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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061289 ID=TCONS_00061289|Name=TCONS_00061289|organism=Clytia hemisphaerica|type=transcript|length=151bp
GAAAAATATTacttaaaaatttagaaatgacGATGTGAGTATTGTTAAAG
AAAATGGCAGATAATGAAGAAAGAGCGCGCTCAAGAAGAGCATCTCGTAG
ACGAAGTTGTTTGAAGACAATTGTTGGAAATCAACAGGATGACACCACTG
G Run BLAST on NCBI transcript from alignment at scaffold_355:2807..3706- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061289 ID=TCONS_00061289|Name=TCONS_00061289|organism=Clytia hemisphaerica|type=transcript|length=900bp|location=Sequence derived from alignment at scaffold_355:2807..3706- (Clytia hemisphaerica)
GAAAAATATTACTTAAAAATTTAGAAATGACGATGTGAGTATTGTTAAAG
AAAATGGCAGATAATGAAGAAAGGTATACAACTTTTATTTGATTCAGTTG
ATACGTTCCTGTATTTGCTTAAAAATTAATGATACCCAATAAATGCCCCT
ACTGAAACTGAGAACTCATTTTTCCTTGTCAACATCAATTTTCAGGTACA
TAGGTCCATTCAACATGTAGCTTGTTTTTCTTATTTGTTTTGTCCATCCA
TTTTAGAGCGCGCTCAAGAAGAGCATCTCGTAGACGAAGTGTAAGTTCTT
TTCTATTCAATTTTTTCTGATTTATTAGATTTATACACAATATACTTCTA
AATTAGGAGAGAACGAAGGAAGTGACAAAATCAAACTTAATTTTTCTTTT
TACTTTGTTAGACCTGAGACTTTGATTGCTTTGTTTTAGTGCTACACCTA
CTCTGTCAGCGCTCAGTTACCTATTGCCTATCCAAGCTACTCGTTCTCTG
ATTTATGGAACCTAACACCTTTGAATTGAAAGATGAAGGCTCTACCAATT
TGTATAATATACATTTTAGATCTGAGTCAGTCTATTATATAAAACTATCT
TTGATTTTTGTAGTGTTTGAAGACAATTGTTGGAAATCAACAGGTAATGT
TTGATTTTTCGCCGTTTCTATTTGACTTTTAATATAACCATACTTGGTTT
GGGCTATACATGCCTCCTTTTCATGAGATAAATTAGAAGATTTGCAGCAT
AATACATTCTAATAGCAACATTTTGCTAATGTTGTAGTCGAAGTTCTATA
AAAATAAAATATTAAACATTAGAAGCATAAAAGTGACTTTTGGAAAAGTA
CAATCACTAACAAACAATATTTTCTCCCATTTTTAGGATGACACCACTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061289-exon-scaffold_355-1575043694:3634..3706 | TCONS_00061289-exon-scaffold_355-1575043694:3634..3706 | Clytia hemisphaerica | exon |
| TCONS_00061289-exon-scaffold_355-1575043694:3417..3450 | TCONS_00061289-exon-scaffold_355-1575043694:3417..3450 | Clytia hemisphaerica | exon |
| TCONS_00061289-exon-scaffold_355-1575043694:3064..3093 | TCONS_00061289-exon-scaffold_355-1575043694:3064..3093 | Clytia hemisphaerica | exon |
| TCONS_00061289-exon-scaffold_355-1575043694:2807..2820 | TCONS_00061289-exon-scaffold_355-1575043694:2807..2820 | Clytia hemisphaerica | exon |
| TCONS_00061289-exon-scaffold_355-1510915933:3634..3706 | TCONS_00061289-exon-scaffold_355-1510915933:3634..3706 | Clytia hemisphaerica | exon |
| TCONS_00061289-exon-scaffold_355-1510915933:3417..3450 | TCONS_00061289-exon-scaffold_355-1510915933:3417..3450 | Clytia hemisphaerica | exon |
| TCONS_00061289-exon-scaffold_355-1510915933:3064..3093 | TCONS_00061289-exon-scaffold_355-1510915933:3064..3093 | Clytia hemisphaerica | exon |
| TCONS_00061289-exon-scaffold_355-1510915933:2807..2820 | TCONS_00061289-exon-scaffold_355-1510915933:2807..2820 | Clytia hemisphaerica | exon |
| TCONS_00061289-exon-scaffold_355-1491911889:3634..3706 | TCONS_00061289-exon-scaffold_355-1491911889:3634..3706 | Clytia hemisphaerica | exon |
| TCONS_00061289-exon-scaffold_355-1491911889:3417..3450 | TCONS_00061289-exon-scaffold_355-1491911889:3417..3450 | Clytia hemisphaerica | exon |
| TCONS_00061289-exon-scaffold_355-1491911889:3064..3093 | TCONS_00061289-exon-scaffold_355-1491911889:3064..3093 | Clytia hemisphaerica | exon |
| TCONS_00061289-exon-scaffold_355-1491911889:2807..2820 | TCONS_00061289-exon-scaffold_355-1491911889:2807..2820 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_355 | supercontig | scaffold_355:2807..3706 - |
Blast
The following BLAST results are available for this feature:
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