TCONS_00061266 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061266
Unique NameTCONS_00061266
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length179

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061266 ID=TCONS_00061266|Name=TCONS_00061266|organism=Clytia hemisphaerica|type=transcript|length=179bp
gtcCAGAAGCTGTTTATTGCAATTTCCTGTTGGGGTTGAAGTCTCATCAT
TAAGAGGTGTGTGTGGTATGTTGAAATCCCCAAGGATGTATGTGTCAGGT
GTACAATCAGTAATACTATCAATTTTTGCTATCATTGCAGAAAGGAGTTC
TTGTAATTCAGGTGCTTCAGATTTGTGGT
Run BLAST on NCBI

transcript from alignment at scaffold_354:980279..980457

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061266 ID=TCONS_00061266|Name=TCONS_00061266|organism=Clytia hemisphaerica|type=transcript|length=179bp|location=Sequence derived from alignment at scaffold_354:980279..980457 (Clytia hemisphaerica)
ACCACAAATCTGAAGCACCTGAATTACAAGAACTCCTTTCTGCAATGATA
GCAAAAATTGATAGTATTACTGATTGTACACCTGACACATACATCCTTGG
GGATTTCAACATACCACACACACCTCTTAATGATGAGACTTCAACCCCAA
CAGGAAATTGCAATAAACAGCTTCTGgac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038436XLOC_038436Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061266-exon-scaffold_354-1491911889:980279..980457TCONS_00061266-exon-scaffold_354-1491911889:980279..980457Clytia hemisphaericaexon
TCONS_00061266-exon-scaffold_354-1510915933:980279..980457TCONS_00061266-exon-scaffold_354-1510915933:980279..980457Clytia hemisphaericaexon
TCONS_00061266-exon-scaffold_354-1575043694:980279..980457TCONS_00061266-exon-scaffold_354-1575043694:980279..980457Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:980279..980457 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061266 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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