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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061229 ID=TCONS_00061229|Name=TCONS_00061229|organism=Clytia hemisphaerica|type=transcript|length=1266bp
TCTTTACGAGACATTTTCATGGTTCAAACCATAGCTGGTAAATTGTGAAT
TGCTTTTGTTTTCAGTCTTTCTACAAGCACATGCCTCTTTGGATCTTGAG
ATTCTCGGCTTCTCTAGCAGCTACATTATCTGAGAAGAGATGAACTTGAA
ATGTGTATTTGAAATAGAAAAGATAATATAAGACACAAGATTTCGGATAG
CCTTAAATTTCCCAAAGGAAATTCTACTGAGAAAATTGCTTACTTTGAAA
AAAAGCGTATGAATACCTTGAGCTTTGCCTTTTTTTACGTTCTTCAACAT
GGTAACATCTACGAAATAGtagatatttttcaagtttgaaGCAAGCAATA
TACTTGCCAAATTATTATCAAATCAGCGTTTTGTCATTCCCTAAAAGTAC
CAGCACTGAAGCTATTAACATTGATAATTGTCAAGATGATGTAACACTGA
CGATAAGACTATTCTTACCAGTAAAAGCGAGCTCGTGATTCTTTATAGGC
CGCAATTGGTTTGTCCTTTTTTGCCTCACGACTTctgaaaagatgaaaaa
ttgaatgatcACTTCTGGGCATgcaaaaattcagttttttgacGGAAAAA
TTAGTCTCAGAAAAGAGACTGAAAGCTTTTATTTAAAGAGTTTGTAGAAA
ATAACGAATCCTGATAGAGACTTTATAATGTTGATTTGATTTTAGATTTT
AAGGATAGGGATTCAAGCTTGGACTTATGAACTGTTTCTTTTAATAGAAA
ATCTCTTCCATCCccataaaatatataaataataaatatcagtataaata
ataataatgataacaaAAATAACTAATATTCTTTACCCTCTTTTATGCAG
CAATCGCCTTTGTTTGGTTTGAAGACATCTAGGCTCTAAAACTCAATGTT
TACATACTTGGTATTTATTGATGAAAAGAGCTCTTCCAATTGAGCAAAAC
GTGTACAACATTCTGACCGAGATTTATTTGTCGTTTTATTAAAGGggact
ttaaaaaatttgagattctTTCAGGGTTCCAGCAgtacttgatttaaaaa
tttcaccCTTCCAGGTCAACTAGAAGCTGCTAAGATtatacaaaaaaatc
ataaattctgcattttatTCAGGGAAAAACTTATCCAATTTTAAGAGAAC
AGTTTTCATTTCGAACATTTCcctaaatacacgttttttcataagaacct
cGGATGTCTTtacactttttggattttaaaagttttcttaaaatattctt
gttttcacaatttttt Run BLAST on NCBI transcript from alignment at scaffold_354:60173..61438 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061229 ID=TCONS_00061229|Name=TCONS_00061229|organism=Clytia hemisphaerica|type=transcript|length=1266bp|location=Sequence derived from alignment at scaffold_354:60173..61438 (Clytia hemisphaerica)
aaaaaattgtgaaaacaagaatattttaagaaaacttttaaaatccaaaa
agtgtaAAGACATCCgaggttcttatgaaaaaacgtgtatttaggGAAAT
GTTCGAAATGAAAACTGTTCTCTTAAAATTGGATAAGTTTTTCCCTGAat
aaaatgcagaatttatgatttttttgtataATCTTAGCAGCTTCTAGTTG
ACCTGGAAGggtgaaatttttaaatcaagtacTGCTGGAACCCTGAAaga
atctcaaattttttaaagtccCCTTTAATAAAACGACAAATAAATCTCGG
TCAGAATGTTGTACACGTTTTGCTCAATTGGAAGAGCTCTTTTCATCAAT
AAATACCAAGTATGTAAACATTGAGTTTTAGAGCCTAGATGTCTTCAAAC
CAAACAAAGGCGATTGCTGCATAAAAGAGGGTAAAGAATATTAGTTATTT
ttgttatcattattattatttatactgatatttattatttatatatttta
tggGGATGGAAGAGATTTTCTATTAAAAGAAACAGTTCATAAGTCCAAGC
TTGAATCCCTATCCTTAAAATCTAAAATCAAATCAACATTATAAAGTCTC
TATCAGGATTCGTTATTTTCTACAAACTCTTTAAATAAAAGCTTTCAGTC
TCTTTTCTGAGACTAATTTTTCCgtcaaaaaactgaatttttgcATGCCC
AGAAGTgatcattcaatttttcatcttttcagAAGTCGTGAGGCAAAAAA
GGACAAACCAATTGCGGCCTATAAAGAATCACGAGCTCGCTTTTACTGGT
AAGAATAGTCTTATCGTCAGTGTTACATCATCTTGACAATTATCAATGTT
AATAGCTTCAGTGCTGGTACTTTTAGGGAATGACAAAACGCTGATTTGAT
AATAATTTGGCAAGTATATTGCTTGCttcaaacttgaaaaatatctaCTA
TTTCGTAGATGTTACCATGTTGAAGAACGTAAAAAAAGGCAAAGCTCAAG
GTATTCATACGCTTTTTTTCAAAGTAAGCAATTTTCTCAGTAGAATTTCC
TTTGGGAAATTTAAGGCTATCCGAAATCTTGTGTCTTATATTATCTTTTC
TATTTCAAATACACATTTCAAGTTCATCTCTTCTCAGATAATGTAGCTGC
TAGAGAAGCCGAGAATCTCAAGATCCAAAGAGGCATGTGCTTGTAGAAAG
ACTGAAAACAAAAGCAATTCACAATTTACCAGCTATGGTTTGAACCATGA
AAATGTCTCGTAAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061229-exon-scaffold_354-1491911889:60173..61438 | TCONS_00061229-exon-scaffold_354-1491911889:60173..61438 | Clytia hemisphaerica | exon |
| TCONS_00061229-exon-scaffold_354-1510915933:60173..61438 | TCONS_00061229-exon-scaffold_354-1510915933:60173..61438 | Clytia hemisphaerica | exon |
| TCONS_00061229-exon-scaffold_354-1575043694:60173..61438 | TCONS_00061229-exon-scaffold_354-1575043694:60173..61438 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_354 | supercontig | scaffold_354:60173..61438 . |
Blast
The following BLAST results are available for this feature:
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