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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061264 ID=TCONS_00061264|Name=TCONS_00061264|organism=Clytia hemisphaerica|type=transcript|length=1681bp
TCATGTTTTGacactgggtaaattttggaacatcaaatatgCCCATCCCT
ATACCATAGCAGGATCTGTTCTAACatgttgaccaagaaaaagatctagg
agtgataatcgatagtgacctgacctttgaagcccatatattcagtaaaa
tcaagaaagctaacttTATTGTTGGCTTGattagcaggagcttcgaattt
ctctcaccagatatgtttccatttggaatatgcacatattgtatggtctc
caaggctaatcaaacatatcaatgcaatcgagggcgtccaacgaagagct
acaaggctagttagttgctatagaaactactcataTGAAGATCGGCTACG
AATCATCAATCTACCTAGCCTAAAGACCAGAcggcaagttggtgatatgg
tggaagttttcaagaacctccacattaatgacgagtctataagatcagag
aaatttactcctcggACACGACCAAgacgtcagcatgattacgagcttca
aaggaactttgctaatgacggtatgagaggctaccaaagcatCTCTCTTT
TTTaccttggaatgatctagaagaagatattgttgaagcatCATCCTTcc
aagtcttcaaagagcgtttgataaaatAATGGGaggaaaaactttataaa
atgtaaaatcaaaagctCTGTTTCAAataggtcaatagacctgcaaaata
tattactataaaataaaataaaaattataataacaataataataatacct
GACACGGGCAATACACTAGaaatacaaattttattttaacctAAATTTCC
ACTTATAACTTTCTTTCGAGCTCGGTGCTCTTTTCGTCTTTCATAGATCG
CAATTCGATTTGCATtcacattttgacagacttttacAATGGTTCGTCTC
CATAGTTGACGATCAACAACCAGATCCTGCCATTGGCCTAAGATTCTTCC
AGATTTAAGAACACTTTTGCACGTATCTTTATATCGTAGTTTCGGTAGAC
CAACAGAACGAGTGCCTTTGTCGAGCTTACCATACATAAGAGCTTTAACG
GGACAATTGTCGTCATTCTTGACACATNCCTTTGTCAAGCTTACCATACA
TAAGAGCTTTAACGGGAAATTGTCGTCATTCTTGACACATGAGCAAGCCA
ACGATTTTTAATGAGTGTTATTTCTATATCGTCAACATCTGCTCTTctta
gtactttttcattgctTACAAAGTCACTCCATTTTATTTGGAGAATCTTT
CTCAAATGCCATTGTTGGACTGTGGGAAGCTGATTGATGTGGTGTCGATA
TAGTGTCCAGCTTTCAGAACCATATGTGAGAATATGTGTTAAAAGCTGAG
CATACACTTTCAGTTTTGTTGATATTGTAAGGTCATGCAAGTCGAAAACA
CATTCACAAAGCCTGCCATAAGCAGAAGACAAAGCTTGTATACGTGTGAT
GAGCTCTGTGCTCATTGAACAATCGTTGGTAACAATGCTTCCAAGGTATT
TGAAATGTTTCACACTTTTGATTGGTGTACCGCCAATGAAAAATTCCTCT
TCCGGACCAATCTGAACCAATGGACATTGTCTCGGTTTTCTTTATATTGA
TCAAAAGCCCCATTCGTTTAGCCATGTTATTATAAGCATTCTATTAAACG
AGATCACCGTCATAACTAAATCTGATTTTTA Run BLAST on NCBI transcript from alignment at scaffold_354:952428..954108 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061264 ID=TCONS_00061264|Name=TCONS_00061264|organism=Clytia hemisphaerica|type=transcript|length=1681bp|location=Sequence derived from alignment at scaffold_354:952428..954108 (Clytia hemisphaerica)
TAAAAATCAGATTTAGTTATGACGGTGATCTCGTTTAATAGAATGCTTAT
AATAACATGGCTAAACGAATGGGGCTTTTGATCAATATAAAGAAAACCGA
GACAATGTCCATTGGTTCAGATTGGTCCGGAAGAGGAATTTTTCATTGGC
GGTACACCAATCAAAAGTGTGAAACATTTCAAATACCTTGGAAGCATTGT
TACCAACGATTGTTCAATGAGCACAGAGCTCATCACACGTATACAAGCTT
TGTCTTCTGCTTATGGCAGGCTTTGTGAATGTGTTTTCGACTTGCATGAC
CTTACAATATCAACAAAACTGAAAGTGTATGCTCAGCTTTTAACACATAT
TCTCACATATGGTTCTGAAAGCTGGACACTATATCGACACCACATCAATC
AGCTTCCCACAGTCCAACAATGGCATTTGAGAAAGATTCTCCAAATAAAA
TGGAGTGACTTTGTAagcaatgaaaaagtactaagAAGAGCAGATGTTGA
CGATATAGAAATAACACTCATTAAAAATCGTTGGCTTGCTCATGTGTCAA
GAATGACGACAATTTCCCGTTAAAGCTCTTATGTATGGTAAGCTTGACAA
AGGNATGTGTCAAGAATGACGACAATTGTCCCGTTAAAGCTCTTATGTAT
GGTAAGCTCGACAAAGGCACTCGTTCTGTTGGTCTACCGAAACTACGATA
TAAAGATACGTGCAAAAGTGTTCTTAAATCTGGAAGAATCTTAGGCCAAT
GGCAGGATCTGGTTGTTGATCGTCAACTATGGAGACGAACCATTgtaaaa
gtctgtcaaaatgtgaATGCAAATCGAATTGCGATCTATGAAAGACGAAA
AGAGCACCGAGCTCGAAAGAAAGTTATAAGTGGAAATTTaggttaaaata
aaatttgtatttCTAGTGTATTGCCCGTGTCaggtattattattattgtt
attataatttttattttattttatagtaatatattttgcaggtctattga
cctatTTGAAACAGagcttttgattttacattttataaagtttttcctCC
CATTattttatcaaacgctctttgaagacttggAAGGATGatgcttcaac
aatatcttcttctagatcattccaaggtAAAAAAGAGAGatgctttggta
gcctctcataccgtcattagcaaagttcctttgaagctcgtaatcatgct
gacgtcTTGGTCGTGTccgaggagtaaatttctctgatcttatagactcg
tcattaatgtggaggttcttgaaaacttccaccatatcaccaacttgccg
TCTGGTCTTTAGGCTAGGTAGATTGATGATTCGTAGCCGATCTTCAtatg
agtagtttctatagcaactaactagccttgtagctcttcgttggacgccc
tcgattgcattgatatgtttgattagccttggagaccatacaatatgtgc
atattccaaatggaaacatatctggtgagagaaattcgaagctcctgcta
atCAAGCCAACAATAaagttagctttcttgattttactgaatatatgggc
ttcaaaggtcaggtcactatcgattatcactcctagatctttttcttggt
caacatGTTAGAACAGATCCTGCTATGGTATAGGGATGGGcatatttgat
gttccaaaatttacccagtgtCAAAACATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061264-exon-scaffold_354-1491911889:952428..954108 | TCONS_00061264-exon-scaffold_354-1491911889:952428..954108 | Clytia hemisphaerica | exon |
| TCONS_00061264-exon-scaffold_354-1510915933:952428..954108 | TCONS_00061264-exon-scaffold_354-1510915933:952428..954108 | Clytia hemisphaerica | exon |
| TCONS_00061264-exon-scaffold_354-1575043694:952428..954108 | TCONS_00061264-exon-scaffold_354-1575043694:952428..954108 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_354 | supercontig | scaffold_354:952428..954108 . |
Blast
The following BLAST results are available for this feature:
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