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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061133 ID=TCONS_00061133|Name=TCONS_00061133|organism=Clytia hemisphaerica|type=transcript|length=548bp
ATTGTATTGTATGTTAAAAGACAAATGAagactttaaaagtttttaacaa
aagatgTAAAGATTAACAATGACTCAATTGAAGactTCAGACGAGGAGGA
AAAACATACGACAATTACCACACGCTTGAATGTTGGCCGTTGGGTTGCAT
GCATCTTTGTTTGAGTCATGACTAATTTTACTTAGTGCTTATAATATATA
ACTAACTCGTTCATTATAAGGAAAAAAGGATGGCTAAAGCCTATCTCAAT
ATAATCTACAGCGGGGATATAAAAGGTTATAATATAATATTTGATAAGAT
TTGAATCAGAAAGTGATTTTGTAGTatagtatctaaaaatatttttcgga
gtgtaatattatcaaaaaaataaaaaatgaagaagaagaagaagaatatc
AATTTTGTTGTAGGATAGTGCTTTGCTCTTCATTTTTATATCTGAAACTG
ATCGATCTTAGACCGTCATgaacgcgaaaaaaaattcaagaaatatttaT
CCAGCCTGTCTCaatacagcttaaaacttttccctggtttacttgaaa Run BLAST on NCBI transcript from alignment at scaffold_354:24836..25821- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061133 ID=TCONS_00061133|Name=TCONS_00061133|organism=Clytia hemisphaerica|type=transcript|length=986bp|location=Sequence derived from alignment at scaffold_354:24836..25821- (Clytia hemisphaerica)
ATTGTATTGTATGTTAAAAGACAAATGAAGACTTTAAAAGTTTTTAACAA
AAGATGTAAAGATTAACAATGACTCAATTGAAGGTGATTATAGATTTAAG
AAACATGAAACATTACATCTATATTTCTTAGAAAGATTTGCTGATTCATC
AATTTACCGAACATCTCAGGGTCGCAGGGTACTTCTACCTCAGATTTTCG
TACAGTCGTTAAATAGAGACGTACAATTCTGATTTTCATGCCTCGATGTC
ACATTTTGATATTTGTTTTAAAGCTTGTATGGGTTTGAGTAAATGATATG
ACGTCAAGCATTTTCCTTTTTCTCAAAGAAAACTATTACTTAATGACTAT
TTTGAGTGCTAAATTTTGCCCCCCCCCCATTTGGTGGGAATGTTTATAAA
TGCCTCATCATTCAATTCGGTTTTATTTCTTTAGTCTAGTTTGAAAATGA
AGCAAAATGTAATGTTGCTTTTTGTCAATAGTCATAAACAAAAATGAAAC
TTGCATTTTTCTCAATTTTAGACTTCAGACGAGGAGGAAAAACATACGAC
AATTACCACACGCTTGAATGTTGGCCGTTGGGTTGCATGCATCTTTGTTT
GAGTCATGACTAATTTTACTTAGTGCTTATAATATATAACTAACTCGTTC
ATTATAAGGAAAAAAGGATGGCTAAAGCCTATCTCAATATAATCTACAGC
GGGGATATAAAAGGTTATAATATAATATTTGATAAGATTTGAATCAGAAA
GTGATTTTGTAGTATAGTATCTAAAAATATTTTTCGGAGTGTAATATTAT
CAAAAAAATAAAAAATGAAGAAGAAGAAGAAGAATATCAATTTTGTTGTA
GGATAGTGCTTTGCTCTTCATTTTTATATCTGAAACTGATCGATCTTAGA
CCGTCATGAACGCGAAAAAAAATTCAAGAAATATTTATCCAGCCTGTCTC
AATACAGCTTAAAACTTTTCCCTGGTTTACTTGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061133-exon-scaffold_354-1575043694:25739..25821 | TCONS_00061133-exon-scaffold_354-1575043694:25739..25821 | Clytia hemisphaerica | exon |
| TCONS_00061133-exon-scaffold_354-1575043694:24836..25300 | TCONS_00061133-exon-scaffold_354-1575043694:24836..25300 | Clytia hemisphaerica | exon |
| TCONS_00061133-exon-scaffold_354-1510915933:25739..25821 | TCONS_00061133-exon-scaffold_354-1510915933:25739..25821 | Clytia hemisphaerica | exon |
| TCONS_00061133-exon-scaffold_354-1510915933:24836..25300 | TCONS_00061133-exon-scaffold_354-1510915933:24836..25300 | Clytia hemisphaerica | exon |
| TCONS_00061133-exon-scaffold_354-1491911889:25739..25821 | TCONS_00061133-exon-scaffold_354-1491911889:25739..25821 | Clytia hemisphaerica | exon |
| TCONS_00061133-exon-scaffold_354-1491911889:24836..25300 | TCONS_00061133-exon-scaffold_354-1491911889:24836..25300 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_354 | supercontig | scaffold_354:24836..25821 - |
Blast
The following BLAST results are available for this feature:
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