TCONS_00061255 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061255
Unique NameTCONS_00061255
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length292

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061255 ID=TCONS_00061255|Name=TCONS_00061255|organism=Clytia hemisphaerica|type=transcript|length=292bp
NGGGTTCATGGGCCAACTTGAAGTTTGAGTTGGGGGTTGTTGTTGATTCC
AATCATTTCCATTTGATGAGACTCCCAACGAATGAGCTGCAGCCTTATTT
GTGGCCAAATAATTTGATAAAGCAGGAGAGGGCTTCTTGACATTTTGAAT
AGGAGATGGTGCTTGTGCTGTACGTCTTGAACTTTGAGGAAGGAAGGAGG
AATTTGAACTCACCGGAGCCAATGAATTGATAAAATATTGGTCGTCTTTG
TCAGCAGAGTTGTTACCCCACAGATGTAAACTTGTAGAAATT
Run BLAST on NCBI

transcript from alignment at scaffold_354:801316..801607

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061255 ID=TCONS_00061255|Name=TCONS_00061255|organism=Clytia hemisphaerica|type=transcript|length=292bp|location=Sequence derived from alignment at scaffold_354:801316..801607 (Clytia hemisphaerica)
AATTTCTACAAGTTTACATCTGTGGGGTAACAACTCTGCTGACAAAGACG
ACCAATATTTTATCAATTCATTGGCTCCGGTGAGTTCAAATTCCTCCTTC
CTTCCTCAAAGTTCAAGACGTACAGCACAAGCACCATCTCCTATTCAAAA
TGTCAAGAAGCCCTCTCCTGCTTTATCAAATTATTTGGCCACAAATAAGG
CTGCAGCTCATTCGTTGGGAGTCTCATCAAATGGAAATGATTGGAATCAA
CAACAACCCCCAACTCAAACTTCAAGTTGGCCCATGAACCCN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038425XLOC_038425Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061255-exon-scaffold_354-1491911889:801316..801607TCONS_00061255-exon-scaffold_354-1491911889:801316..801607Clytia hemisphaericaexon
TCONS_00061255-exon-scaffold_354-1510915933:801316..801607TCONS_00061255-exon-scaffold_354-1510915933:801316..801607Clytia hemisphaericaexon
TCONS_00061255-exon-scaffold_354-1575043694:801316..801607TCONS_00061255-exon-scaffold_354-1575043694:801316..801607Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:801316..801607 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.569079	0.238287	0	0.319253	0	0.501478	0	0.625246	12.0197	14.6176	7.15749	10.8867	9.2574	10.047	14.2448	22.5104	19.5434	19.998	5.99402	8.88261	15.3375	11.2473	7.39272	5.9484	0.60264	0.526756	5.80341	3.14819	0	1.23484
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061255 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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