TCONS_00061087 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061087
Unique NameTCONS_00061087
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length94

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061087 ID=TCONS_00061087|Name=TCONS_00061087|organism=Clytia hemisphaerica|type=transcript|length=94bp
ACGATAAAGTTCGTTacttcaaatgcaAACCCGATCGTGGTGTTTTTGTT
CAATTCAAGAAAATCATTATGGCTTGGAAATGACTTtcaggttt
Run BLAST on NCBI

transcript from alignment at scaffold_354:612053..612571+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061087 ID=TCONS_00061087|Name=TCONS_00061087|organism=Clytia hemisphaerica|type=transcript|length=519bp|location=Sequence derived from alignment at scaffold_354:612053..612571+ (Clytia hemisphaerica)
ACGATAAAGTTCGTTacttcaaatggtaaataaTCCATACGTTTCTCTTA
CAAACTGaaacccagtcccttagttcgtttttttatgattctgatagcgc
tttAACTATAACATCCCCGTGTCACATATTAGGCTACGTCGTATGTTCCT
TTGTTTCGAGTGTAAAACTCTTActctaggcctaaaagcctggagttGTT
TATTATGTAGACTAGTCACAGATCAGATCTACAACGAGGTTGACAAAAAG
CTCTATCAACAATTAAGTCAAATTCGGAGTCGacgttgtaaaaactccag
ctcatccgaTTGTTTTTGCGCATTATAGCTTTTAGATTAACTTGTATTAG
CTTATTGGTACTAATTTTGAGCAATCTTTGGGCCTCTGCGCAAAAGTTTA
GTATTCGCAAAAATTAATACAATAAGGTAttcatttttgttcttttttag
caAACCCGATCGTGGTGTTTTTGTTCAATTCAAGAAAATCATTATGGCTT
GGAAATGACTTtcaggttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038332XLOC_038332Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061087-exon-scaffold_354-1491911889:612053..612077TCONS_00061087-exon-scaffold_354-1491911889:612053..612077Clytia hemisphaericaexon
TCONS_00061087-exon-scaffold_354-1510915933:612053..612077TCONS_00061087-exon-scaffold_354-1510915933:612053..612077Clytia hemisphaericaexon
TCONS_00061087-exon-scaffold_354-1575043694:612053..612077TCONS_00061087-exon-scaffold_354-1575043694:612053..612077Clytia hemisphaericaexon
TCONS_00061087-exon-scaffold_354-1491911889:612503..612571TCONS_00061087-exon-scaffold_354-1491911889:612503..612571Clytia hemisphaericaexon
TCONS_00061087-exon-scaffold_354-1510915933:612503..612571TCONS_00061087-exon-scaffold_354-1510915933:612503..612571Clytia hemisphaericaexon
TCONS_00061087-exon-scaffold_354-1575043694:612503..612571TCONS_00061087-exon-scaffold_354-1575043694:612503..612571Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:612053..612571 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061087 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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