TCONS_00061180 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061180
Unique NameTCONS_00061180
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2201

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061180 ID=TCONS_00061180|Name=TCONS_00061180|organism=Clytia hemisphaerica|type=transcript|length=2201bp
ATTTGGTAAAGAATAGGTAAGGGAATGCAATTCAGAAGATCGGACGTTTA
AAATAGAGCTAAGAATGTCCGAAAGCACAGAATGTTCTGATGGGAGCTGG
TTAAGTGGTCCGACGTTTGCTCAAGACTTTGTGTCACATTATGGTACTCT
AAAGAACATGGAGAATAAGTCACGATTCTTCCAATTGCTATCAGAAAAAC
TCGGTTGTAATAATGAAGACATCCAAAACAATATGAAGCTGCTAAAAGAA
TCCATGGATACGAGAGACAAACTCACACACCGTCATCGTCATCAACTCTC
CGCTAGCCTGACTCCCACTTACAAACAATTATTTGATGATGTCAGCAAAT
TGGAAGATGGTGTAGGATTCCTTGTGGATATGAGAAAAGATTTATTGTTC
TCACAAAGGAAAGGATTTGTGCCGAAAACACTGGAGTTGCAAACATTCGA
TACTTTTTTGAAAGAACACTTAGCTCAATGGTTTGCTGGTGGATTTCTGG
ATCTTCACCAAGTCACGTGGGATGAAACATCTGCTGACCTCATGGAAAAG
TTAATGAAATACGAAGCAGTACATCCTATTGTCAATTGGAATGATCTGAA
GAAGCGTGCAGCGGTTGGTCGAAGGATCTTCATGTTTTCACATCGTTTGA
TGCCTGGTGAACCACTTGTTGTATTATATGTGTTGCTTGGCAACCATATA
CCAAATAATATACAGAACGTCTTGAGTTCAGAACAAAGCGTAGAGGACAA
AGAAGAAATAACAACAGCAACATTTTATTCTATCTCATCCACGCAAAGAG
GTCTTGATGGGATCGGTCTCGGCAACGTGTTGATTAAAAGAGTTGTGGAA
GAGTTACGTCGTGAGTTCCATAACATGAAAACCTTCGTTACTTTATCCCC
AATCCCTGGATTTAAACGATGGTTAGATCAACAGATCAAAAATCATAAAG
aagGAGTTTCATCGCGTTATGGAGATCTCCTTGAAAGTTCTGCTATGGAA
CACCTCAGAGATGATGGCTGGGTGAAGGATATGAAAAAATGTAATCAATT
ACAACCAGTTCTTCAATCGTTATGTGCAAGataTTTGTTGCACGAGAAGC
GACGAGGCTTTGCGATGGACCCTGTCGCAAATTTCCATTTACGAAATGGT
GCATCTTTGTGGCGCATCAACTGGCTTGCAAACACTGAACCTCGTGGCTT
GAAGTCCTCACATACGCTCATGGTCAACTATCGATACGACTTATCACAGA
TTGAAACGAACAATTTAAAGTATGTAATGGGCGGAGAAATTACCGCCTCT
GAAAGTGTTTTGGAAATTGTGAGTTAGGTGGAACTTTACGATTATAGAAA
TTGATGGCTTTTGATTTAGAGtacaaaatttaccaaaatgttGTAGATTG
AattattttaaagctttttggcCCTTGAAATCGAAGCGTAACAAATTtgc
tttaaacaaaaaacgaaaCTCTGCTGTTATCAATAAACCAAATATGAAAT
ATTACAATTTCAATAACCCTTTAAGTTCCAATCTTTTTAAAAACGGTTCG
ACCTATTTCACCTTAACGTAAAATGAGTAGTGTCTAAATGTtaaatgtat
atattctttaaagtaaaaaagaaaggggaccccttcccattggaaaaatt
atcgtataaaaatatcgtccccggtggaaaattatcctctgatttttgtc
cccactgaaaataatcaaataagctAATCCTCACTGCATAATATTATGCT
ATTTCCCCATCCccctgaattttctgacttgaaaacaaaagaattcaaat
caccagccataaaaaatatggaaatatcgatccccatcgaatttcaggcc
gttatttttatccagactggctgaaaaaatcctaccgggtctgcgaTAGA
GCGTATGTgtgtcgtttttttttaattattgattttcttttcttttgatt
tgtaaAAATTAGAATATATTTTGATAGGTATTGTTTTACATGGGAAAATT
TTATGCATACATTTAGTTAAAACTGCCATATTgctatttcaaactttttg
tctaatattgcttaaaaaaactcaCATTTTAAATTTGAAGTAATGGTCTA
TTCGCTTTAACTAGGCCTTTAAATAGGCCCATTTCGCGCGCTTTTTATTT
TCGCGTACGTATTCCGCGCCAAAATTAATGGAATTAATGTATGTGAAGAA
T
Run BLAST on NCBI

transcript from alignment at scaffold_354:621607..632249-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061180 ID=TCONS_00061180|Name=TCONS_00061180|organism=Clytia hemisphaerica|type=transcript|length=10643bp|location=Sequence derived from alignment at scaffold_354:621607..632249- (Clytia hemisphaerica)
ATTTGGTAAAGAATAGGTAAGGGAATGCAATTCAGAAGATCGGACGTTTA
AAATAGAGCTAAGAATGTCCGAAAGCACAGAATGTTCTGATGGGAGCTGG
TTAAGTGGTCCGGTTAGTCTACCGTTTCTATACAACATACATTTCCGCAA
TCTCATAAAATCGGAAATTTGTGTTTTAAAAGACCTAATCATTTAAAGTA
ATGCTGAATTACTTTTTTTTTTACTATCGATGAAATTTGACCACTTTTTA
GGCTAATTTTAGTTACAGACAGGGGGTTTCTTTTTAAGAAAATGACATAA
CTCTAGTATAGAATGCTAAGCAACTATGATTTTAAAAAGATATGGAAGTA
AGAAAAACTGAATGGCATTATTGTAGTTTATAAAAACTTATATTATCCCA
TAATAATTATCGTATCGTTATAAAACACCTGTATTACAGTATTACGCAGA
TTATAAACGACTTCAGTCTACGTAATCTCGTAATATTGAAATATCAAGAA
TTCTGTAAAGTCGGACTTATTACTATCTTGGAGCGTTCCTCGACGTATAA
TCTCTCATAACATGATATTTTGTTTCTGTTTCAGACGTTTGCTCAAGACT
TTGTGTCACATTATGGTACTCTAAAGAACATGGTAACTAACTGGGCTTTC
TTATTGGGTGTTTTACAGACGTCGATATCACTTCAAGTCTTTCATCTTAC
ATTCGAATATCTAATTACATAAGTTTGTCTAGAATAAAAGGGAACAGAGT
TTTGTATAAATAAAAATCCATAAAACAATTAATCTTACCTCGGAACTTGG
AATAATTGTAAACATTGAAATTCCTTCAGTGTTGCAACTTTTCCGTTTGT
AGACGGAGTCTGATTTTGAGCTTTCCGACCATATTGGCCAAAGGTGGTTG
CAATACTTTCACTAGAAAATCAAGGCACTTATATCAGCCTATACAGGTGT
TTGGATGAAAGAAATAAAATAATTAGGTCAAAAAATATTAGTATTTTTTC
TTTATTTTATATGAATTAAATTTGTTTTTCCAGACCCACTGTAGTTGTAC
TTTGCTCTCTTATTTAGGAGAATAAGTCACGATTCTTCCAATTGCTATCA
GAAAAACTCGGTTGTAATAATGAAGACATCCAAAACAATATGAAGCTGCT
AAAAGAATCCATGGTAAATATTCCGATGATATCAACCTTTTTGTCTAGCT
CCCCTGAAAGTGTTAAAACAGTTGAAGCTCGCTAATTCGACGGTCTTCTA
TTCGATATGCTCCTTTATTTGATAAAAATCCAATCCCCCCCCCCCTTTTG
AAAGAAAGGATAAAGTCACAGAACGACGGTATTTAATGGGAGAAACATGG
TAAACATTTTCAGTACCGCTCTTTCTAAGCAATTTATCGAGTTAAAAATG
ACGTAGTTCCAAAGAATAACATGTATTTTTTTTTTCAATTCTAAGACCCC
ATTTCTATGTATTGGGATTTACTGGAATTTAAGGTGAATTTCAGTGAAAA
GTCATTATGGTTTCACATTGTACATCGGTACCACAAATACCATTAATTTG
GGTCGATTCATTAGCTTTAGAGAGTTTTGAGGGTGGTGGAGTGACCGAAG
CGATTTGGATAACCCGCGGGTTTGTTCCGCTAAATCGAGGACGGTAAAAG
TGCTGATTTAGCTTCGTCCCCGGTCAATCAGAATATATAAACAAATAGAA
GCCTACCGTCACCGTCGATGAAAAACACAGATACGTAAACTCGCTTTTAC
CTTCCACCAAAGGAACAGAACTTAGCTCAACACATTTTTCTTTTTGCGCA
GGATACGAGAGACAAACTCACACACCGTCATCGTCATCAACTCTCCGCTA
GCCTGACTCCCACTTACAAACAATTATTTGATGATGTCAGCAAATTGGAA
GATGGTGTAGGATTCCTTGTGGATATGAGAAAAGATTTATTGGTATGGGC
TTATAGTTTTATTACACGTTTTTTATAAGCACCAGATCCTTAAGGCTCGA
ACCCAGAAGTAAGCCTCGATCCCAGAAGTAAGCCAAACAGTTTTTACTAT
CGAATAACTTTTCCTTGCACCCTCACCCGAACATGTTTCTGCCAAAGCTG
AAAGGAAATCTTTAACGTATGAGCACTCTCGTTTCGCGTCACAACAAACC
AGGTGGAACTTAACTTAAACTTTCATTTTTATATAAAAACTCCATCAAAC
TCCTATCTCCACTGGGTAGATCCACCCACTATTATAAAACACAGAATCTC
CCATCCGCACACATTACTTTCTTTTATCACTTTTAACCCTTTCCGGATGA
GAGTTACTTTTTCAAAAAAGAAATTAAAAATATTCTGCATGACTTCTCAA
ATAGACCTCAAATCTTACTCAAAATTTCCTGCTTTTTCTATCGGTAGCTT
AACGAGCTCTTGGGAAGGCTTAGTTCTCGAGATATCCTCGTTTGGAGTAG
GCTTTTTAGCATTCGATCTCACGCAATAGACGATATCGGCTTTCGATAAA
TGCAATGCATTCTGGTTTCTAGGGACTCTCAAAGGAATTATAATCTATTA
TAATTGATCTATTATAATTCCTTTGAGAGTCCCTAGAAACCAGAATGCAT
TGCATTAATCGGAAGCCGATATCGTCTATTAGAAAAGGGGATAGACTCCC
TCACTCCCGGCTCCACCGACAGCCACCAGATGAATTACTTACTACTACTT
TAGTATGGATCACCCAGTGCCCCACACGTACAGAAATGTTTAAAGCTAAG
TAATTCGCACCAGAACAATGAAACAAGGATATGTGGGACGTAAAAATAAA
AGGCTACTCGACCACTCTTTTTCTCATAGTTCTCACAAAGGAAAGGATTT
GTGCCGAAAACACTGGAGTTGCAAACATTCGATACTTTTTTGAAAGAACA
CTTAGCTCAATGGTTTGCTGGTGGATTTCTGGATCTTCACCAAGTCACGT
GGGATGAAACATCTGCTGACCTCATGGAAAAGGTTTGGTATTTATTTAGC
TCTTCATCGTCAGGCTGATATTATAACAGTTCGTTTTCACATATTGAAAA
AAACTTTTTCCCGAACACACTTTATAATTTTGTTTTACGGGGATTTCATT
TTTCAATTTTTCCTCCAAGTGAATAATTCTTGCTCAATATTGATCAATTT
CATTACATCCCAACACTTCGAATTTAAATATATTCTTCTCAAAATTAACC
CGTCAACTTCGAAAACTCCTTCAACAATTAAAGGGGTTTCTATGTGGAAA
ATTGACTACCTTAAGTGGATTAATTTTGGCGTGGATTTAATTTGGCGATT
TGCCCTAAATGAGATTTTTGGCGGGGATTTAATTTGGCCAATGTTAAGAT
GTTAGGCACTGGTGAACTAAATATTACGAAGTATTTTACTAAAAAAATAT
TATCCATATAAAATTATATCCTTCAAAAAATTTGTTGAATTTTGCGATTT
TCGTCAAACCTCGCCAAACTTTGCCAAATTCGCCAAATTTAAAATTCCGG
CCAAAATTAACCCACTTAAGGTATAAGGCTCTTTAAATTACCGATGGGCG
TTCCCATTTTGAGGAAGCCATTAAAATGAACATAAAAAGTTTTAATAGTT
TCGTTATTTTCAGTTAATGAAATACGAAGCAGTACATCCTATTGTCAATT
GGAATGATCTGAAGAAGCGTGCAGCGGTTGGTCGAAGGATCTTCATGTTT
TCACATCGTTTGATGCCTGGTGAACCACTTGTTGTATTATATGTGTTGCT
TGGCAACCATATACCAAATAATATACAGGTTGTTCGAGTCAAAGTTTCTG
ATTACTGAATATAGATGGATTGACGAATAAGAGTATTCGACTCCCGGGGG
TGTACTAGGTTTGTGAGATGACGGGTATGTGCCGGCCGACTTTTGGCGGT
GGCGTCCTTGGAGGGACTAAAACTGACCTTTAAAGGAAAAACCAGAATTT
TCATAANACCGCCCGACTTTTGGCGGTGGGGCCCTTGGAGGGACTAAAAC
TGACCTTTAAAGGAAAAACCAGAATTTTCATAAATTATATGAATGATGAC
TGATTTTACAACCCTTAAGAAGACTGGAATTAGATTTTGTGATTTTTACG
ACCCTTAGTGGGATTTCGAAGATCGAAAAAAGGCACACTTAAAGGTAGCA
CATACCCGTACCTTCCTTTTACCTAAGTGACCCTACCGAAATTCGACTGC
GGTGCATAAGGGCGGTTCAGTCACTGGCCGCCTCTGACAAAGAATTTAAA
AATATGGTACTTGATGGTCTCTCTGCTTTGTGCTTAAAACGTTTTGGGAT
ATCCACCAAACGGAACAAAGTGAGAAGTAACTCCCATCAAACGATGAATT
TAACACATAGTATCAAGTGTTAAGTTTAAGAAGAATTCTGCGTGTCCAGG
GAGTACAACACGTGTCCAAGAAGAAGAAAAGTCCAGAGGTCGACATTAAA
AACATAAAATATCTTCCACCTCAATTAGGAGATTTTAATATAGAAAGAAA
CACTCATTAAAAGCAGTCTTTATTCTAAATTTCACTGTTTTTTCTCTTTA
AGAACGTCTTGAGTTCAGAACAAAGCGTAGAGGACAAAGAAGAAATAACA
ACAGCAACATTTTATTCTATCTCATCCACGCAAAGAGGTTGTTTTATGAT
CTTTTTTGGAGGGGTCAAGAGGTCTTCAATACCGAAATTCCAGCAATTCT
ATCCCTAAATACCGTAATACCGGACAAAATTTAACAATTTCTTCAAAAAA
AGGTTTATCTGTTTAGGCTTTTCAATCCGTTTCAGTCCATGCTCTTATTT
AACTTTTCACGAGCAAAAAATAAAGGTCTCAATTCTAGCGTTAGAATGGA
TTATGGGATAAAGTGAAAAATAACAAGAAGCCTGTTGGCTTGAAGGCCCA
GCGAAAAGTAACGTGTTGAAAACGAGCGTGCAAAACAGCAAATGTATGAC
CCTGTTGACATGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCGGTTCAGTCACTGGCCGCCTCTGACAAAGAATTTAAAAAT
ATGGTACTTGATGGTCTCTCTGCTTTGTGCTTAAAACGTTTTGGGATATC
CACCAAACGGAACAAAGTGAGAAGTAACTCCCATCAAACGATGAATTAAC
ACATAGTACCAAGTGTTAAGTTTAAGGAGAATTCTGCGTGTCCAGGGGTA
CAACACGTATGCCCAGAGAGTGAAGAAAAGTCCAGAAGTCGACATTAAAG
ACATAAAATATCTTCCACCTCAATTAGGAGATTTTAATGTAGAAAGAAAC
ACTCATAAAAGCGGTCTTTATTCTAATTTTCACTGTTTTTTCTCTTTAAG
AACGTCTTGAGTTCAGAACAAAGCGTAGAGGACAAAGAAGAAATCACAAC
AGCAACATTTTATTCTATCTCATCCACGCAAAGAGGTTGTTTTATGATCT
TTTTTGGAGGGAAGGGTCAAGGGGTCTTCAATACCGAAATTCCAGCAATT
CTATCGCTAAATACCGTAATACCGGACAAAATTTAACAATTTCTTCAAAA
AAAAGGTTTACCTGTTTAAGGCTTTTCAATTATAATCTTTTATGAAATAT
ATCAAAAGTGTCTCTAGAAACGAAATGGTAATGCCGTTTTCGTGGTATTT
TCAGTTTGGTATAAGCTAAGTTACCTTTAAACGCTTCTACTTTTGCGTTA
GCCTATACTAGACGTCACCCGCGTTTTTTCTACGCAATTAAGAAACGAGA
TGAAAAATCCCGTATTTTAGTGAGGTGCTCGCTACTTTGGCGTGGGCTGC
ATGTAATTTTTTCTTTGATTTTAAATACCGCAAATCTGTTGATATTCGAC
TCTTATCATGTCCATGGTCTTATTTACAAGGTAAATTTTTAGATTTTACC
AGTCATGGTCTCAAAATTATCGATGGTCTTCAAGTAATTAGTAAAAGGAA
GTAAAAGGTGTGGAAAGGAACAGCTATAAGGAAAATAGGTCAGCTAAATC
AGCTCGAGAAGATTTTAGATGCATTTGAAAATATATTCACACACATATTT
CATGACGGCAATATTCTTACGATATTCTTAATTTTTCAGCTATTTTCATG
ATGGATATTCTTATAAAGTGTATTCTTAAAAAAAAGCGTGTATATATTCA
ATTTATTTGACTTCTTTCACCGACAGGTCTTGATGGGATCGGTCTCGGCA
ACGTGTTGATTAAAAGAGTTGTGGAAGAGTTACGTCGTGAGTTCCATAAC
ATGAAAACCTTCGTTACTTTATCCCCAATCCCTGGATTTAAACGATGGTT
AGATCAACAGATCAAAAATCATAAAGGTAAAAGATTTAAACTTATTTATA
CTGGTTGATTCCCTTTCGACCTTATAAGTTAATTCGTATTGATAATTTCC
CCGCCGATATTTCAAGATGTCCTCGACTTCTCTGTAAACCCCCCCTCCCA
GCGGGTTTGGGTGAATGAGAACTTCGACCCCCGGGACACTTGCCGTATTA
TGCTGGATATAATGTTTTTCAGTGTTGATAATCCTACATTCATCCTACAT
TCAATTTTAATCTTTTTTTTTCATTAGAAGGAGTTTCATCGCGTTATGGA
GATCTCCTTGAAAGTTCTGCTATGGTATGTCAAACCATTTTATAAAAATA
TAGTATTAGTTCCCGTGTTTTAGAGCATCTTTTATCTACATCGATGTTCC
GTACCCACATTTATTGATTTATTTTTATCTTTTCCTTTAGTGTCATACTT
TGATACGAATGTAGATTATAATTTAAATAACATTTTAATGGTCATTCTGT
ATATATTTTTCGTGTAAACAATATTTCGACCTGCTTGGTGCAGGTCTTCG
TCAGGTCTAAACAATACAAACGGTTGAAGGAGCTACCTTGACTTTTTTTT
GAACTGAAGAGAACAAATTTGATAGAAAAGTGCGAGAAGCATTGGAAATC
CAATTCCGTCAGACGGCGCCACATAGTGACCATGGTCTTAATTTAGACGA
TGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCGTTTGTATTGTTTAGACCTGACGAAGACCTGCACCAAGCAG
GTCGAAATATTGTTTACACGAAAAATATATACAGAATGACCATTAAAATG
TTATTTAAATTTTTATCTTTTATCTTTTTTCACACCATTTTGGCTGGTAT
TTGACATCAAACGTCGATTTTCCGCCCAAGGGAAAGATCTTCAAAGGGAG
GGTAAAGATTTTTAAATCAGATTTATAATAAACTTGCTAAAAAACATAAT
TTATTGATAAAAGGGAATCTACTGAAAGCTTACTTTTTAAAGACAATATT
ATTAAAATGAGGGGAGAGAATGACGTCGAAAGTTAAAATTATCGTTGCAA
AGTACTGAAAAAATGACAGTGAATTTTGCGAAAAAAAGGAAATCTTAAAA
GGAGGGTTGAGCTATCTGCGCATTTTGGGGGTAGCAATGACTGTAAAAAG
GTTTTAAAATATCTTATTTTCAATCTTTGCATATACCAGGAACACCTCAG
AGATGATGGCTGGGTGAAGGATATGAAAAAATGTAATCAATTACAACCAG
TTCTTCAATCGTTATGTGCAAGGTAATTTCTAGACGATGGTATCAACTGA
AAAATCGGTACATGAGGTTAAAGCCGCTCATGGCTGTAGAGAATCTATGT
TTAAGTGAACAGTTATTAGGCAACAGCTACATCTAGAAATAATCCGTATT
TGTAGATGTAGTTTGTTCCCTTCTTAGCCTATACTATAGTCAGTCTACAA
TCAGCGCCGAAATATATCGGCAATTTTGCGTATTTTAACGTTTTTCAGAA
TTTAAAGGTTGGGCGAGAATTGCAGTTTCAGTACTTCCACTTTGCTTCAT
TGGATTTTTCGATTTGGGAGGGGTTGTGTAGCTTCCAGGCTATATTCTCA
GCCTTATTGGAATATTTTTTAGCTATATATATTTTAGATCCTGAGATCCG
ATGTCTTAAGTCTAATGTTAAAACTGAGATTTAAAACTCTACTTCCAAAC
TGTACTTCAAAGCGCTTAAAAATCACTTGCCTCAAAATTTTGAAGGAATT
CCCCTTTTGTGCCAAATATTTCGGCGCTGATTGTAGCTAGGCTACACTAG
GCGTGTCTTGCGTGGAGGAATCAGGGTCTGCTAGAAGGTTCTATATTTTA
AATCAATTTCCCTGAATCGGTCAATATGAAGTCTGCACACAGACCGGATA
TCTACGGCTAATTTTAAAATTCATTGTCGTAGAAACGATAAACATGAGAT
ACACCTTGGTACAGAATAGTCAATATGATGTTATTGCGAAGGTTTCATGG
ATATGTTATTTGGTTAATATGTTAAAATTATTTGGTTTAAAAATTGATTA
ATTTTTTTTTCTAGATATTTGTTGCACGAGAAGCGACGAGGCTTTGCGAT
GGACCCTGTCGGTAAGAAATTTCTTTTCATCTCTCATTCTTTGCCACAGA
AAGTAATGTAATGTAAAGTACCTTTGTGGTCAAGGCCCTTTTTCAGACGC
TAAAATATCTGACTTTGTCGATTTGTTCTTTTAACCACTTTTCAAGGTTG
TTTTTTTCGGAGAAAACGGTCTAAAATTATATTTGTTAGTGTACAATTTT
TTTTTCTGTCAGGGACCCATTTTTCGAACTCCAGGAGAACGCCCTCGGTA
GCTGTTAAGGTCAGTCCCCCCTGAACTCCTTGACGCGTCACTGATACGGA
AATTTAACTACTTTTTCAGCAAATTTCCATTTACGAAATGGTGCATCTTT
GTGGCGCATCAACTGGCTTGCAAACACTGAACCTCGTGGCTTGAAGTCCT
CACATACGCTCATGGTCAACTATCGATACGACTTATCACAGATTGAAACG
AACAATTTAAAGTATGTAATGGGCGGAGAAATTACCGCCTCTGAAAGTGT
TTTGGAAATTGTGAGTTAGGTGGAACTTTACGATTATAGAAATTGATGGC
TTTTGATTTAGAGTACAAAATTTACCAAAATGTTGTAGATTGAATTATTT
TAAAGCTTTTTGGCCCTTGAAATCGAAGCGTAACAAATTTGCTTTAAACA
AAAAACGAAACTCTGCTGTTATCAATAAACCAAATATGAAATATTACAAT
TTCAATAACCCTTTAAGTTCCAATCTTTTTAAAAACGGTTCGACCTATTT
CACCTTAACGTAAAATGAGTAGTGTCTAAATGTTAAATGTATATATTCTT
TAAAGTAAAAAAGAAAGGGGACCCCTTCCCATTGGAAAAATTATCGTATA
AAAATATCGTCCCCGGTGGAAAATTATCCTCTGATTTTTGTCCCCACTGA
AAATAATCAAATAAGCTAATCCTCACTGCATAATATTATGCTATTTCCCC
ATCCCCCTGAATTTTCTGACTTGAAAACAAAAGAATTCAAATCACCAGCC
ATAAAAAATATGGAAATATCGATCCCCATCGAATTTCAGGCCGTTATTTT
TATCCAGACTGGCTGAAAAAATCCTACCGGGTCTGCGATAGAGCGTATGT
GTGTCGTTTTTTTTTAATTATTGATTTTCTTTTCTTTTGATTTGTAAAAA
TTAGAATATATTTTGATAGGTATTGTTTTACATGGGAAAATTTTATGCAT
ACATTTAGTTAAAACTGCCATATTGCTATTTCAAACTTTTTGTCTAATAT
TGCTTAAAAAAACTCACATTTTAAATTTGAAGTAATGGTCTATTCGCTTT
AACTAGGCCTTTAAATAGGCCCATTTCGCGCGCTTTTTATTTTCGCGTAC
GTATTCCGCGCCAAAATTAATGGAATTAATGTATGTGAAGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038375XLOC_038375Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061180-exon-scaffold_354-1575043694:632138..632249TCONS_00061180-exon-scaffold_354-1575043694:632138..632249Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1575043694:631618..631665TCONS_00061180-exon-scaffold_354-1575043694:631618..631665Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1575043694:631087..631182TCONS_00061180-exon-scaffold_354-1575043694:631087..631182Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1575043694:630308..630448TCONS_00061180-exon-scaffold_354-1575043694:630308..630448Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1575043694:629268..629420TCONS_00061180-exon-scaffold_354-1575043694:629268..629420Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1575043694:628472..628636TCONS_00061180-exon-scaffold_354-1575043694:628472..628636Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1575043694:627613..627697TCONS_00061180-exon-scaffold_354-1575043694:627613..627697Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1575043694:625324..625473TCONS_00061180-exon-scaffold_354-1575043694:625324..625473Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1575043694:625026..625072TCONS_00061180-exon-scaffold_354-1575043694:625026..625072Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1575043694:623828..623910TCONS_00061180-exon-scaffold_354-1575043694:623828..623910Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1575043694:622989..623035TCONS_00061180-exon-scaffold_354-1575043694:622989..623035Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1575043694:621607..622680TCONS_00061180-exon-scaffold_354-1575043694:621607..622680Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1510915933:632138..632249TCONS_00061180-exon-scaffold_354-1510915933:632138..632249Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1510915933:631618..631665TCONS_00061180-exon-scaffold_354-1510915933:631618..631665Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1510915933:631087..631182TCONS_00061180-exon-scaffold_354-1510915933:631087..631182Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1510915933:630308..630448TCONS_00061180-exon-scaffold_354-1510915933:630308..630448Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1510915933:629268..629420TCONS_00061180-exon-scaffold_354-1510915933:629268..629420Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1510915933:628472..628636TCONS_00061180-exon-scaffold_354-1510915933:628472..628636Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1510915933:627613..627697TCONS_00061180-exon-scaffold_354-1510915933:627613..627697Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1510915933:625324..625473TCONS_00061180-exon-scaffold_354-1510915933:625324..625473Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1510915933:625026..625072TCONS_00061180-exon-scaffold_354-1510915933:625026..625072Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1510915933:623828..623910TCONS_00061180-exon-scaffold_354-1510915933:623828..623910Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1510915933:622989..623035TCONS_00061180-exon-scaffold_354-1510915933:622989..623035Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1510915933:621607..622680TCONS_00061180-exon-scaffold_354-1510915933:621607..622680Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1491911889:632138..632249TCONS_00061180-exon-scaffold_354-1491911889:632138..632249Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1491911889:631618..631665TCONS_00061180-exon-scaffold_354-1491911889:631618..631665Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1491911889:631087..631182TCONS_00061180-exon-scaffold_354-1491911889:631087..631182Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1491911889:630308..630448TCONS_00061180-exon-scaffold_354-1491911889:630308..630448Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1491911889:629268..629420TCONS_00061180-exon-scaffold_354-1491911889:629268..629420Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1491911889:628472..628636TCONS_00061180-exon-scaffold_354-1491911889:628472..628636Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1491911889:627613..627697TCONS_00061180-exon-scaffold_354-1491911889:627613..627697Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1491911889:625324..625473TCONS_00061180-exon-scaffold_354-1491911889:625324..625473Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1491911889:625026..625072TCONS_00061180-exon-scaffold_354-1491911889:625026..625072Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1491911889:623828..623910TCONS_00061180-exon-scaffold_354-1491911889:623828..623910Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1491911889:622989..623035TCONS_00061180-exon-scaffold_354-1491911889:622989..623035Clytia hemisphaericaexon
TCONS_00061180-exon-scaffold_354-1491911889:621607..622680TCONS_00061180-exon-scaffold_354-1491911889:621607..622680Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:621607..632249 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0736776	0.44912	0	0	0	0	0	0	0	0.0641456	0	0	0	0	0	0	0	0	0	0	0	0	4.16858	0.65426	0	0	0	0
Blast
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BLAST of TCONS_00061180 vs. Swiss-Prot (Human)
Match: DCMC (Malonyl-CoA decarboxylase, mitochondrial OS=Homo sapiens GN=MLYCD PE=1 SV=3)

HSP 1 Score: 289.271 bits (739), Expect = 2.769e-88
Identity = 162/402 (40.30%), Postives = 231/402 (57.46%), Query Frame = 2 
Query:  125 DFVSHYGTLKNMENKSRFFQLLSEKLGCNNEDI-QNNMKLLKESMDTRDK-LTHRHRHQLSASLTPTYKQLFDDVSKLEDGVGFLVDMRKDLLFSQRKGFVPKTLELQTFDTFLKEHLAQWFAGGFLDLHQVTWDETSADLMEKLMKYEAVHPIVNWNDLKKRAAVGRRIFMFSHRLMPGEPLVVLYVLLGNHIPNNIQNVLS--SEQSVEDKEEITTATFYSISSTQRGLDGIGLGNVLIKRVVEELRREFHNMKTFVTLSPIPGFKRWL----DQQIKNHKEG----------VSSRYGDLLESSAMEHLRDDGWVKDMKKCNQLQPVLQSLCARYLLHEKRRGFAMDPVANFHLRNGASLWRINWLANTEPRGLKSSHTLMVNYRYDLSQIETNNLKYV 1276
            DFVS YG L     ++     L+   G ++  + + +  +L      R+  +  +   +L  +L P Y+ LF  +SKL+ GV FLV +R DLL +Q    V +  +++  +  LK  L++WF+ GFL+L +VTW  +  ++++K+ + EAVHP+ NW D+K+R    RR + FSH   PGEPLVVL+V L   I +NIQ ++        E+K +IT A FYSIS TQ+GL G+ LG  LIKRVV+EL+REF ++  F +LSPIPGF +WL    + Q K H             +S   G  +  +    L    WV+  K    LQ  L  LCA YL  EK RG+A++PVANFHL+NGA LWRINW+A+   RG+  S  LM NYRY L +   N+  Y+
Sbjct:   70 DFVSFYGGLAETAQRAELLGRLARGFGVDHGQVAEQSAGVLHLRQQQREAAVLLQAEDRLRYALVPRYRGLFHHISKLDGGVRFLVQLRADLLEAQALKLV-EGPDVREMNGVLKGMLSEWFSSGFLNLERVTW-HSPCEVLQKISEAEAVHPVKNWMDMKRRVGPYRRCYFFSHCSTPGEPLVVLHVALTGDISSNIQAIVKEHPPSETEEKNKITAAIFYSISLTQQGLQGVELGTFLIKRVVKELQREFPHLGVFSSLSPIPGFTKWLLGLLNSQTKEHGRNELFTDSECKEISEITGGPINETLKLLLSSSEWVQSEKLVRALQTPLMRLCAWYLYGEKHRGYALNPVANFHLQNGAVLWRINWMADVSLRGITGSCGLMANYRYFLEETGPNSTSYL 469
The following BLAST results are available for this feature:
BLAST of TCONS_00061180 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCMC2.769e-8840.30Malonyl-CoA decarboxylase, mitochondrial OS=Homo s... [more]
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