TCONS_00061172 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061172
Unique NameTCONS_00061172
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1287

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061172 ID=TCONS_00061172|Name=TCONS_00061172|organism=Clytia hemisphaerica|type=transcript|length=1287bp
GAAGAACATCATGTTGAACGACCTGAATACATAGCACATTATTTGGATCA
AAGACTGAGAAAATGCTTCCGTCAATTTGTATCAGTTTGAAGGTGGTTCA
AACAGAAATTTTATGAATGGTGGAAGTTACATTGCCAACGAATATCTTCC
CATAACCACAAGTTATGATTTTGACGCTCCATTGTCAGAAGCTGGTGATC
CTACAGAAAAATATtggcaaattcaaaaagtcatttcCAAATATGAGAGA
CTTCCATCTGGACCGCAACCAGAACCAACAAAGAAGTTAGCGTATAGAAA
GTTGAGAATTTATTCTGTGGAAAATGAAGGAAGGACTTGCTTCTCTGAAG
CCATCCAAGACGTTCGAAAGGGATTGCTAAGTGGAGTCATACTTAGTGGA
GCTCCAATTACCGGTGACTGGGAGCATTTCCGGTATGGTATTTATCGCCA
AAACACACCGGAAGCAAGAGAatcagaagaagaaaatcacTTGCTGGGTG
GATTCGCCGCCCACCGCCCGTTTGATGAACAAGCACCAGTCATTGTGAAT
TCTTTTACAGAGCATACACCCAAAGTACAGAAATTATTTACAAGCACACA
AGCACAAGATGGTTGGGTTGGACCACCAGCGTTGTATGGAATTAGCTTTG
TATTGGAGGAGGTTGCAGATACTTATCTAAAGCTTGACCAATGGGGGAAG
GGATTTGTAACAATCAACGAAGATCACTACTATAAATATTGGACAAGTTC
AATTCCACAAAAGACCATCTTTATACCCAAAACAAACCTTAAAGTTGGTA
ACAATACAATCGTACTGACGGAATTTGAACGTGCACCTTCAAGTATGGAT
GAAGCCTATATTGAACTTGTTGAAAAGCCAGTTTTCGTGTGAaacaatta
ttttttgtttttattcagtGTGCTTTTTAGAAGAAAAACAAGACACCCTT
ATCTCAATGACCCGCTAAAAGTTTTGACCCGGGCTGGctatgaaataaat
aaatttgaattgatTTAGAATTGATATTTCAATAACTCACTCGATTTTCA
CCGTTGAAGAAATAGTTTTCCATATCAAAACATTGAAGAGTTTGGTTTTA
TTTCGACTTTGACCAGTCTTACCTACGGGTTCTATTGACCCAGCGAGGGT
CAAAATTTTATACAAAATGTTGTTAATTAGCGTGTTGGTATATACAGTAG
ATTTTGTAAACACACACGAATTAGTGTATTGATATATAGATCAGAGAGCA
GATTTCAAACTTATAAAGAAGATTAATCCAATTTCTG
Run BLAST on NCBI

transcript from alignment at scaffold_354:490163..507014-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061172 ID=TCONS_00061172|Name=TCONS_00061172|organism=Clytia hemisphaerica|type=transcript|length=16852bp|location=Sequence derived from alignment at scaffold_354:490163..507014- (Clytia hemisphaerica)
GAAGAACATCATGTTGAACGACCTGAATACATAGCACATTATTTGGATCA
AAGACTGAGAAAATGCTTCCGTCAATTTGTATCAGTTTGAAGGTAATTTG
TATCATATTATAAGAAAGCCGCGGCTGGAATGTGTATTGTATTGTCTTTT
CAGTTAATAATTGCTGTTCCATCTCTGTCTCCGAGCTTTATAAGAACACC
AAGATGCTCAGTTTATTATTGGTAGATAGTTTTTGAAATTTTTCTCTATT
TTTCTTCGCATGAATTTTTTATTGCTAGATATCTTTGAATCTGTATTCAA
TAGAACACTTGAACTAATTTTGGACATTATTTAGGGGTATTTTGTGGAAA
CAATAGTTTTTCGCCAAAATTGAAATTATAAGAACTGTATTCAAGATGAC
TATACTTTCCTGTCAGTTTGAATGATAAATTTAGAAGGTGCTTGCTTGAA
ATTTTCACAGTATTATCTTGATGTAATTTTTCATTGACTTCTAAAAAGAT
TTCACTGAAATATTGTGAAGGCATTCGAAGGCACTTTATTAATTTTTTAG
TTCTTTTAGCCCAGACATTTTTGCTTGTTTAAATTTCTTATTGTTGATCT
TTCTTTTACAATGATTTTCTAATGCAAGTGTATTATCAAGGGCATATCAT
TAATGTCTAAAATGCACTGAGAAGTAAGTATTAACGACAAACCAATAAAA
TTTACCACATTAATCCAGTGACTTTTTGTCTAAGGATTGATTCTGAAATT
GTGAAATCGTGTGCTTATAAATAACTTTCCATTTTCTAGCTTAAGAAAAT
TTAACGAATAACGAAATGGAACATAAACTTGTTTTGTGGGGCTAAGTTTT
ATTTGATTTTCGTATAGTAGAAGGATAATATTTTCAATTACTTCATCATC
TATTCAGATTCCCGATTGATATTTACAGATCTATTTTAGCTTACAATCTG
GAATTTTAGGAGCTGAAATTTAGTGATTCCATCGATTTTAAGGATTTTAA
CTCCTAATAACTAATTTAGGTGAAAACCCGAATTTCTTTCCTTAGAAGTG
CTTTTTCAAATAGTTTTCAACACTGGTGAATCTATAAAATGAGCTGATTT
CAAATATGTAATTGGTCGCCTCACGAAGTGAAAGGAGACCATTAATCTCG
GTGTTTCTCCTCGTCGTCAAGATAAAAATGTGTGAAAGTTTGGTCGCCCG
ATTTGGAATTAAATGTTCGGGGAATCGGGAAATTATTTCCCGCGTAAATT
CCTTCCCTGATTAAATGATTTCTCGAAACATTTTTTTTGCATTTCTTATC
GAAAATCACTCATCCCGAAAATCACTCATCCAATTTCCAAAAGAGACTTA
AAACTTTCCTGTGAGAGTCAGATTCTTCCACTTAATTGCTAATTATAAGT
CGTTATGACAGTCTTGGAAAGATATTTTCAATTGAAAATTTTGTGTCACT
ATACTCTTAGGTGCCAAATAAACGGGAGGGGTTGGAAAACTTTTTCAAAT
CAAGTAAACGGGGGGCCTAATTACCGGGGGGGTTGGAAAATGGACTTTTA
AAAACCCTAAAAAGGGTCAAAATAGACTAAATTTAGGTTTCTTTAGAGTA
AAACAAGGAACTTTCCTTTTGGAAGCTGGGAATTTTTTCAAAAATTAATA
AACGGGGGGGGTCCTAATAACGTCCGGGGGGGTTGGAAAATGGACTTTTA
AAAACCCTAAAAAGAGTCAAAATAGACTAAATTTAGGTTTCTTTAGAGTA
AAACAAGGAACTTTCCTTTTGGAAGCTGGGAATTTTTTCAAAAATTAATA
AACGGGGGGGGTCCTAATAACGTCCGGGGGGGTTGGAAAAAATCGAAAAA
TTAACAAGCGGGGGGGGCCGTTTATTAGGCACCTAAGAGTAAGCATTTTG
TCTGAATTTCTGGTCTAATGATGTTTTTCTCACATTAGATTTCACAAATG
TATCCAGCTCGGAACGCTAGCCTTACTTTCAAACTTTTTTTTCTGCAAAT
GTACAAAAAGAAAGAGCTAGAGAACTTCTTAAGGTGGCGGTCTACTGCCA
GATTTTAAAACTCAAAAAATCACATTTTTGTCAATAAAACAATAACGACT
TAATATTTCTTTATGAAATTTTAAGGGAATGTGTATCAACTATTAACATT
TCCAAAAATAGAAAAAAATCTAAAAATAGCCAAAGACGGGGGTAAAACCA
GTCCGGGGGTAAAGTACTCCAAAAATCTTGTGTCAGGCTTTTTGAAACAC
TGAGTTCAGCTATGAAGTTAATTCTTTTTTTACTAGACTGATATTTGAAA
AGTCTACAGAATGAATTGAAAAATTTTTCAAAATTTTTTTTCAGGGGGTC
AGAAACTCAAAAAATCGATTTTTTGAAATTAAGAATCAGCATGTGGGTGT
TGAGAAGTTACGTCCAGTTCATTTCAATGCACATTTCCATCCATGTTGCA
TCATGTTGTACTTGGAAATATCTCAGATACATTTAAATCCACAACAAAGC
ATCATGTCAGTCCCTAAAAACACACCGTTAATGTCCAAAACAAAATGGCG
ACAACTTGAAAGTTTTTCACAGAAATCCAAAAAAATAACCAATGTGCAGC
AGCTTGTTAGCTTCTGCAAAGTTTATTCTCCATCGCAATCAATCATTTCT
ATCAAAGAGATAAAGTTTTTGTCCAAAACATGTCAAAAAATCTGCAGAAT
CATACATGCCTCCAGCCAGTCAAGGACACCTTCAAATTAGCCTATCATAG
GCTGGTTAGACTATTTTATATAGGCTATTTAGCCGAAAATCGATAAAAAC
CTCAATTTCTGACGAAATATAAATAGTCGCGTCTATTTTTCACCATTACT
TCATTGTCCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGGAAACAGAAATATGAATA
AATTTATTATCCATCGGCTAACTAACCGATTATAGGCTAATTTTCTGATA
ATAAAGTGCCGTGTACAAAAACACATGTTTGTTTAAAAAAAAATTTTTTT
TCAAAAAGCCCGATCTCCTTACCCTGCGCATGCGCATTAATAAGATAAAC
CTATTTTGAGTGAGTTCAGAACGAAAGGCAAGGTAAAATTTTACGTCACT
TCCGGTCGAAAATATCAAATATTTTGAACTTGAAAAGACAATATTCGAGA
TTCCAAGCAATTCGTAGAAAAGTTTTCTTTCATTCTAGCCGAAAATCTAC
TTTCGTTTTTAATGAACAGAAAAATACAGGTTGGTACAGGGGCAAAAACG
GGTAACTTGAGTTTGGATTTCATGAATCTAAAAATTATATTTCCAAGTAT
TCGTGAAAACCATTATTTTCATGAAATTTAGGGGTCAATTTTCGCTTAGT
AGCCTATCTTTGAGACGCTGTATCTTCAAAACTACGTGAGATATCAAGGT
GAAATTTTCAGGGTCTTATTTTCTTGTGTGATAGATCATTTGGTCAAAAC
TTCATCAAAATCCAAGAGGATGAGGTATCACACCCTGAAGACTCTTAAAA
AATGGCTCTTAATATCATCGCAGGCAGTGAAAATTATGAATTTTTTTTGC
ATATAGAAGAATAGATTTGATCAGTCTAGGATCAAAACTGTCCAGAAATG
GACTGTCAATCATTAAAATCAATTTTTGAGCCTTCCGGTACATGGTGTGG
CCTGTTAAAGCCTTGTTGCTAGGGTGTTGCTAGGGAATTTTCGGAAAATA
TAGGTCATCTTTAAAATTCATTTATTGAGCCAAAAATGAATTCTCCACGA
CAGATTTTCGATATTTAGTAGTTAAAGGATTGATCTTTCAGGATCTGAAA
AAAATATTTAATTTGGAATCTCGGGCTGGGAATAACCGAGAATCAAATCC
AACCGGTATTTTCAAGCAGTTCAAAACTTTGGCTTTAAATTAGCCTCCGT
CTCGGAAGAGGACTGGGCCCGAATTTGCGGATGTTTTCACAGTTTCACTT
TCGTTTTCGGCTATACGACAGCGTTTTCAAGCAGAANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGGCTCAAAGTTTTAAA
AACAGAGCAAGTCAGAGCTTCAATTCAGTAGGTATAGAGCTTTCAAAATT
TGAAAACAGACACTGCATTGGTTACTACAAGACATACTATCCACACGGTT
TTTTCGATTCATGAAAAAATAAAGTATTTATCAAAAAAAGGTTCTCTTTT
TTTTTGGTAATCAATACACCTTTCCCGTAATTCAAATTTCTCAGAAATGG
CCCGGGAAAATGTGCGCTCCACCGTTGTGTATAAAATTGTTTGGGAGGTA
AAAAACGCGTTTTTGCCTGCGAGGGGTTAGGGAAATTGGGATTTGAGCCT
CTAAATTTTGACAGCGACCTTCTTTTGGCAAAATATTTTCAGGGTGGTAT
AATATCATGTATAGGTTGAACATACTAAAATTTGAGGGGATTTTGTTGGA
CAGAACTTAAGAAAATCTAAAAAAACCAACTTTCCCTAAGGGAACGCAGG
CAAAAACGAGTTTGTTTACCTCCAGAGACCAAACGGTGGAGAGCATCAAA
ATAATGCGCGCGCATTAGTTTTACGATACGGGAAAGGTGTATTCCAACAA
ACAACAATCAATATAACAGTTTTTTGAAAACCATCCCACAGTGTAAACAT
TATCAACCAACTAAACCCACACCGCCAAAATTGTGAANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGACAGACGGTGTC
AATCGAACGAATCGAACGCCGAATCAATTGAACGCAATTGAACGCAATCG
AATAATTGCAATTCGATTGTCGAACGCAATCGAATCGCAATAGAATATTA
CCCAGGATTTGCTGTTCGATTGCTTCGATTATGTTCGATTGTATTCGATT
ATGTTCGATTGATTCAGATTTTATTCGCTTTGGTACGGTACTTAAGCACT
CGGCCGCCCGCTAAAAAGCCCTAACGGAGTGATCCAATTTAATTTAATCA
AACTCATCAAACATAATCCTAATCGAACGAAATCGAAGATTATTCGAATG
CAAATGACAATCGGACATAGTTCAACTATCAATCGAACCAATCTAACCTT
ACTCAAACGCAATCGAACACAATCGAATATTACTCAGGAATCGGCCGTTC
GATTGAGATTCAATTACGTTTGACAATCGAATCGCAATTATTCGATCGCG
TTCGATTACGTTCGATTGGTTCGATTGCGATTTTTGTTCGAAGTTGTTCG
ATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGAATCATGA
TACATTACTCACATTTCACTGGATGCATTTTCGCTATGAAATTATCCGCA
AAATTTTCTGACCGCGTTCTGAGACGGAGGCTAATATCCGCCATTTTGGA
AAAAAATTTGAATTTTTAATTTCGCATAGCGAAAGTATTACAATAGGCTT
TCGCGGCGGCGGTGCGGAAAAAAAATTAGAAAACGAAAGTACTTGATACG
ATGGACGAACTCACTAAAATCAATTTACAAATTACACGCTCGTATAACCA
TGGACGATTTTCGCAGGTTTTCTTTGGATTACGTCATAATTCTTTGTGTC
TTTAGCTTCACAGTTTTGATTTTTCTTTATTTTCTTATAAGCATATACTT
TATAAGAATCAAATCAATAACTCTTGATAGACGGTGACATACCTTTCGGT
AATTAGTTCTTACAAGGTAAACAAGGGACGGCATACAATATGAGCATATT
TATTTTTCTTATAATTATAAGCATTTACTTTATAAGAATCAAATCAATAA
CTCTTTATATACAGGGATATACCTTTCGGTAATAAGTTCTTACAAGGTAA
ACAAGGGACGGCATACAATATGAGCATATTTATTTTTCTTATAGGCATTT
ACTTTATACTAGTCATAGCTTTCACTAAATGCCCACGCAGAAGATCATGT
AATGCACTTATAAAGCTTTTACTAGTAATGCTTTAAAAATTAAAGCATTG
AAAATAATCAGGAATAATTGATTGATTTAATTATTGAATGATTGATTAAT
TGATTGAGGCATATGCTTGAAAAAAAAATCATATTCCATTAACACAATAC
TTGAAGAATTCATGCAGCTTGATACATGTTTTTTTTTTATAAGCAAGTGT
TTGCCCCTACATCAGGCTCGCATTATGCTTATCATTCTATTGTTCTCAAA
CAATAGAGCCATTGTTTAGGTACCAAAAACNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNACCAATCCTAGTTAAGGCCCAG
GCTCCACTTGCGTACGCTGTGATTGCACTTCTCAAGCAAAATCTTCTATG
TTGTTGCAGACGTACAGTCGAGAAAAGTTAAAATGCGCCTAAATTTCTTT
TCAAGTGCATAGTACTTTTTCATGATGCAATCTTTTCTCCAAGCTGAAAG
GATTGAATCCATTAAGATGATCGCAGCGCAGACAATGAAGAGACGTGCCT
TCAGGAAGTTAGACTTTTCGAGTTTATAGCTAGCTATATACTTTCACTTT
ATGGTGTTTCTGTATGACTGCCTGTGGACCTAGTCTAGCCACTGTTAAAT
GCCTTCAGGAAGGTTTCTCCTAACTTGGAAAGCCAGAATTGGAGTTATTT
CACCAAACCACTGGAGCGTAAGTTATTTAGGCTATTACAACTGCATGAAA
AAGTTGAACGTGCGCATGTAATTTGTAAAGTTAAACGAGTAAACAAACTT
TTTTCAGGTTTTTGAAATAGATTTGAAGACCAAAAGAAAAAGTTTGTTAA
CATTGATTGACATTCAACATTCATTCAACCACGTTTGGATTCAACTTTAC
ATATGCGTACATCATCAACTTTTTTGTACTTTGCCGATATCTTGTTTTAC
TAAGTTAAGAAGGACTTTCTCGAGTTAAGACCATATGATGGTATTTAAAG
CTCAAGAAGCCCTATAAACAATAAAGGTAGTTATTAATAAAATAACAGAC
AAAAATAAATTAGAGTCTGAACAAAAAATATCAACTGTACATTTGAAAAC
TTGAGCAAATTTATTTTAAGATTCCGGAAAAAGAGTTTAAATCATTGCTG
AAGTGAACTTCTGACTAAATTTCAGTAGTTAGTATTCAGTTTCAAAGACA
AGAAACTAAATTTGACATACCAAACACTTTTTCCAGTCAATGAATCAGCT
CATCATTATAACCAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTATATCATACACCTGT
TATAATTTGCATTTATAACACTCGCTTCAGCTTTTCAGTGGTAAATCAAA
ACTAATAACATGTAATATGTAATAATGGTAATTGCATATAATAACGTAAT
TTTTTACGGAAGAGACTAACTACGGGGATGCTTGCGCGACAAAACAAAAC
GCGCAAACTTTCGAGATTCCAGTCCAATATCTATGCGTGAAACTATGAGT
GCCTCCTCGTCGCTACGCTCCTGCGGGGGCAAAGAATCAAATCAATAACT
CTTGATGAACGGTGATATACCTTTCGGTAATTAGTTCTTACAAGGTAAAC
AAGGGACGGCATACAATATGGGCATATTTATTTTTCTTATAAGCATTTAC
TTTATAAGAATCAAATCAATAACTCTTGATAGATGGTGATATACCTTTCG
GTAATTAGTCCTTACAAAGTAAACAAGGGTTGGCGTACAATATGAGCATA
TTTATTTTTCTTATAAGCATTTACTTTATAAGAATCAAATCAATAACTCT
TGATAGATGGTGATATACCTTTCGGTAATTAGTTCTTACAAAGTAAACAA
GGGTTGGCGTACAATATGAGCATATTTATTTTTCTTATAATCATATACTT
TATAAGAATCAAATCAATAACTCTTGATAGACGGTGACATACCTTTCGGT
TATTAGTTCTTACTAAGTAAACAACGGACGGCGCACAATATGAGCATATT
TATTTTTTATAAGCATATACTTTATAAGAGTTCTTAAAAATTAAACAACA
ATAGTTCTTAAATTGGTCTCATTTTTTTAGCGATTTTAAGCCTCGTTGTT
CTTGTAAAATTGTTTCATCAAGGCTCGATGTAAAGTAGATTTCAGATTAG
CTTCAATCTCTACTTCTTCTTTTTTCCTACGTAGTTCAAATTGTAGGCGA
AATTTTCGACTTCAAGTCGTCTTGTTTATTTTATTTTTAGAAAATGTTTA
TGGTCTTGTGTATCTGTGCAAAATTTCATGTCATTTGGACCTACCAATAA
GGAGTTATAGCAATTTGGAATTCTGGTCTGTAAATTACCGGTTTGTATTT
TAGACAAAGTTTTTGAAACTTCAAAATGCGATATCTCGGGAACGGCTTGA
GCTCTGAGGCTCAAATTTTGGAATTTTGTTCCACCCATGAACCCCCACAA
CATATCTGAAAAAGAAAAAAATCCAAGACATCAATGATCCCACTTTAGAT
GATTCAGGGATTTTCTTAGGTGCAATTGCTCTTAAGTTGATCTCACGTTA
ACAGCTTTGGACACGACTGGACTGGCAGTATATTGACTGGAAGATTTAAA
TGTTAGCAGCTTTGAGCTACCATATTTGGCACATTTGATTAAAAAAAACT
ACCCGGATGTGAGATTGTGAGCATTGATTGGCTAAACAGATTGTTTTGAT
CACGTGCTCACGGAAAACAGAATGCTGGAAATAAAACGCCCACACGCCAT
TATTTCGCCCGAAAAATTTTCCGCCACGCACACAGAAAGGCTATTGTAAT
ACTTTCGCTAGGCGAAATTAATAAACTAAAGAAAAATGTTCTACCGGTGC
TGTGAGACAGGTGTGTTTGAATGATGTCATTTAGGTTAAAATGTTGAAGT
TTTTAATGTGATAATAAATGTGATCCTGCTTACAGGGAGAAATTTTACAC
AAAAACATGTTAAGGCCACTTGAAATTTGAGATTTAACTGTAAAGTGAGA
AGGCCCTTATAATCATTTCTGCAACACTTTATTTTCATTAAATAAGTACA
GCTCATCTTGGTTCAACAATACTGTTTTTAAAATCAATGTCTATTTTATC
AAGGAAAACGTATTTTATGGTGTCAGACTTGGCAAAAGTAAATCATGCTA
ACTTTGCTTCTCCTGGTCCTACAGTTGCATTCTCTAACCGGATATCCACT
GAACAACGAGAGATCTTTTACAATCGATTATGAGCACAACACATTCTTGA
AAGATGGAAAACCATTTCGTTACATCTCTGGTAGTATGCATTATTTCCGT
ACACCGCATCAACTTTGGGAAGATCGATTCTATAAAGCGAAGATGGCTGG
ATTAAATGTCATTCAAACGTACGTGTCAAGCTTTTCACGCTTTTTCATAA
GAATGGTCATTTTTCCATTTCAACATTTCATTTTGTTGATTCAGGCCCTC
CAAACGACAAACTTTCTTTCTACGCTCACTCCCCTCCGCACTCCCCCCTC
TGTGATATCGTTCCAGCCCGGTACACAATTTCGACCGTAGCCACCAATTG
CCGCGCGGGCATATTTTGTCCGCTTTATCCCACTAAATCGTCCCAGTCCT
TTTTTCGCAACTATAGAGAAATGTGTCAAAAAGGATTGGATTGAGTTTAG
GGGGATGATTAAATAATTAAGTGGCACGCGCCTAACTGCGCGACTACGGT
CGAAAAGGTGCATTGCCAATCTAATTATCTGGCCTCTCAGTTATCAAAGC
TGTTTAAAACTGTTTTTGTGACTGAAAGAATCGAATTCCAAATGTGTTTT
CCATTTACAATTGACTCTCGTTAATACGAACTGGCACGGGGAAAATTGAA
ACTTTGTTCGAATTACAGAAAGATTCCAATTAAAGAATGTATTTTAAAAG
GTTTTCTACTCGAAAAGGGCTGGAAACATGTTCGAAATATAGAAAGATTC
GAATAGTAGAATTTCGAATAAGCGAGGGTTTACCGTATATGAACTGGAAT
ATTTTCATTTCTTCCTTTAAGATATGTCGCATGGAACATGCACGAAATGT
TCGAAGATGTCTACCATTTTGAAAATGATCTTGACATCGTTTCGTATATT
AAATTGGCTCAACAGTACGATCTCATGATTTTGTTGAGGCCTGGACCCTA
CATTGATTCTGAATGGGAATATGGCGGTTTTCCTTATTGGATGAACAACA
AAGTTGGGAAATTGATCCGAACTTCAGACCAAGGATATCTCAATCTTGTT
GACAAATGGTTTTCTGTTTTGCTACCGAAAGTTAAACCACTTTTATATGA
AAATGGAGGACCTATCATTGGTGTTCAAGTAAGTGATAAAGTTTTTCTCT
TTGTGTTTCAAGTAGGAAAAATAGCCCTCGTTAAGACAGTTTATAAAAAA
GGGAATAATCTAGTTAGACTAGTAAAACCACATCGTTGTATTCCGCTGCA
GCTTACGCTGATACACGCTCGTTAAGTTTGCTGAATACACTGGCTTTCCA
AACCACTCTTCCATGGCAATTTACCTTGTTTATAAACACTTTTTTGTCGC
GTTTCTGTGTCTAAGGAAAGGCAGGTGGTTAGCAGTCTTGCAAAATGTCA
AAATTTGACGTTTAAAGGGCGCGAAAGTTCCTAGGAAAATTCACCTAAAA
TTTGGCTTTCAATTTTCACCGAATTTCATACATGGAAACCCATATAGAAA
GAAAATCATCGATTTTCATGATTTTTTGACTCTCTCTGAAGGGGTTCGTC
TTTGTGACATCGAGAGAAATTTCTCGAGGTAAGCGCAAACCGATCGAAAT
TCGAAATAGTCCCATTTATTTCGTGATTTGTTGTATTTGGAGACATTTTG
CTGCCCAATTCTTGATTTTACTATAATCTTCGTCTTTTTTTCTCAGGTTG
AAAATGAATATGGTAGTTATGGTTGTGATGAAAAATACATGCTAGCAATG
GAACAAATGTTAAGAAAATATCTCGGCCAAAAAGTCTTTCTATACACCAC
AGACCCTATCATTGATCAAGCTTTACAGTGTGGTTCAATTTCATCCTTGT
ATAGAACAGTCGATTTTGGAGCAGGTCATGATGTGAATAAGTCGTTTGCA
CTGCAAAGGAAATATCAGCCGAAAGGACCCTATGTAAGACCACCCTTTCT
TTTACCCTCGAGTATGACAGAGACCACATTGCGCAACGCGTCTGAATTCA
TTTTGGTCTTCCATTCCCGTTGGGTGGCATTTAGCCCTTTATCGTTATTC
CGATCACTGGAACACTTGTATCCAGTCCTTTAAATCGCGTTTTTGATTTT
TCTGACATAACGCTCATGATAGTACCAACATCCATCAGAAAAATCAAAAA
GTGGTGCAAATGGCTCTGGGTTAGGTTGGGTAGCATATTACCTACCAAAA
CCTCTCACTCGGCAATTCTTGCTTATATTTTACAGGTTAATTCGGAATAC
TACACTGGTTGGTTTGATAACTGGGGTGAAGGACATCATGTTGAACGACC
TGAATACATAGCACATTATTTGGGTCAAATACTGAGCTTTGAAAATGCTT
CCGTCAATTTGTATCTGTTTGAAGGTAACTTGTGTATTCAATTCTATTTT
TCAGAAAGATTGAATGCTCATATTCATATCATTTATAGATTGATACCTTA
AGGGAACTAATTTTGTGGGGACTAAATTTTGCGGTTTTTGTGGATTTAGG
CCCAGACCGCAAAATTAAGCTCCTGCAAAAATTTTCAAATGCGAAAAACA
AAGGTAGAATAATTCACAGTACGGCTCTAATTTTCTTTCAAGTGAGAAAT
CCGCAAAATTAAGTTCCCGACAATATTTAATATTAAATCTTGAACTGCGA
ACCGCAAAAATTAGTTCCCGCAAAAAATAGTTCCCTTAAGGTATTTTCCA
ACCTCTTCCCTATATATCCTAGGCTTCATTTACACGACTGTTGGACGCCA
GGGAATATTATCTGGCGCTATCAGTAAGCATCAAAAAGCTGATAATATGC
AGGGAACGAAGTTTGCAAAAATAATTGAGGAGATGTAAGGACAAAAACCA
CTCATATTTCAAACCACTTATATTTCAAACACTCTCAAAAATAGACAACT
TCAACAGGCCTTGCAAGGATCATACCTGGACCTTCTTTAAAGATTTTTTA
TTACTTTCTCTCCGATAGGTGGTTCAAACAGAAATTTTATGAATGGTGGA
AGTTACATTGCCAACGAATATCTTCCCATAACCACAAGTTATGATTTTGA
CGCTCCATTGTCAGAAGCTGGTGATCCTACAGAAAAATATTGGCAAATTC
AAAAAGTCATTTCCAAATATGAGAGACTTCCATCTGGACCGCAACCAGAA
CCAACAAAGAAGTTAGCGTATAGAAAGTTGAGAATTTATTCTGTAAGTTT
TGCTATATTTTTGGAAGAATAATTTTCAAGTCTTAAAGTATCTTCGCAAA
AATTAATGGCAAATACAATGATTCAGCCTTAAAGATTAGAAAGTATATAA
ATCTTTGAAAAATGAAAGTACTCGGCGACTCATGCAAAATTTTCCAGCTC
TTATAAAAATCGCAAATTAGATTTGTATGTTAATACGTACGAAACATCAT
GTCTAAAAACTACTGCAAATTTAAAACAAACCTTCAAATTTCAGTTGCCT
TCTGAGAGCCAGCTTTTTAGAGATGTTTTTTTTAGTGATTTGCTTGATGC
AACTATTTTGTCTTGTGCAGATCTTAAAGGAAAGTTGATCTACTTTTACA
CCTTATAAATCTACTTTTTGATTTTGTGTCAAATTTTACTTTCAGTCATT
GATGTTCTTTGTATTGGAGGCCATTCTTCAACCAATAATCCTACCACAAC
CAGCATCATTTGAGAGATTGGATTTAGCTTATGGTTACATGCTCTATCAG
ATCTTCATCGACCAAGACCAACAAATGATTGAAGGACCAACACAAACACT
GAATCTTGGTGATTTTCGCGACCGTGCTTATGTTTATGTGGATATGGTCA
GTCTTTTTAAACATTAAATTTTCCTACTTATGCTAAAAAAATTATCTTTT
TACGCTGGCCCTGATGGACGTTATTATCGACCGGGGTAAGGGGTGGTGTT
TGATTACTCTAAGGTCCTGTATAAACGTTTCCCTTGTTATGAATTTTCGA
AATTTCGGACTAGCCCATTCTTATTAGGACCCCCGTTTATTTATTTTGAA
ATATTTTCAGCTATTCATTCAAAAAATTCATTTCACTCATCATTCAAAAT
TTTTCATTGGTTTTTATTCTTTAGAAATTGCAAGGCATTTTGGAACGAAA
CGGTGACTTCCAACTGAACATCACAATTGATCCTGGACATGGACTTCAAA
TCATTGTCAGTATCCATAGAATCATCAATATAATTATTGCGAACAAACAA
ATTTAATAAACTACTCGAAAAGTATTCTACTTTTCACACGTCCAAATTTT
GAAGAGACTTTCTGACTTTCCATCGAAATGTGTATGAAGTTAATAAGGCT
TCTGGTTATCTTCAACGAAAAATTTTCTTGTATAAGGTAGAGAATAAAGA
GAGATTGGCGATTGAAACTGAAATTAACAGCCAGATATATCAGCATACGT
ACTTCAATCGTGTTCAAATCTCATATTATTCACTTCTTTCCTATTTAAAG
GTGGAAAATGAAGGAAGGACTTGCTTCTCTGAAGCCATCCAAGACGTTCG
AAAGGTAGAAAATTAACAATCACCTATCTAAGCCTAACTTTTAGCTCAAT
TATATGTAAAATAGAGTTGATTACACATAATATTCGAGTAAGTCTTTCTA
TTGCTCCAACGATGTACAATAACCTCAACATCAAACCTCAACATTTACGA
TTCCAAACCAACGAAGTATAAGCTCGAAGGGCTAGAAGCGAATCTATTAC
CTTTCGTAGCCAAGAAAAAGTGAAACCTTAGATATTCATTGTTCCGAACC
CCTTTTAAATAGCATTAACTTAGCTAAAAATTAAGAAAATTTTGCATTTT
AATAGGGATTGCTAAGTGGAGTCATACTTAGTGGAGCTCCAATTACCGGT
GACTGGGAGCATTTCCGGTATGGTATTTATCGCCAAAACACACCGGAAGC
AAGAGAATCAGAAGAAGAAAATCACTTGCTGGGTGGATTCGCCGCCCACC
GCCCGTTTGATGAACAAGCACCAGTCATTGTGAATTCTTTTACAGAGCAT
ACACCCAAAGTACAGAAATTATTTACAAGCACACAAGCACAAGATGGTTG
GGTTGGACCACCAGCGTTGTATGGAATTAGCTTTGTATTGGAGGAGGTTG
CAGATACTTATCTAAAGCTTGACCAATGGGGGAAGGTAATGTTTGATTAA
GTATGTATCACTTTCATAAAATTTTGGAAACTTGGGGCCGTTCATGGAAG
GTATACAGTGCTTCCACAGCTCTCGGAAGATTTTGTTTTCGCCTGGATTT
ATTAATAGTGGATAAATTTTCTATTAGCAGATTCATATAAAAAAAGTCAC
GAAAAAATGTCGAGTAAAGCTCTGATTGGATGAGGCCCTGGACATTTTGA
AAAAAATATAAATATGTGTGTAATATTTAGCCAATCAGTGCTTAACTCGA
CGTTTTTTCGTGACTTTTTTGTATGAATCTGCTAATAGAAAATACGCAAA
ATACGTGTATTTTCATATTTATGAAATCAGGTGTACGAACAAATTGTTCT
ATTTCAATTCACCAGGGATTTGTAACAATCAACGAAGATCACTACTATAA
ATATTGGACAAGTTCAATTCCACAAAAGACCATCTTTATACCCAAAACAA
ACCTTAAAGTTGGTAACAATACAATCGTACTGACGGAATTTGAACGTGCA
CCTTCAAGTATGGATGAAGCCTATATTGAACTTGTTGAAAAGCCAGTTTT
CGTGTGAAACAATTATTTTTTGTTTTTATTCAGTGTGCTTTTTAGAAGAA
AAACAAGACACCCTTATCTCAATGACCCGCTAAAAGTTTTGACCCGGGCT
GGCTATGAAATAAATAAATTTGAATTGATTTAGAATTGATATTTCAATAA
CTCACTCGATTTTCACCGTTGAAGAAATAGTTTTCCATATCAAAACATTG
AAGAGTTTGGTTTTATTTCGACTTTGACCAGTCTTACCTACGGGTTCTAT
TGACCCAGCGAGGGTCAAAATTTTATACAAAATGTTGTTAATTAGCGTGT
TGGTATATACAGTAGATTTTGTAAACACACACGAATTAGTGTATTGATAT
ATAGATCAGAGAGCAGATTTCAAACTTATAAAGAAGATTAATCCAATTTC
TG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038372XLOC_038372Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061172-exon-scaffold_354-1575043694:506923..507014TCONS_00061172-exon-scaffold_354-1575043694:506923..507014Clytia hemisphaericaexon
TCONS_00061172-exon-scaffold_354-1575043694:493073..493296TCONS_00061172-exon-scaffold_354-1575043694:493073..493296Clytia hemisphaericaexon
TCONS_00061172-exon-scaffold_354-1575043694:491761..491814TCONS_00061172-exon-scaffold_354-1575043694:491761..491814Clytia hemisphaericaexon
TCONS_00061172-exon-scaffold_354-1575043694:491130..491459TCONS_00061172-exon-scaffold_354-1575043694:491130..491459Clytia hemisphaericaexon
TCONS_00061172-exon-scaffold_354-1575043694:490163..490749TCONS_00061172-exon-scaffold_354-1575043694:490163..490749Clytia hemisphaericaexon
TCONS_00061172-exon-scaffold_354-1510915933:506923..507014TCONS_00061172-exon-scaffold_354-1510915933:506923..507014Clytia hemisphaericaexon
TCONS_00061172-exon-scaffold_354-1510915933:493073..493296TCONS_00061172-exon-scaffold_354-1510915933:493073..493296Clytia hemisphaericaexon
TCONS_00061172-exon-scaffold_354-1510915933:491761..491814TCONS_00061172-exon-scaffold_354-1510915933:491761..491814Clytia hemisphaericaexon
TCONS_00061172-exon-scaffold_354-1510915933:491130..491459TCONS_00061172-exon-scaffold_354-1510915933:491130..491459Clytia hemisphaericaexon
TCONS_00061172-exon-scaffold_354-1510915933:490163..490749TCONS_00061172-exon-scaffold_354-1510915933:490163..490749Clytia hemisphaericaexon
TCONS_00061172-exon-scaffold_354-1491911889:506923..507014TCONS_00061172-exon-scaffold_354-1491911889:506923..507014Clytia hemisphaericaexon
TCONS_00061172-exon-scaffold_354-1491911889:493073..493296TCONS_00061172-exon-scaffold_354-1491911889:493073..493296Clytia hemisphaericaexon
TCONS_00061172-exon-scaffold_354-1491911889:491761..491814TCONS_00061172-exon-scaffold_354-1491911889:491761..491814Clytia hemisphaericaexon
TCONS_00061172-exon-scaffold_354-1491911889:491130..491459TCONS_00061172-exon-scaffold_354-1491911889:491130..491459Clytia hemisphaericaexon
TCONS_00061172-exon-scaffold_354-1491911889:490163..490749TCONS_00061172-exon-scaffold_354-1491911889:490163..490749Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:490163..507014 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.300002	0	0.0550588	0.0558974	0.0692641	0	0	0	1.59436	0.426103	0	1.99795	0.283704	0	0	0	0	1.03839	0	0	0.575987	0	0	0	0
Blast
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BLAST of TCONS_00061172 vs. Swiss-Prot (Human)
Match: BGAL (Beta-galactosidase OS=Homo sapiens GN=GLB1 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 7.688e-18
Identity = 55/135 (40.74%), Postives = 78/135 (57.78%), Query Frame = 2 
Query:   65 ASVNLYQFEGGSNRNFMNGGSYIANEYLPITTSYDFDAPLSEAGDPTEKYWQIQKVISKYERLPSGPQPEPTKKLAYRKLRIYSVENEGRTCFSEAIQDVRKGLLSGVILSGAPITGDW--EHFRYGIYRQNTPE 463
            ASVNLY F GG+N  + NG +   + Y    TSYD+DAPLSEAGD TEKY+ ++ +I K+E++P GP P  T K AY K+ +  ++  G      A  D+     SG I S  P+T     +H+ + +YR   P+
Sbjct:  301 ASVNLYMFIGGTNFAYWNGAN---SPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVG------AALDIL--CPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQ 424
The following BLAST results are available for this feature:
BLAST of TCONS_00061172 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BGAL7.688e-1840.74Beta-galactosidase OS=Homo sapiens GN=GLB1 PE=1 SV... [more]
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