TCONS_00061257 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061257
Unique NameTCONS_00061257
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length336

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061257 ID=TCONS_00061257|Name=TCONS_00061257|organism=Clytia hemisphaerica|type=transcript|length=336bp
ttttgatttaactttgtattttaatgaccagacaggtcattcatttgagg
gctatgcatgttagcctgcctccactgatgcaagttaccgaTCTCAGGCA
GGGTGTGCGAGCCCTTGTGTTGGATATCCAGCtggagttttcaaattttg
agcaaaacCAAAAGTAGTAGTTGGCTGGTGGTTGGGCAAGTATTGGGCTG
TTGGGGGCAGATACATATACAAACCCTATCATCCTTTATATTATATACTT
CACTTATCTTTGTTTTGTCTTGGCTGGGACCTGGGTATGTCGAAGGTGAA
ACTGGAACGACCTGATGCTTGATCTGACTGCACTGC
Run BLAST on NCBI

transcript from alignment at scaffold_354:845118..845453

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061257 ID=TCONS_00061257|Name=TCONS_00061257|organism=Clytia hemisphaerica|type=transcript|length=336bp|location=Sequence derived from alignment at scaffold_354:845118..845453 (Clytia hemisphaerica)
GCAGTGCAGTCAGATCAAGCATCAGGTCGTTCCAGTTTCACCTTCGACAT
ACCCAGGTCCCAGCCAAGACAAAACAAAGATAAGTGAAGTATATAATATA
AAGGATGATAGGGTTTGTATATGTATCTGCCCCCAACAGCCCAATACTTG
CCCAACCACCAGCCAACTACTACTTTTGgttttgctcaaaatttgaaaac
tccaGCTGGATATCCAACACAAGGGCTCGCACACCCTGCCTGAGAtcggt
aacttgcatcagtggaggcaggctaacatgcatagccctcaaatgaatga
cctgtctggtcattaaaatacaaagttaaatcaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038427XLOC_038427Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061257-exon-scaffold_354-1491911889:845118..845453TCONS_00061257-exon-scaffold_354-1491911889:845118..845453Clytia hemisphaericaexon
TCONS_00061257-exon-scaffold_354-1510915933:845118..845453TCONS_00061257-exon-scaffold_354-1510915933:845118..845453Clytia hemisphaericaexon
TCONS_00061257-exon-scaffold_354-1575043694:845118..845453TCONS_00061257-exon-scaffold_354-1575043694:845118..845453Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:845118..845453 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.30894	1.46521	1.24172	2.02838	0.450537	0.3276	0.696212	0.778396	0	0.700644	0	1.34085	0.693371	0.674769	0.388391	0.724854	0	0.720633	0	0	1.73661	2.92815	0.379821	0.35028	0.638509	0	0.911859	0	0.94948	1.21003
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061257 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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