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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061251 ID=TCONS_00061251|Name=TCONS_00061251|organism=Clytia hemisphaerica|type=transcript|length=762bp
CTTGGTTTCTTTGTAAAAGTTACGTCATATATTTCACGACTTCCAAACAT
ATGATTAATCTAACAAACGCTTACAAACTGTGTAGACCGTCCTTTTAAAT
ATTCCTTATTCAAGTTTTCATGTCCTAGTCATAAAGTCGATTCTTCGATC
TCTGCATGTCTTGATACCGCGCGTTTTATTCTTCTCCTCGCTTTCTCGTG
TAGAAAAAAGTAAATTATAACGTCCCATATACCATTCGAAAAgccaaaca
tttgaaaaatgtatATTACCACGCTTTCAAATTTCACGTACAAGTCTATC
ACGATGATTATAGAGAGAGGTACCCATGTAAATAAATACGATAACGTAAT
ATAAATACagatttttagcgattttagTTTCCGCTGTTTCATATTTTGGC
GTTTTCTATTTTGTTGTTGCGACGACCTGTCAACGATTGTTCTCGAGATT
TTCCGACATTGTTTTTTCACCGACCGATACAACAGTGCGTTTGAAATGGC
AATGAATATTCCACCGAATAGTGTCGTTGCTGAACCGACTAAGTAAGCTT
TACTGGAGTACAAAAGGGCAATCCAAAAAGATAACAAAACCGTAAATGAG
CCGGCCAGAAACAAAAGGGCGTGTTTTTTACCAAGATGTGCGTAGAAAAA
TGGTTTTCGGATAGCCACAAACCGCTCAATGGAAAGTAAAAGTGTGAACA
CTACTTCAGCGCTGCCAATACAATTTCTTGCCATCATAGCTGCATACCTT
CCAAAGGACTGC Run BLAST on NCBI protein sequence of TCONS_00061251-protein >TCONS_00061251-protein ID=TCONS_00061251-protein|Name=TCONS_00061251-protein|organism=Clytia hemisphaerica|type=polypeptide|length=210bp
QSFGRYAAMMARNCIGSAEVVFTLLLSIERFVAIRKPFFYAHLGKKHALL
FLAGSFTVLLSFWIALLYSSKAYLVGSATTLFGGIFIAISNALLYRSVKK
QCRKISRTIVDRSSQQQNRKRQNMKQRKLKSLKICIYITLSYLFTWVPLS
IIIVIDLYVKFESVVIYIFQMFGFSNGIWDVIIYFFLHEKARRRIKRAVS
RHAEIEESTL Run BLAST on NCBI transcript from alignment at scaffold_354:724957..725718 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061251 ID=TCONS_00061251|Name=TCONS_00061251|organism=Clytia hemisphaerica|type=transcript|length=762bp|location=Sequence derived from alignment at scaffold_354:724957..725718 (Clytia hemisphaerica)
GCAGTCCTTTGGAAGGTATGCAGCTATGATGGCAAGAAATTGTATTGGCA
GCGCTGAAGTAGTGTTCACACTTTTACTTTCCATTGAGCGGTTTGTGGCT
ATCCGAAAACCATTTTTCTACGCACATCTTGGTAAAAAACACGCCCTTTT
GTTTCTGGCCGGCTCATTTACGGTTTTGTTATCTTTTTGGATTGCCCTTT
TGTACTCCAGTAAAGCTTACTTAGTCGGTTCAGCAACGACACTATTCGGT
GGAATATTCATTGCCATTTCAAACGCACTGTTGTATCGGTCGGTGAAAAA
ACAATGTCGGAAAATCTCGAGAACAATCGTTGACAGGTCGTCGCAACAAC
AAAATAGAAAACGCCAAAATATGAAACAGCGGAAActaaaatcgctaaaa
atctGTATTTATATTACGTTATCGTATTTATTTACATGGGTACCTCTCTC
TATAATCATCGTGATAGACTTGTACGTGAAATTTGAAAGCGTGGTAATat
acatttttcaaatgtttggcTTTTCGAATGGTATATGGGACGTTATAATT
TACTTTTTTCTACACGAGAAAGCGAGGAGAAGAATAAAACGCGCGGTATC
AAGACATGCAGAGATCGAAGAATCGACTTTATGACTAGGACATGAAAACT
TGAATAAGGAATATTTAAAAGGACGGTCTACACAGTTTGTAAGCGTTTGT
TAGATTAATCATATGTTTGGAAGTCGTGAAATATATGACGTAACTTTTAC
AAAGAAACCAAG Coding sequence (CDS) from alignment at scaffold_354:724957..725718 >TCONS_00061251 ID=TCONS_00061251|Name=TCONS_00061251|organism=Clytia hemisphaerica|type=CDS|length=633bp|location=Sequence derived from alignment at scaffold_354:724957..725718 (Clytia hemisphaerica)
CAGTCCTTTGGAAGGTATGCAGCTATGATGGCAAGAAATTGTATTGGCAG
CGCTGAAGTAGTGTTCACACTTTTACTTTCCATTGAGCGGTTTGTGGCTA
TCCGAAAACCATTTTTCTACGCACATCTTGGTAAAAAACACGCCCTTTTG
TTTCTGGCCGGCTCATTTACGGTTTTGTTATCTTTTTGGATTGCCCTTTT
GTACTCCAGTAAAGCTTACTTAGTCGGTTCAGCAACGACACTATTCGGTG
GAATATTCATTGCCATTTCAAACGCACTGTTGTATCGGTCGGTGAAAAAA
CAATGTCGGAAAATCTCGAGAACAATCGTTGACAGGTCGTCGCAACAACA
AAATAGAAAACGCCAAAATATGAAACAGCGGAAActaaaatcgctaaaaa
tctGTATTTATATTACGTTATCGTATTTATTTACATGGGTACCTCTCTCT
ATAATCATCGTGATAGACTTGTACGTGAAATTTGAAAGCGTGGTAATata
catttttcaaatgtttggcTTTTCGAATGGTATATGGGACGTTATAATTT
ACTTTTTTCTACACGAGAAAGCGAGGAGAAGAATAAAACGCGCGGTATCA
AGACATGCAGAGATCGAAGAATCGACTTTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061251-exon-scaffold_354-1491911889:724957..725718 | TCONS_00061251-exon-scaffold_354-1491911889:724957..725718 | Clytia hemisphaerica | exon |
| TCONS_00061251-exon-scaffold_354-1510915933:724957..725718 | TCONS_00061251-exon-scaffold_354-1510915933:724957..725718 | Clytia hemisphaerica | exon |
| TCONS_00061251-exon-scaffold_354-1575043694:724957..725718 | TCONS_00061251-exon-scaffold_354-1575043694:724957..725718 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_354 | supercontig | scaffold_354:724957..725718 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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