TCONS_00061262 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061262
Unique NameTCONS_00061262
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length293

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061262 ID=TCONS_00061262|Name=TCONS_00061262|organism=Clytia hemisphaerica|type=transcript|length=293bp
CACCAACCAGAGACATCCGCGCCATCTAATTACCACTTCCAAGATGTAAA
TAATAAGCAAATGAGATTGTGTACTGAACTTCATAGAGTTTGGCTGGCGG
AATGCAAAACTATAGCCCGAAACACCACTCAAATGTGCTTATTAGCATAC
GCGAACGCTTTTTTTGCACGAAAATCGGACCGTAGCGGGCCGTtccgtaa
aaagaaaaacaaatctttagctCGTGTTCGCAAAATTTTAGGCTCTGTAC
GGCAGATTATTAAGGATGTTAATTTTTGAGGAACGCACCAgag
Run BLAST on NCBI

transcript from alignment at scaffold_354:947611..947903

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061262 ID=TCONS_00061262|Name=TCONS_00061262|organism=Clytia hemisphaerica|type=transcript|length=293bp|location=Sequence derived from alignment at scaffold_354:947611..947903 (Clytia hemisphaerica)
ctcTGGTGCGTTCCTCAAAAATTAACATCCTTAATAATCTGCCGTACAGA
GCCTAAAATTTTGCGAACACGagctaaagatttgtttttctttttacgga
ACGGCCCGCTACGGTCCGATTTTCGTGCAAAAAAAGCGTTCGCGTATGCT
AATAAGCACATTTGAGTGGTGTTTCGGGCTATAGTTTTGCATTCCGCCAG
CCAAACTCTATGAAGTTCAGTACACAATCTCATTTGCTTATTATTTACAT
CTTGGAAGTGGTAATTAGATGGCGCGGATGTCTCTGGTTGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038432XLOC_038432Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061262-exon-scaffold_354-1491911889:947611..947903TCONS_00061262-exon-scaffold_354-1491911889:947611..947903Clytia hemisphaericaexon
TCONS_00061262-exon-scaffold_354-1510915933:947611..947903TCONS_00061262-exon-scaffold_354-1510915933:947611..947903Clytia hemisphaericaexon
TCONS_00061262-exon-scaffold_354-1575043694:947611..947903TCONS_00061262-exon-scaffold_354-1575043694:947611..947903Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:947611..947903 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.842208	1.03201	1.43039	2.10133	1.27486	1.89556	0.593998	2.41012	0.389005	0.879093	1.39774	1.28689	1.28196	2.90848	0	1.6415	0.948363	0.360644	2.50428	1.28815	0.991148	0.769678	0.76882	0	1.16529	0.807014	1.2642	1.39768	0	1.4286
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061262 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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