       DN + P    P + L R  F     +   GI+PI+ GL+   ++    +      I   LF  +   GL DL A+N+ R RDHGLP YN WR+FCG  + +    L   + +  + + L + Y +   IDI++GG+ E    +  +G    CI+  QF+ L  GDR+++ N  VF   Q  ++ ++++ +++CDN  G+ ++  N
Sbjct:  146 PAQLNVLSKSSGCAYQD-----VGVTC---PEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFS-LPYGWTPGVK-RNGFPVALARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAARASFVTGVNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNA-FRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGL-DLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDN-TGITTVSKN 715
The following BLAST results are available for this feature:
BLAST of TCONS_00061292 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PERM2.004e-8532.42Myeloperoxidase OS=Homo sapiens GN=MPO PE=1 SV=1[more]
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