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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061271 ID=TCONS_00061271|Name=TCONS_00061271|organism=Clytia hemisphaerica|type=transcript|length=1117bp
AACACAccctgaaaaataattttaaattaattttatcTTGGTCCTTTACA
TACATATTATTTGTCGACAAGATTTCTTCAGTATGAATAAAATATTCTTC
CGTATAAGTAAATGAATATGTGTTCATGTAAAAGTTATCGAGCTTAACGA
GCATAAATTGTTCATCAAAGCTCTGGTCCTTTGTGTTTTCTTCCATACAC
TCCAGCTGGTACAATCGTCAAAAAACGTCCTCTAACATCAAAGTACAGTT
CCCATAAGTATTATACTATGTTGCCTCTTTCTAATTGGACTGTTCTATTt
gatttccatacaggggggtagACGAGTCTTTTTAAGCcaagaaaagtttt
tcaaaatgtacaATGTAATGATNATAAATGAATGTTCTCTTTATAAGAAT
GAATAAGTTGGCAACTTTATGCATGTGTACTTGTAACGAAATAAATATAA
GTTAGACAGTGTTTAATACAGATAATGTATAATTTATGGACTACGtataa
ttaaagtaaatgactTTCAAACTTTCGTCGAATTCGAATAGCTTTCTTGT
TTACAAAATCATTAAGAATACACCCATGTGTCACAGATCTGGTAGATTCC
TATCCCCACTGATTAAAGTAGCGAAAAAATCGTTCCCTGTGGAAAAATTG
CCCTgaattttcaactttcattggaaatagaATGGAAAGAGTTGCATGGG
TGTTACACAAAAGTTCCATCAGGGCATTGAGACAGAGGTGTAATTGTCAA
GTAGAAGAGTGGAAAACACAccctgaaaaataattttaaattaattttat
cTTGGTCCTTTACATACATATTATTTGTCGACAAGATTTCTTCAGTATGA
ATAAAATATTCTTCCGTATAAGTAAATGAATATGTGTTCATGTAAAAGTT
ATCGAGCTTAACGAGCATAAATTGTTCATCAAAGCTCTGGTCCTTTGTGT
TTTCTTCCATACACTCCAGCTGGTACAATCGTCAAAAAACGTCCTCTAAC
ATCAAAGTACAGTTCCCATAAGTATTATACTATGTTGCCTCTTTCTAATT
GGACTGTTCTATTtgatttccatacagggggatAGACGAGTCTTTTTAAG
Ccaagaaaagtttttca Run BLAST on NCBI transcript from alignment at scaffold_354:1114948..1116064 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061271 ID=TCONS_00061271|Name=TCONS_00061271|organism=Clytia hemisphaerica|type=transcript|length=1117bp|location=Sequence derived from alignment at scaffold_354:1114948..1116064 (Clytia hemisphaerica)
tgaaaaacttttcttgGCTTAAAAAGACTCGTCTatccccctgtatggaa
atcaAATAGAACAGTCCAATTAGAAAGAGGCAACATAGTATAATACTTAT
GGGAACTGTACTTTGATGTTAGAGGACGTTTTTTGACGATTGTACCAGCT
GGAGTGTATGGAAGAAAACACAAAGGACCAGAGCTTTGATGAACAATTTA
TGCTCGTTAAGCTCGATAACTTTTACATGAACACATATTCATTTACTTAT
ACGGAAGAATATTTTATTCATACTGAAGAAATCTTGTCGACAAATAATAT
GTATGTAAAGGACCAAgataaaattaatttaaaattatttttcagggTGT
GTTTTCCACTCTTCTACTTGACAATTACACCTCTGTCTCAATGCCCTGAT
GGAACTTTTGTGTAACACCCATGCAACTCTTTCCATtctatttccaatga
aagttgaaaattcAGGGCAATTTTTCCACAGGGAACGATTTTTTCGCTAC
TTTAATCAGTGGGGATAGGAATCTACCAGATCTGTGACACATGGGTGTAT
TCTTAATGATTTTGTAAACAAGAAAGCTATTCGAATTCGACGAAAGTTTG
AAagtcatttactttaattataCGTAGTCCATAAATTATACATTATCTGT
ATTAAACACTGTCTAACTTATATTTATTTCGTTACAAGTACACATGCATA
AAGTTGCCAACTTATTCATTCTTATAAAGAGAACATTCATTTATNATCAT
TACATtgtacattttgaaaaacttttcttgGCTTAAAAAGACTCGTctac
ccccctgtatggaaatcaAATAGAACAGTCCAATTAGAAAGAGGCAACAT
AGTATAATACTTATGGGAACTGTACTTTGATGTTAGAGGACGTTTTTTGA
CGATTGTACCAGCTGGAGTGTATGGAAGAAAACACAAAGGACCAGAGCTT
TGATGAACAATTTATGCTCGTTAAGCTCGATAACTTTTACATGAACACAT
ATTCATTTACTTATACGGAAGAATATTTTATTCATACTGAAGAAATCTTG
TCGACAAATAATATGTATGTAAAGGACCAAgataaaattaatttaaaatt
atttttcagggTGTGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061271-exon-scaffold_354-1491911889:1114948..1116064 | TCONS_00061271-exon-scaffold_354-1491911889:1114948..1116064 | Clytia hemisphaerica | exon |
| TCONS_00061271-exon-scaffold_354-1510915933:1114948..1116064 | TCONS_00061271-exon-scaffold_354-1510915933:1114948..1116064 | Clytia hemisphaerica | exon |
| TCONS_00061271-exon-scaffold_354-1575043694:1114948..1116064 | TCONS_00061271-exon-scaffold_354-1575043694:1114948..1116064 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_354 | supercontig | scaffold_354:1114948..1116064 . |
Blast
The following BLAST results are available for this feature:
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