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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061124 ID=TCONS_00061124|Name=TCONS_00061124|organism=Clytia hemisphaerica|type=transcript|length=331bp
AGCTTCATTCTTCTCATTCATAACATCGAACCAAGTTTCCAAGTCATTAC
TGTATTTCACAGAATAATCCAACACCCTTTGGCTGGACAATAAAGCATGA
GATGCTCCTTGGATTACAATCGCATTCACCTTATATAGTGTGCCAAGATC
AATCTGCAAAAAATTCCGTTCTTTCATCACATGCCAGCCAAAATTTGGTG
CATTTGGCACGTCAAAGTTTAATCTACCTTGCCATGGTGTGGTGTTGTTT
CCTTTACCAAACATATCCGTAAAAGATTCATCTGGTACTACTGTTGGGTT
AGCGAGACCAATCGCTTTGAAACACGTGTCT Run BLAST on NCBI transcript from alignment at scaffold_354:1123648..1124920+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061124 ID=TCONS_00061124|Name=TCONS_00061124|organism=Clytia hemisphaerica|type=transcript|length=1273bp|location=Sequence derived from alignment at scaffold_354:1123648..1124920+ (Clytia hemisphaerica)
AGCTTCATTCTTCTCATTCATAACATCGAACCAAGTTTCCAAGTCATTAC
TGTATTTCACAGAATAATCCAACACCCTTTGGCTGGACAATAAAGCATGA
GATGCTCCTTGGATTACAATCGCATTGACCTTTGAATggaaaaaaagggg
aaaagaaTCTTTTAAAACGTCATTAGAATTATTGTCTGTTTGGCTTTTCA
ATCTAGACTAGATCAACACTGAGTTTGACAAAAGGTATAtaaaattataa
taataatttttttatccGCAAAAACTAGTTATTCTTCATCAAGTAAACTA
GCCTGAACCACACGTAATCCGTAATTTTTACAGTTTGCTAAGACTAAGAC
CTGAAAAATACTATAAAGCGAAAAAATGTATAAAACCAAGTGGCGTCTTT
TTTTCTACGGAAACACCCCGGTTATTGCCGGTAgtggcaatttaaaacaa
tttttctaACTTGTTTCTGTAAAGAATATTacgcccggggggggtactac
ccttgtcgaccgacgggggtacTCCGCTGagtttcgaaaaatggacccta
cgtgggactcgaaatttgcgaaaaagtgaccctgaatgggactgaaattc
caaaattttctcaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCCCCCCCCCGGGATattacgtaatgaatat
caTAAATTTGATCACATTCACCTTATATAGTGTGCCAAGATCAATCTGCA
AAAAATTCCGTTCTTTCATCACATGCCAGCCAAAATTTGGTGCATTTGGC
ACGTCAAAGTTTAATCTACCTTGCCATGGTGTGGTGTTGTTTCCTTTACC
AAACATATCCGTAAAAGATTCATCTGGTACTACTGTTGGGTTAGCGAGAC
CAATCGCTTTGAAACACGTGTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061124-exon-scaffold_354-1491911889:1123648..1123770 | TCONS_00061124-exon-scaffold_354-1491911889:1123648..1123770 | Clytia hemisphaerica | exon |
| TCONS_00061124-exon-scaffold_354-1510915933:1123648..1123770 | TCONS_00061124-exon-scaffold_354-1510915933:1123648..1123770 | Clytia hemisphaerica | exon |
| TCONS_00061124-exon-scaffold_354-1575043694:1123648..1123770 | TCONS_00061124-exon-scaffold_354-1575043694:1123648..1123770 | Clytia hemisphaerica | exon |
| TCONS_00061124-exon-scaffold_354-1491911889:1124713..1124920 | TCONS_00061124-exon-scaffold_354-1491911889:1124713..1124920 | Clytia hemisphaerica | exon |
| TCONS_00061124-exon-scaffold_354-1510915933:1124713..1124920 | TCONS_00061124-exon-scaffold_354-1510915933:1124713..1124920 | Clytia hemisphaerica | exon |
| TCONS_00061124-exon-scaffold_354-1575043694:1124713..1124920 | TCONS_00061124-exon-scaffold_354-1575043694:1124713..1124920 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_354 | supercontig | scaffold_354:1123648..1124920 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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