TCONS_00061171 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061171
Unique NameTCONS_00061171
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4309

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061171 ID=TCONS_00061171|Name=TCONS_00061171|organism=Clytia hemisphaerica|type=transcript|length=4309bp
ttctaatatttttagtGTTGTCAAACAGACTTtctcatttcaaaatttaa
ggtTTGTTAGAAACAAAAACAGCTTGAAAACTTACCAAAAAAACAACTGC
AGTCTCCCAATCCACCAAAGGAATTGAAAGGTTATAAAACCATATTTTTA
TATAGAAATGAATATGTATCTGAGGAAGAAAAAGTATTATCTGATTGGGA
TCCAATGAAGGATTCTTATGAGCAGAAATCGTTTAACTCATATAAAGAAC
CTACTTATGATGCTGATGTTACTGAAAGACACAATCCTGTCAGGGGgacA
AGAATATCTCCTGCTAAAGGATCAGAAGATGAAGTGACCTTATACGTCTC
AAATATTCCCATCACTCTCAATGAGGATGCTATACGAAACATTTTCAAAC
AATATGGAAAAGTAAGACGAGTTACCAAATGCAGACCTAAAGTTACAAAT
ACTGATACCACTTTTGGATTTGTTTCTTATGCACATGTAAGAGAAGCTTC
AGAAGCTATTGCCAATTTacatgattttgattttggctttGAGAAGAAGT
TACGTGTCAGACTGGCCCATGGGAAAAAAGAGGATGATGGGATGCATTTT
GTTCCCCATAATATTGATATTAAGCTTGGTGGTGACTATAAACCTCAGAC
AGAGACTATCAATGAAGATTCAGGAAATGATTCTCTAGTTGAaagTGGAA
ATACACCACCCAAACTATCAGAACCCATCAAAACAAATGAAGATACTCTG
TTCAAGAGCATGTTTCCAGAGACCACTACCGACAAAGCATCATTACATTC
AACAAATCAGGGGTTTGTACCTGATGGTCCCAGGTTGTATATTCAAGGAA
TAAGCACAAGATTGGATAAGGATGCGTTGCAGAGGATTATTGGAGAGATT
GCACCTTGCAAAGATGCTATACTCACACCACCAAAGACACATAACCAATA
CACAACTTTTGGGTTTATAACAGTTGGTAGTGTGAAAGATGCAGAAACTG
TCATCGACCATTTCAATGattttggaaacaaaataaaagtcagtTATAGC
AACAAGTCTGCTAAGGAATATAACAAGCCAATAAGCACCTCTACAGACGA
TGATTTCTACCTTAACCTACTCAAAGAACCAAGTTTGGAATCAGCCTTTG
GTGAGGATGTGGTTAAAGATCCTATTATTGAATCACCGCCAGCTCAAACG
GCCTATGAACCTGTTACTATAACCAAGAACAAAGAATCACCCCTTGGAAA
CATCAAAGGACTATCTGCACTAGCTAATGTTTTGGATGCAAGTAGATCAA
AACcaataaaagaaaactttaATACAATACTAGCTAGAACCCCAAGTCCA
GTTTCCGAGCCACAGTATACCCCTCTGAAAACTGCAATCCAAGTTGCTGA
TCAACCTGTCTGTGAACCTGTTTCTGTGGCTAAAAACAACGAATCACCCC
TTGGAAACATCAAAGGACTGTCTACACTAGCTAATGTTTTGGATGCAAGT
AGCtcaaattcaacaaaagaaaacttGGGCAAAGatACAATACTGACAAG
TCCAGTTTCCAAACCGCAGCATAATGCCCAGGAAGAGTCACCAATAACAG
AAATTTCTTCACATCAGCAAACTACTACTCAATATGCTCCTTTAGACACT
AAAACTCTAGAAAAATCGCTAGTCACCAAAATTATCTCACCTCAGCAAGA
AATTAAAGCATCAAGCTCACCAGTAAAAGCTGCAACTGCTCATTATTCAG
GAGAGGAAGCGGAAGTTTCTGTTGAGtcattaatgaaaattttggcTCCT
GATATTTTACCTGCCAAAACAACCGATGAAGAGAAAATTACACTGGAAAC
AATCAATTCAGACACACCAAATGAAGAACGCCCTCCTACACCAGCACTCC
CAAGTGAAACAACGTTTATCACATCTGAAATTCCTTCACATATACATCCC
CTTGAAACTGTTTCTTCAAGAATCGAAGTGCAAAAACTACACAGTGATTC
TTATGATGCTCTAATCACAAATGTGGAAAGCCCTTCTTTATTTTATGGTG
TACTTGTCAGCAAGGATGGCACAATAAAGACTGAGATGATGACTCATGAT
ATTGGTGCAACTTTTGACCGAAGAAAAGATTTAGTTTTCACCTTTCAAGC
AGGTTGTTTGTGTACTGTAAAAATAGATAACACTTGGAGGAGAGCTTTGA
TATTGAAGATTGACGAACGTGatattgatgtttttctcaTTGATTCTGGT
AAAAAAATGacattcaaaaaagaagaaatcaaaCCTTTATTAAAAGAACA
TAAAGTTGTACCAGCACAGGCTCTACCAATGAAACTGATCACTGCAGTCC
CCAAAGATGGCAACTATTGGTCAGAAGATGCTACTAAGTTTTTACAAAGG
ATTCTAACAAACTGTAAAGTTAGAATTAGACCAGAGTACAAAGACAAAAT
GGTATTTGGTATCAGATTAAAGATCGGTACCCAGAGCATTGATAAATTAC
TTGAGGATAAAGGTTTCGCCAAGCAAATCATGTGTGAATTGCCACAAGTT
GCTCACGACTGGAAACCCATTCAATGGAAAGAAATAACAGGCAAGATGGA
TATTCCTTTTGAGATGCCTGATAGAAGCGAATTTGAAATCTATGTCAGCC
ACATTAAAAGCCCTAGTCAATTCTTTTGTCGTCTTTTTGAACAATCTAAA
GATTTGAAAGTTGACGAGGTTGAACAAGAATTAAAAGACTTCTATGAGAA
TGAGACCCAGCCTGAAGACCTATCGATCCATCCAAAAATGACTTGCGCTT
TTAAACTAGAAAATGGTAAATGGCATAGGGGGTGGATCAAAACCATTCGA
GATAAAGTAAAAGTGTTGGCTATTGATTATGGTTCAAACTATATACTTCC
TACAACCTCTATTTATCCTCTTCCCGAGAAGTTCAAAGAATTACCAGCAC
AATCTATATCTATGCAACTCCAATACGTCATCCCAATAGAGGGTGCTCAA
CATTTCTCACAAGCTACCATAGAACGATTCAAATTGCTGACTTTTGGCAG
AGTTATGATCGTTAGAGTGCGCAAAGTCCATAATACTATACATAGAGTGT
TACTATTCGATAAGAAGACTGGGTGTAATGTTGGTGATAAGCTTGTAGAA
GAAGGCTATGCATCAAAGATACACATTCCGAAACCAGGCAAACCAACGGG
CTTGCCTGCTGGCTCTCCTGATAAATCACAAACACCTGGTGGCGTAGCTC
AAAATGATGGTCCAAGCTTTGGAAGAGGAAGAGTGCTTGGTCGTGGTATG
GCTTTGATGAAAGATAGGGGTCTCCTAAAGCCCTGAGCTCTATAAAAACA
TCTTACTTTAgtattttacaagtttgttgacGTGAAAGatgatatatttt
tctaattttcaaagtGGGAGCATACACAACacttaatatttttgaaataa
aggtaaaaaattcaaagtgattttgaaaaacaatggcTCTTTATGATATC
ATTTTAATATTAGttatagtcgcgcggctgaggtcgaaaaaagtggctag
aaaatgattttcgtgatacacctcttagattccacttttttcgatggaaa
ctctcgaattagtatgTGTAGATTCCAAAATaaaaaagtttccacgatat
tatcgtgcaagtaacgagtaaatggcgattttttgcgttcccaggcaaaa
ttgcaaggccaggaaattcatgatttttggagggtcttcaaattaaaaaa
atacctatatcacatgatagagctcttcaaactgagcaaaaaagtgtata
aaaccaaagtcccaacttttctagatcaaaagttacaggcctatttgtgg
tcaaaaaggtgtttaattttgcataaattaatgcagattgtggggaaatt
ccctgttttccatcagttttttaccacaaataggccaNNATACTCGTTtt
ttgcacgataatatcgtggaaactttttgattttgtaatctacacatact
aattcgcgagtttccgttgttttttttggaatctaaaagatgtatcacga
aatgaaacgtttttcgacctcagccgcgcgactattaTTTCTTGTTGTAA
ATAGtttgttaaaaacaaaaaaatctttagaaaGCATTCATCTCCGATGC
AGCAGGATGCAGTGCAGTTTAGTTTATAATGTACCTAGCTTATGTTacca
ttttgtattttttatttcaggatGATAGACTGaataaaattatgttttta
ttaTGTTTCTTCTTGGGCTGACCATTAACATACACACCTTAGTCATTGTT
AAATGCTCA
Run BLAST on NCBI

transcript from alignment at scaffold_354:463643..473841-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061171 ID=TCONS_00061171|Name=TCONS_00061171|organism=Clytia hemisphaerica|type=transcript|length=10199bp|location=Sequence derived from alignment at scaffold_354:463643..473841- (Clytia hemisphaerica)
TTCTAATATTTTTAGTGTTGTCAAACAGACTTTCTCATTTCAAAATTTAA
GGTTTGTTAGAAACAAAAACAGCTTGAAAACTTACCAAAAAAACAACTGC
AGTCTCCCAATCCACCAAAGGAATTGAAAGGTTATAAAACCATATTTTTA
TATAGAAATGAATATGTATCTGAGGAAGAAAAAGTATTATCTGATTGGGA
TCCAATGAAGGATTCTTATGAGCAGAAATCGTTTAACTCATATAAAGAAC
CTACTTATGATGCTGATGTTACTGAAAGACACAATCCTGTCAGGGGGTAA
GACAATCTTCATGTTTTTTCCTACCTTTTTTAACGCAAGTCAAATATTAA
CTCCTTAAAATATTTACTGGGGAATTTTATTAAATGAAATTCCTTTCATT
ATCATTTCAATGATTGCAATTTGCTGCTTTTTCTTTTTTAGGACAAGAAT
ATCTCCTGCTAAAGGATCAGAAGATGAAGTGACCTTATACGTCTCAAATA
TTCCCATCACTCTCAATGAGGTATGCTTTTTTTACCTAAGGGTTTTACAC
ATTAAAGCTCAAAATTTCAAATGCTGTGTCCCACCAAAGATTTAATTTAA
TATTGATAACAAAGAATTCACTTTTAGAAGCACTTTTTTCGTTTTAAACA
TAGAGTAAAATTTAAAAATCTTGGGTGAACTTTGAAANTTCACTTTTAGA
AGCACTTTTTTCGTTTTAAACATAGAGTAAAATTAAAAAATCTTGGGTGA
ACTTTGAAAAAAACTTAAGAAATGGATAGAAATCTTTCAGTACTACTTTA
CTTTACATTAATTAGGATGCTATACGAAACATTTTCAAACAATATGGAAA
AGTAAGACGAGTTACCAAATGCAGACCTAAAGTTACAAATACTGATACCA
CTTTTGGGTAAGAACAGAGAGCTTCTGTTACACATCAATATACAAACAAC
CTGTTTTGCATGTACTACATCATTGTGTATATTTAGTTTACTCTAGGAGC
CTAGTAAACAGTCACATCCTCTGCTTGTTAATTTTTCAATTTTTTTCAAC
TACCCTGGACCCTATTAGGACCCCCTGTTCATTAATTTTTGAGAATTCTT
TTGGCTGTCAAAAGAAAAGTCCCTTATTTGCTCAAGTAGTATAAAAGTAT
GTAAAATTTAATTTATCCATTTCAGATTTGTTTCTTATGCACATGTAAGA
GAAGCTTCAGAAGCTATTGCCAATTTACATGATTTTGATTTTGGCTTTGA
GAAGAAGTTACGTGTCAGACTGGCCCATGGGAAAAAAGAGGATGATGGGA
TGCATTTTGTTCCCCATAATATTGATATTAAGCTTGGTGGTGACTATAAA
CCTCAGACAGAGACTATCAATGAAGATTCAGGAAATGATTCTCTAGTTGA
AAGGTATTTTAAAAATGTTTATTATATAGACTGTAATTCTTTGTAGATTA
TGTTATTACTAGATCCAGTACATCCAGTATGTCATTCGAGATAACTCAAT
AATTAACTTCTTTTTCGTGCTTCGTCCCTTATGCCATCCAGCTCTGGATG
ATATTTTGATGTCAAGGTACCACACTAAAATTATAGCCACAACATGAGAT
TCTTTAAGAAAATTCAGCAAAGACACACAGAATGAAAAATAGTATATCTC
TTCATTTTCAAATTCAAAATAAAAATAGTACTAAAACAATTCTAAGTTGC
GCTTTCATCTTCTGAATGTCGATTTTAATTTTACGTTTTACTTTAGATTT
GTTCCTTTCTTGTTGACTCTATTTTTTATTGTTTACCTTTGCAATTTATT
TCCCAGTGGAAATACACCACCCAAACTATCAGAACCCATCAAAACAAATG
AAGATACTCTGTTCAAGAGCATGTTTCCAGAGACCACTACCGACAAAGCA
TCATTACATTCAACAAATCAGGGGTTTGTACCTGATGGTCCCAGGTTGTA
TATTCAAGGAATAAGCACAAGATTGGATAAGGTTCGTTAACAATTAACAA
TTTCAGCCATTCTGCATAGTTTGTCTCTCCCCCCTTCTTAAAAAGGGGGG
GGGTTACACCTTCCGAAAAAATGAAAAAGGGGGGGGGGTCAGAAATTTTC
ATGAATTTTCATGAATTTTCACTATTATGAAATTCGGTCTTAATGAAAGG
TTAGAGTAGTCTGAGTGAATCAAAGTGAATAGAAGAAAGTAGTTTATTAT
TTCGCTTTATCTCTCTAAAGCTATCTCACATATATTGTTAGCTATTTTTG
TCAAAAATCCCTCGGGATAGGCATTTTTAAAAGCTGTTGGAAACACCAAG
AAGGGGGTCTGCACTATGTTATGTAATAGCAGACAAAGAAGGACACTTTC
TCTAGGCATATTTCACTAAAAATGTTCTTTTTATGGAACCTTTTGAGTAT
TTACATAGGGCAGCATCTGATCGTCCGATATCTGAACACTTTTAAAGAGT
GTACAAAATGACCTGGATTTCATGTCTTTTTATAGGAACACCTAGTTCCC
CTTCCTCTTAGAAACCATTTTGGAACTTGAAAATAAATTCTCATGATCTC
ATTAAACTTTTTGAACCTGTGTGCTTTTAATTTTCTTAGGATGCGTTGCA
GAGGATTATTGGAGAGATTGCACCTTGCAAAGATGCTATACTCACACCAC
CAAAGACACATAACCAATACACAACTTTTGGGTAAATACACATAATTGGT
AGATCTTGCTTGATAATTCTTTTATGAGATAGATGATTTTTTTTGCTCAT
GAGGGCTTTCTTTTAAAGAATATGTGTGTTTAGACATGAAATTTTGTTTG
CTTGGCGTATTTTTATAGAAAAACTGGCCAAATTCGATATTATTTTTATA
AGCACATTATCAATTACTTAGGTATTAGCTTTTCTCGAGATTGGCTCTTT
CATTCTTTATGATTTTTTGCACAAAGATGTATAACTATAAACCCTCGTAT
GTGACGGAGCTCGATTTTCGAAAAACAAAATTTGGAGGCAATTTTGGGCC
AAAAAACGGCTGAAAAACAGGTTTTTTGGACTTTGTGAAAAATTGGATCA
TTAATTTTTTCTGATATTTTGCATGAAAGTAGGGTACCATCATAGGTAAA
AGATGGCTCAAGCTGATTTTTGCAAAAAAAATTTTGTTGGCTCAAAAAAC
GCATCTTTATCTATAAGAATCACTATTAATAAGCATACATCAATGTTCTT
AGCCAAATAATGATGATGAGATGAGATGGATGTTTTTGTTTTGCTCAAAG
TCTTGAATATGAAAGAATATTTCAGGAGCATGAAATTTTGGTTTCTAAAC
GTTTTTTTTATAAGAAACATAGCGTCAGCCTGTGTTTAGGTCCCAGGCAA
AAATTAGGTCCCCCCTGAGTTTTAAGTTCCCCCAAAGACTTATGAAATTT
TTGTTAGCACCCAGGACTTTTGAGGTCCCCCAAAAAAGTGGTGTACTTCT
AGCCCCCTCCTTTTTTGGGAAAAATTTAGGGTGTAACCCCCTCCCCCCAA
CCAGCAGGGGGGGGGCTGACGCTATGAGAAACAAACAACTAATTTTAATA
GATTGTCACTGTTTATGTTCTGACTGATTGTTTAATGGTCAGGCTCACGT
AGATATCAATTATATATGTGTTAAATGCATAACTAGGTAGGTTCATAAAA
GTATCACTTGTTTTCTTTCAGGTTTATAACAGTTGGTAGTGTGAAAGATG
CAGAAACTGTCATCGACCATTTCAATGATTTTGGAAACAAAATAAAAGTC
AGTTATAGCAACAAGTCTGCTAAGGAATATAACAAGCCAATAAGCACCTC
TACAGACGATGATTTCTACCTTAACCTACTCAAAGAACCAAGGTTCCAGT
TTCTGGTTTTCTGTCTTCTTGTCAACTTGTGCGAACACCATTTTTATTTT
TTGTGTTTCATAATTTTGAAGATTCGGACAAATTTCCATTTGGCACCAGT
TGGCACGGATAAATTCTGAAAAAACACAAAATAAAGATTGTAGGTTCTTT
ATCAGGCTAATTGACATAAAAGAGCAATGGTTTTAAGATGGGAGCACCCC
TCTAATGTGAAGTCTCATTTATTAAAGTTTTGCACAGCTTTAATAGTTAC
AAAATAATGAATTCTGAGTACTTTATAATTCATTATAAGCTTTGCTAAAT
ATAAGGGGTTTATTTTAAATTCACACATGCAATTAATTTCAAACCCCTAA
AAGCCCATTTTTAGCAAATCAATTTTTTTGCTTTAACTCTATTTTTATCA
TAGAGGTGGGTGTTTTCCACCACCCTGGCTTTTTGCTAATAGCTCACTGA
AAATTTTTTTTGAACGCTCTGAAACTTTGACTTTTAATATGATCTTATTA
GTAACATGTATACCAAATTTTACCATGATACCTTCACTAAAATAGGTTTT
ATGAGTTTTTTGTGCATGCATGTCATAAAATCCAGCTAAAACCCTGTAAA
ATCTCAAATCTTGAAATAAGCATAACTTTCAGTAATTTTTGATGTTATCA
TCAAATTTTAAGTATGAATAAGATGTTTCAGAAAATTAAAAAAAAAATTT
ACAAAAATGATGTTGTTATCAAAAATGAATTTACTAATTTCTGAAAAAAT
ACTCATCTCCTGCATATATTTTAATATATATTTTATGCTAGACAATATTC
TGCCAACTTTCAAGTCCATAGAACCTCTAGATCAAAATTTATTCCAACCC
CCAACCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAA
AAAGCTTGATAATAATAAGGTTATTTGAACTTCAAAGATTTTCCTCATTA
ATAGTCATGTTTACATTTTATCAACATTGACTTTGCAGTTTGGAATCAGC
CTTTGGTGAGGATGTGGTTAAAGATCCTATTATTGAATCACCGCCAGCTC
AAACGGCCTATGAACCTGTTACTATAACCAAGAACAAAGAATCACCCCTT
GGAAACATCAAAGGACTATCTGCACTAGCTAATGTTTTGGATGCAAGTAG
ATCAAAACCAATAAAAGAAAACTTTAGTAAGTGTTCGGTTAACTGCACAG
AACTGCAGCATATTGTGTAAAGTTTAGTCTTTGGAAAAATAGATATGTTT
AATATATTTCAAAGATAAATACAAATAATATGTTTTTCAGTTTTCATATA
GGTTCATTTTTGTTCATTTTTTGTTCAATCGTCTTATTTTTCAGATACAA
TACTAGCTAGAACCCCAAGTCCAGTTTCCGAGCCACAGTATACCCCTCTG
AAAACTGCAATCCAAGTTGCTGATCAACCTGTCTGTGAACCTGTTTCTGT
GGCTAAAAACAACGAATCACCCCTTGGAAACATCAAAGGACTGTCTGCAC
TAGCGAATGTTTTGGATGCAAGTAGATCACCTCCAATAAAAGAAAACTTT
GGCAAAGGTATGATACAGTAATTAACTACAGAATAATATGTAAAGTTTAG
TCTCTTGGAAAATAATAATGATAATCTTGAGTTCTACTAATTGGAGATAT
CATTTCATAATTTGCAGTTCTTGTTCTGTGTTAGCTGTCAAGATGTATGA
GATAAATCTGTTTAATAATTTTGTTCAATCGTTTTATTTTTCAGATACAA
TATTAGCTAGAACCCCAAGTCCAATTTCCAAGCCACAGTATGCCCCTCTG
AGAACTCTAACCCAAGTTGTTGATCAACCTTTCTGTGAACCTGTTTCTGT
GGCTAAAAACAACGAATCACCCCTTGGAAACATCAAAGGACTGTCTACAC
TAGCTAATGTTTTGGATGCAAGTAGCTCAAATTCAACAAAAGAAAACTTG
GGCAAAGGTATGATTAACTGCAGAATAATGTGTTAAGTGTAGTCTCTTGG
GTTTTAATTTTGTAATTTTCCTGCAATTCTTTACTAAGTTGAGATGTTCT
TTCATAGGTTGCCAGGGTTTGTATTGGGCTCTTCCAGAAAAAAACCATTC
ATGGGGGTGGAGGATATATTNCTGCCAGGGTTTGTATTGCTTGTTCTGTG
TTAACAGCCAAAGTATAAGAGCCTGTTTGTTTATTTCATCCTTTACATCT
GTAGGCCAGATGACTGCCATCCATTTAAAAAATAGCTCAGTCTCGATTGT
CAAAAGGTTTTTATATTGTTTTGCCTCGCTTATCTTCTTACTAACCGACA
TTTGTTGAGACTTTGGGTTGGGATGGCAAGACAGCAACTTATTTTCGTTG
TTTCAGCAGATTTCACTTACCATTTGCCCAACTAAAATGCACGCGCGGGA
TTCGGAATGTGGTTTCGAGAAAGCAGCTAAATTATTGAGAAATAATTAAG
AAGTAGTGATGTAAGATTTAAGATTGATTTCAGGCTGACAAACAGCCTCT
GGGGATTTCTTTTTAAGCTAAATGACTAAATGGATTAAGATGATTTTATT
CAAAAGTTTACTTCGATTCACTTTTTCCTTTTTTCAGATACAATACTGAC
AAGTCCAGTTTCCAAACCGCAGCATAATGCCCAGGAAGAGTCACCAATAA
CAGAAATTTCTTCACATCAGCAAACTACTACTCAATATGCTCCTTTAGAC
ACTAAAACTCTAGAAAAATCGCTAGTCACCAAAATTATCTCACCTCAGCA
AGAAATTAAAGCATCAAGCTCACCAGTAAAAGCTGCAACTGCTCATTATT
CAGGAGAGGAAGCGGAAGTTTCTGTTGAGTCATTAATGAAAATTTTGGCT
CCTGATATTTTACCTGCCAAAACAACCGATGAAGAGAAAATTACACTGGA
AACAATCAATTCAGACACACCAAATGAAGAACGCCCTCCTACACCAGCAC
TCCCAAGTGAAACAACGTTTATCACATCTGAAATTCCTTCACATATACAT
CCCCTTGAAACTGTTTCTTCAAGAATCGAAGTGCAAAAACTACACAGTGA
TTCTTATGATGCTCTAATCACAAATGTGGAAAGCCCTTCTTTATTTTATG
GTGTACTTGTCAGCAAGGATGGCACAATAAAGACTGAGATGATGACTCAT
GATATTGGTGCAACTTTTGACCGAAGAAAAGATTTAGTTTTCACCTTTCA
AGCAGGTTGTTTGTGTACTGTAAAAATAGATAACACTTGGAGGAGAGCTT
TGATATTGAAGATTGACGAACGTGATATTGATGTTTTTCTCATTGATTCT
GGTAAAAAAATGACATTCAAAAAAGAAGAAATCAAACCTTTATTAAAAGA
ACATAAAGTTGTACCAGCACAGGCTCTACCAATGAAACTGATCACTGCAG
TCCCCAAAGATGGCAACTATTGGTCAGAAGATGCTACTAAGTTTTTACAA
AGGATTCTAACAAACTGTAAAGTTAGAATTAGACCAGAGTACAAAGACAA
AATGGTATTTGGTATCAGATTAAAGATCGGTACCCAGAGCATTGATAAAT
TACTTGAGGATAAAGGTTTCGCCAAGCAAATCATGTGTGAATTGCCACAA
GTTGCTCACGACTGGAAACCCATTCAATGGAAAGAAATAACAGGCAAGAT
GGATATTCCTTTTGAGATGCCTGATAGAAGCGAATTTGAAATCTATGTCA
GCCACATTAAAAGCCCTAGTCAATTCTTTTGTCGTCTTTTTGAACAATCT
AAAGATTTGAAAGTTGACGAGGTTGAACAAGAATTAAAAGACTTCTATGA
GAATGAGACCCAGCCTGAAGACCTATCGATCCATCCAAAAATGACTTGCG
CTTTTAAACTAGAAAATGGTAAATGGCATAGGGGGTGGATCAAAACCATT
CGAGATAAAGTAAAAGTGTTGGCTATTGATTATGGTTCAAACTATATACT
TCCTACAACCTCTATTTATCCTCTTCCCGAGAAGTTCAAAGAATTACCAG
CACAATCTATATCTATGCAACTCCAATACGTCATCCCAATAGAGGGTGCT
CAACATTTCTCACAAGCTACCATAGAACGATTCAAATTGCTGACTTTTGG
CAGAGTTATGATCGTTAGAGTGCGCAAAGTCCATAATACTATACATAGAG
TGTTACTATTCGATAAGAAGACTGGGTGTAATGTTGGTGATAAGCTTGTA
GAAGAAGGCTATGCATCAAAGATACACATTCCGAAACCAGGCAAACCAAC
GGGTTAGTGTTTTTTTATTCGGATTTTAGACAAGTTATGTCTGTATCTTT
TTTTATAAACGGGAACTTGATAATATGATAAGTTAACAAAATCCTAATTA
TAATTAAATATCTCAAAGTTTAAAGGCTTGGGGACACGCAGGCCTGGCCC
TGTATGGCGTGCTATTGCACTCGCACATGCTGACACACACCTAAAATGGT
TTGCAAGTGCTAAAATAGCACTCCTAAAATATACAAGAATGTACAAAATC
CCTTTTGCAAGGGCTTAATAGCACACCATAATCTATGACATATTTTTTAT
GGAGTGCTATTTTGGCACGTGCAAGGTATTGTTCATGGTCAGGCCTGGAC
ACAAGAAGTTTTTTTCCCGTTGATGCAATGCAACATGCTCCATTCCACCA
ACACTAGAAAAAAATTAAGTGTCCCATGGTTTCTTTTTTTGTTTCATGGA
ACAAAAAGTGAGGAAAATACCCAAAAGACACGCTGATTTTGTCCCTGGGA
CAAAAGTGAGAGACACAAATGTTATTAAAAGTGGTAGAAAGAAAAATGGG
GTGGAGACACATGAAAGTGTTTCAGGTTGGTGGGATGGAGCATGTTGCAT
TGCACCAACGCGGAAAATAGTGTTCTCGTGTCCCCAAGCCTTAAAGTTTC
AGTTTCTGGATTTTTTTAAAATGTACATGCTAAAGTTTAGTGTTAAAGTA
TACGGCCAGGTTTCGGAATGTGTATCTTTGATGCATAGCCTTCTTCTACA
AGCTTATCACCAACATTACACCCAGTGTACGTGTTAAAGTGTACATTTAG
TAAATCTGTACAACACTGCTCTTCTTTGAGCTCAGAGAAGGTTTTATGAC
TTACAACAGTATAACTCGTCTTTTAATCCATTTGTTTAGGCTTGCCTGCT
GGCTCTCCTGATAAATCACAAACACCTGGTGGCGTAGCTCAAAATGATGG
TCCAAGCTTTGGAAGAGGAAGAGTGCTTGGTCGTGGTATGGCTTTGATGA
AAGATAGGGGTCTCCTAAAGCCCTGAGCTCTATAAAAACATCTTACTTTA
GTATTTTACAAGTTTGTTGACGTGAAAGATGATATATTTTTCTAATTTTC
AAAGTGGGAGCATACACAACACTTAATATTTTTGAAATAAAGGTAAAAAA
TTCAAAGTGATTTTGAAAAACAATGGCTCTTTATGATATCATTTTAATAT
TAGTTATAGTCGCGCGGCTGAGGTCGAAAAAAGTGGCTAGAAAATGATTT
TCGTGATACACCTCTTAGATTCCACTTTTTTCGATGGAAACTCTCGAATT
AGTATGTGTAGATTCCAAAATAAAAAAGTTTCCACGATATTATCGTGCAA
GTAACGAGTAAATGGCGATTTTTTGCGTTCCCAGGCAAAATTGCAAGGCC
AGGAAATTCATGATTTTTGGAGGGTCTTCAAATTAAAAAAATACCTATAT
CACATGATAGAGCTCTTCAAACTGAGCAAAAAAGTGTATAAAACCAAAGT
CCCAACTTTTCTAGATCAAAAGTTACAGGCCTATTTGTGGTCAAAAAGGT
GTTTAATTTTGCATAAATTAATGCAGATTGTGGGGAAATTCCCTGTTTTC
CATCAGTTTTTTACCACAAATAGGCCANNATACTCGTTTTTTGCACGATA
ATATCGTGGAAACTTTTTGATTTTGTAATCTACACATACTAATTCGCGAG
TTTCCGTTGTTTTTTTTGGAATCTAAAAGATGTATCACGAAATGAAACGT
TTTTCGACCTCAGCCGCGCGACTATTATTTCTTGTTGTAAATAGTTTGTT
AAAAACAAAAAAATCTTTAGAAAGCATTCATCTCCGATGCAGCAGGATGC
AGTGCAGTTTAGTTTATAATGTACCTAGCTTATGTTACCATTTTGTATTT
TTTATTTCAGGATGATAGACTGAATAAAATTATGTTTTTATTATGTTTCT
TCTTGGGCTGACCATTAACATACACACCTTAGTCATTGTTAAATGCTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038371XLOC_038371Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061171-exon-scaffold_354-1575043694:473546..473841TCONS_00061171-exon-scaffold_354-1575043694:473546..473841Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1575043694:473322..473400TCONS_00061171-exon-scaffold_354-1575043694:473322..473400Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1575043694:472935..473026TCONS_00061171-exon-scaffold_354-1575043694:472935..473026Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1575043694:472439..472666TCONS_00061171-exon-scaffold_354-1575043694:472439..472666Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1575043694:471861..472035TCONS_00061171-exon-scaffold_354-1575043694:471861..472035Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1575043694:471161..471252TCONS_00061171-exon-scaffold_354-1575043694:471161..471252Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1575043694:470000..470170TCONS_00061171-exon-scaffold_354-1575043694:470000..470170Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1575043694:468716..468903TCONS_00061171-exon-scaffold_354-1575043694:468716..468903Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1575043694:468411..468547TCONS_00061171-exon-scaffold_354-1575043694:468411..468547Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1575043694:467935..468010TCONS_00061171-exon-scaffold_354-1575043694:467935..468010Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1575043694:465640..467304TCONS_00061171-exon-scaffold_354-1575043694:465640..467304Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1575043694:463643..464752TCONS_00061171-exon-scaffold_354-1575043694:463643..464752Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1510915933:473546..473841TCONS_00061171-exon-scaffold_354-1510915933:473546..473841Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1510915933:473322..473400TCONS_00061171-exon-scaffold_354-1510915933:473322..473400Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1510915933:472935..473026TCONS_00061171-exon-scaffold_354-1510915933:472935..473026Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1510915933:472439..472666TCONS_00061171-exon-scaffold_354-1510915933:472439..472666Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1510915933:471861..472035TCONS_00061171-exon-scaffold_354-1510915933:471861..472035Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1510915933:471161..471252TCONS_00061171-exon-scaffold_354-1510915933:471161..471252Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1510915933:470000..470170TCONS_00061171-exon-scaffold_354-1510915933:470000..470170Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1510915933:468716..468903TCONS_00061171-exon-scaffold_354-1510915933:468716..468903Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1510915933:468411..468547TCONS_00061171-exon-scaffold_354-1510915933:468411..468547Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1510915933:467935..468010TCONS_00061171-exon-scaffold_354-1510915933:467935..468010Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1510915933:465640..467304TCONS_00061171-exon-scaffold_354-1510915933:465640..467304Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1510915933:463643..464752TCONS_00061171-exon-scaffold_354-1510915933:463643..464752Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1491911889:473546..473841TCONS_00061171-exon-scaffold_354-1491911889:473546..473841Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1491911889:473322..473400TCONS_00061171-exon-scaffold_354-1491911889:473322..473400Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1491911889:472935..473026TCONS_00061171-exon-scaffold_354-1491911889:472935..473026Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1491911889:472439..472666TCONS_00061171-exon-scaffold_354-1491911889:472439..472666Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1491911889:471861..472035TCONS_00061171-exon-scaffold_354-1491911889:471861..472035Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1491911889:471161..471252TCONS_00061171-exon-scaffold_354-1491911889:471161..471252Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1491911889:470000..470170TCONS_00061171-exon-scaffold_354-1491911889:470000..470170Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1491911889:468716..468903TCONS_00061171-exon-scaffold_354-1491911889:468716..468903Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1491911889:468411..468547TCONS_00061171-exon-scaffold_354-1491911889:468411..468547Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1491911889:467935..468010TCONS_00061171-exon-scaffold_354-1491911889:467935..468010Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1491911889:465640..467304TCONS_00061171-exon-scaffold_354-1491911889:465640..467304Clytia hemisphaericaexon
TCONS_00061171-exon-scaffold_354-1491911889:463643..464752TCONS_00061171-exon-scaffold_354-1491911889:463643..464752Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:463643..473841 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.7386e-05	4.3536e-06	1.34573e-10	0.00065922	3.46219e-08	5.34844e-06	0.00828899	2.21816e-05	0	0	0	0	1.01185e-09	0	0	0.22767	0	0.00297763	0	0	0.0293893	1.23327e-06	0.00100656	0.00074554	2.5149e-10	0	3.20173e-06	7.48191e-05	9.99877e-11	3.8209e-05
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061171 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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