|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061288 ID=TCONS_00061288|Name=TCONS_00061288|organism=Clytia hemisphaerica|type=transcript|length=118bp
CATAGATCAACAAATCTCCAACCAAGGCGGAAAAGTAAAAGAGTTAGTTT
TGACCATTACAGGAGTGTGAAgatttttgaaaaagacagCCATGAAAAAG
aTGAAGAGGATGAAAAGG Run BLAST on NCBI transcript from alignment at scaffold_355:757..2285- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061288 ID=TCONS_00061288|Name=TCONS_00061288|organism=Clytia hemisphaerica|type=transcript|length=1529bp|location=Sequence derived from alignment at scaffold_355:757..2285- (Clytia hemisphaerica)
CATAGATCAACAAATCTCCAACCAAGGCGGAAAAGTAAAAGAGTTAGTTT
TGACCATTACAGGAGTGTGAAGTAAGCTATATTCATTCAACCCTGGTTCC
CTCAGAAGAGTTCATTTACAATGCTTAATGGAACTTGAAAAGTTTTGTTT
CATGACAGTTGAGGGAAAATATTTCTTGAGCAGTCCTGTGCGATATATTA
TAAAGACCGCTCTGGTCTGCATTTTATTCATTTTGTATAGAGCCTTATAT
TGAAAGATCAGTTTTTACACCTGACTTCGTGCAGTAAACATGCCACTTTG
TTACATCCTGAATAGGTTTTTCCAAAAAAACTTCACTTTTCAACTTTTTA
TTATAATATCTAGCAACTTTGAGAAAATGTTTTTTCGTGTCATGTTTCTA
TTCTTATTTCCTGTAGCTTGCATTTGTTACAGTTACTTTAACTAATTTTT
TCCAATTATTTACAGGATTTTTGAAAAAGACAGCCATGAAAAAGGTGTGT
CTCGGTTTTTCATTTCAAGTGCTGGATTTTTCTTTTACTCTCAGGTACCT
AATAGCCGTCCCCCCAATTAATTTTTTGAAAATTATCAACCCAGGACATT
CTTATTCCAACCCCCGCTTATTAATTTTTGGGAAAATGTTTTTGAAAGTT
CCCTCTTTTGTCCTAATTTTTGCTTTATTAGACTCCTTTACAAAAATTTT
CCACCCAGAACATTTTTATTCTAAAAAGGGGGCCCCCCTGCCCGCTTTTT
TAAGACTTACTACTTTAACCAGATTAAATTTCGCGAGATTAAATTTCGCG
AGCTAAAAAATTGCGAAATTTTCTGGATTTAATTTCGCGAGTCCGAGTTT
TAAAATATTTCGCGTGGATTTAATTTCCCGAATAAGCCAGAAAACAGCTG
AAAATAGCCATTTTTTGCCATAAATGGAGACTTGGAACTAGTTTCTCCCC
CAAAAATACAATTTTAAAAGTTTTGTGGTGGATTTAATTTCGCGAATCAG
GAATCTCACGCGTGTTCGCGAGTTTTAATTTCGCAAAAATGGGANGAATC
AGGAATCTCACGCGTGCTCGCAAGTTTTAATTTTGCGAAAATGGGAAAAA
TTTGCGAAATCGCGAAATTTAATCTCGTGAAAATTAATCCGATTAAAGTA
CCCATTAATTCAATTTGAGAAACCGTTAGCAATAGATTTAGTTTTTTATA
TCATACTCAATAAAAATTCAAAACAAACTAAACATTTTTCCATCATTAAG
CTAAAAACATACTTTAGGCTATGTCATATCTTTCTTCGTTTCGAACGTAT
CCTATAAGTAGGTGAAATCTCGGTGGGGTGACTAGTGGCCAACCCATAGC
AGTGCCTATAGACCAAGAGTAAGGCCTAAAAGCCTGGAACTGTCTATTGT
GTAGACTAACACACCTGAACTAATTGACAATTGTTGTTTTGTTTACTTTT
AGATNTTGTGTACACTAAAACACCTGAACTAATTGACAATTGTTGTTTTG
TTTACTTTTAGATGAAGAGGATGAAAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061288-exon-scaffold_355-1575043694:2215..2285 | TCONS_00061288-exon-scaffold_355-1575043694:2215..2285 | Clytia hemisphaerica | exon |
| TCONS_00061288-exon-scaffold_355-1575043694:1792..1820 | TCONS_00061288-exon-scaffold_355-1575043694:1792..1820 | Clytia hemisphaerica | exon |
| TCONS_00061288-exon-scaffold_355-1575043694:757..774 | TCONS_00061288-exon-scaffold_355-1575043694:757..774 | Clytia hemisphaerica | exon |
| TCONS_00061288-exon-scaffold_355-1510915933:2215..2285 | TCONS_00061288-exon-scaffold_355-1510915933:2215..2285 | Clytia hemisphaerica | exon |
| TCONS_00061288-exon-scaffold_355-1510915933:1792..1820 | TCONS_00061288-exon-scaffold_355-1510915933:1792..1820 | Clytia hemisphaerica | exon |
| TCONS_00061288-exon-scaffold_355-1510915933:757..774 | TCONS_00061288-exon-scaffold_355-1510915933:757..774 | Clytia hemisphaerica | exon |
| TCONS_00061288-exon-scaffold_355-1491911889:2215..2285 | TCONS_00061288-exon-scaffold_355-1491911889:2215..2285 | Clytia hemisphaerica | exon |
| TCONS_00061288-exon-scaffold_355-1491911889:1792..1820 | TCONS_00061288-exon-scaffold_355-1491911889:1792..1820 | Clytia hemisphaerica | exon |
| TCONS_00061288-exon-scaffold_355-1491911889:757..774 | TCONS_00061288-exon-scaffold_355-1491911889:757..774 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_355 | supercontig | scaffold_355:757..2285 - |
Blast
The following BLAST results are available for this feature:
|
