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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061073 ID=TCONS_00061073|Name=TCONS_00061073|organism=Clytia hemisphaerica|type=transcript|length=1620bp
ATCACATTGTTTGGGTAAGATAGAGCATTTAACTTCAATCTGTAACACTG
CACTGCATATTAAAAAGTAAAAGGCTAGACCACCATGTAGTTACTGATAT
AGTGTTTCATAAATATGTATACTTTAGAATTGAATTATCAAATGTTGATT
TCAACTCTTATAAAAACTTTGGTAATATTATCAACATGTCagctttgttt
ttctttgaaaaacatTCTCATACTTGGTGGTGATGGTATGATGGGGAGTG
CAACTACAAAACTTCTGATGaagcaaaaaacaaaattcaatttGACGTTG
GTTAACCGTGGTAATTGGTATTGGGATTCAGAGGAGACCATCAAGCCATT
TGTTCACCATTATGAATGTACAAGAGGTGATGGATTTCGTGATTTGTGTA
CACAGCTCAATGATGGTCTTTTCTATGATGCTATTGTGGACTTTAGCTGT
TATCATCCCCTAGATATGGAGGATATTTTGATTGTGTTTCGTGGAAGGTT
TGGGAAATACATTTATATCAGTTCTGATTCTGTTTATGAAGTGTGTCAAG
GGAAAAATCATGTGGGATATTCTAAAGAAACTGATGCACTGAGACCACAT
GATAAAGCTTTGCAagaaCAGTTAAATAAGAGAGACTCTTATGGCCATCG
GAAGTTGCAAGGAGAAGAAACCCTTCAAAAGTTCTACCAAAGATTGAAAT
TTGACTACATTGCTCTACGTCTACCGGACGTTATTGGTCCTAGGGACAAC
ACTAACAGATTTTGGAAGTGTTTTCTGTGGACTAAATTCACTGATATTAT
TGGGCCTGTAACTATACCAAAAGAAGTCCAAGATCTTCCTCTCAGTTTTG
TGTATAGTCATGATGTTGCCCAATTAATCTACTCTTTGGCAGATGAAGTT
TACAGCCCTGATGTTTATAATCAAGCTTACAATCTAGGTTTTAAGAAGTT
ATATACCCTTAGGAATATATTTCAAGATATGTCATCATTTATCGGGAGAG
GTTCGGTGAATATTACTGAGGGAGATTTCAGAATTGGTTTCCCGTCTGTG
ACAAGAGGCCCTGTGGATATATCAAAAGCAGAAAAGATGCTAGCCTGGAA
GCCAACTCCTATAGAGAAAGCATTGGTTGAAACGATGGAGTTTTATGATG
ATGCTCAGTTCAACGGTGATTATAAATACATAATGGATCGTGTTTTGGAA
TTTCATGGTGTGTCACGTGACAAATATCGTGAGTTTGTTATCCAGCACCA
TAAGGAGATGGAAAGTAGACAGAAACAggaattatgaaattttgaatttt
aaaaggaatgatatttattttttgtacgACCAAAAAGTGTTATTTAGAAT
TTCTTCATAACATagatttttatagattttataCTGAATTTTATTTACTC
AAAGTATTTTATAtcatatttttatagaaaaaattaTCTTAAATATTATA
ATCTAATTTTATCATACCCATATATTTTAATACAAATAACATTTATCAGA
TGTTTTAAAACATAATATATTTTTCTATGATAGTCCTTGAATAGTATTTA
GTTCAAATTGCCTGAAGACTTCTTTGATACTATggtttttcagaaaagat
tttaatttaaatcataACAA Run BLAST on NCBI protein sequence of TCONS_00061073-protein >TCONS_00061073-protein ID=TCONS_00061073-protein|Name=TCONS_00061073-protein|organism=Clytia hemisphaerica|type=polypeptide|length=390bp
MYTLELNYQMLISTLIKTLVILSTCQLCFSLKNILILGGDGMMGSATTKL
LMKQKTKFNLTLVNRGNWYWDSEETIKPFVHHYECTRGDGFRDLCTQLND
GLFYDAIVDFSCYHPLDMEDILIVFRGRFGKYIYISSDSVYEVCQGKNHV
GYSKETDALRPHDKALQEQLNKRDSYGHRKLQGEETLQKFYQRLKFDYIA
LRLPDVIGPRDNTNRFWKCFLWTKFTDIIGPVTIPKEVQDLPLSFVYSHD
VAQLIYSLADEVYSPDVYNQAYNLGFKKLYTLRNIFQDMSSFIGRGSVNI
TEGDFRIGFPSVTRGPVDISKAEKMLAWKPTPIEKALVETMEFYDDAQFN
GDYKYIMDRVLEFHGVSRDKYREFVIQHHKEMESRQKQEL Run BLAST on NCBI transcript from alignment at scaffold_354:561860..564721+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061073 ID=TCONS_00061073|Name=TCONS_00061073|organism=Clytia hemisphaerica|type=transcript|length=2862bp|location=Sequence derived from alignment at scaffold_354:561860..564721+ (Clytia hemisphaerica)
ATCACATTGTTTGGGTAAGATAGAGCATTTAACTTCAATCTGTAACACTG
CACTGCATATTAAAAAGTAAAAGGCTAGACCACCATGTAGTTACTGATAT
AGTGTTTCATAAATATGTATACTTTAGAATTGAATTATCAAATGTTGATT
TCAACTCTTATAAAAACTTTGGTAATATTATCAACATGTCagctttgttt
ttctttgaaaaacatTCTCATACTTGGTGGTGATGGTATGATGGGGAGTG
CAACTACAAAACTTCTGATGaagcaaaaaacaaaattcaatttGACGTTG
GTTAACCGTGGTAATTGGTATTGGGATTCAGAGGAGACCATCAAGCCATT
TGTTCACCATTATGAATGTACAAGAGGTGATGGATTTCGTGATTTGTGTA
CACAGCTCAATGATGGTCTTTTCTATGATGCTATTGTGGACTTTAGCTGT
TATCATCCCCTAGATATGGAGGTATTCCctttaaaacattttgtttgatt
CAGAAAGTTATTACCAGAATGTATTTTCTTACTTGGCATATATTGGGTGT
GCTAGAAATAAGGTACCATCTGATGctaatcaaaaatagtgtgacattgt
aaaaaatgctcaaaatcaactttttgggATAActcttcttaaaaaaaaat
tttgttatttgagTCAAAATTGTGGCTGCAGTTCAAAAATTCAAGTGTAA
GCCACACGATATTGAAAAGTGATCTCTGAATGGGACCTTCTAGACTTGAA
AGAAGAAAGgctgaattttccaaaaagtgttaaatgtacatactttTGCA
TTGTTAAATGTACTTTTTTGTGGCTTTTTTGTCAGCCACATATTTTACTC
ACACTTCATGCTTAATATATTTAAGTTGAGTAAGCCACAAaatttcgttc
tttttgcaaCAGGTAGATAAATTATTCAGCTTAACCATGGATGTATTTTG
ACATGTAAGCCTCATGATGGCCTCATTCTATGAGCAAAATAGTGGATGAc
atcaaaaatgtcacaaaacaggagTTAATTTTTGATTAGCATCATCTTTG
AAGTAAAAGtcctatctttttttaaagaatcaaacctttttcattggaaa
aattaaagaaaaacttaaattttgataggCCATTTTTCGAATTTCACTCA
TTAGATCAAAAGATTCAAGTTTCATAGTTTAAAATCATTAAAGTCAAATA
AAATGATTGTAAAAGGATCGTTGAGTTGGTAATGTAAAATATTgtttatc
aacatttttaatAAAACAACATGTTTAAGCATGCTTGTTAAACCTGAAGG
TTGTGATTACCCTCATTGTAATTCAATCTGTCTAGCTGTGATATTGTATC
TCAATAAAAAAAGAGGGAGATGGAATCTTTATTCAAAGCATTTATTAAAT
GACTGTTGAATAAATACATTGATTCATATAACATTCAGGTTCTTAGAAAA
AATAGGGAATGCTAGAGTGAGACAAATATTATAGATGAACTTTGTTTacg
atatttttttcaataatttatgttttttatctttctagGATATTTTGATT
GTGTTTCGTGGAAGGTTTGGGAAATACATTTATATCAGTTCTGATTCTGT
TTATGAAGTGTGTCAAGGGAAAAATCATGTGGGATATTCTAAAGAAACTG
ATGCACTGAGACCACATGATAAAGCTTTGCAGTAAGATGTATTTTACTAT
CCTTTTTCACGTTTCTTATTGAGGACAAAGTTGTTTCATTCAATATCATT
ATTAAGAGGACATTCCGACATTGCTGAGGTGTTATTCCCAAAGtgttatt
tttaattaattatGGAAAAACAGTCACCTCTtttaactgattttttttta
ttttagagaaCAGTTAAATAAGAGAGACTCTTATGGCCATCGGAAGTTGC
AAGGAGAAGAAACCCTTCAAAAGTTCTACCAAAGATTGAAATTTGACTAC
ATTGCTCTACGTCTACCGGACGTTATTGGTCCTAGGGACAACACTAACAG
ATTTTGGAAGTGTTTTCTGTGGACTAAATTCACTGATATTATTGGGCCTG
TAACTATACCAAAAGAAGTCCAAGATCTTCCTCTCAGTTTTGTGTATAGT
CATGATGTTGCCCAATTAATCTACTCTTTGGCAGATGAAGTTTACAGCCC
TGATGTTTATAATCAAGCTTACAATCTAGGTTTTAAGAAGTTATATACCC
TTAGGAATATATTTCAAGATATGTCATCATTTATCGGGAGAGGTTCGGTG
AATATTACTGAGGGAGATTTCAGAATTGGTTTCCCGTCTGTGACAAGAGG
CCCTGTGGATATATCAAAAGCAGAAAAGATGCTAGCCTGGAAGCCAACTC
CTATAGAGAAAGCATTGGTTGAAACGATGGAGTTTTATGATGATGCTCAG
TTCAACGGTGATTATAAATACATAATGGATCGTGTTTTGGAATTTCATGG
TGTGTCACGTGACAAATATCGTGAGTTTGTTATCCAGCACCATAAGGAGA
TGGAAAGTAGACAGAAACAggaattatgaaattttgaattttaaaaggaa
tgatatttattttttgtacgACCAAAAAGTGTTATTTAGAATTTCTTCAT
AACATagatttttatagattttataCTGAATTTTATTTACTCAAAGTATT
TTATAtcatatttttatagaaaaaattaTCTTAAATATTATAATCTAATT
TTATCATACCCATATATTTTAATACAAATAACATTTATCAGATGTTTTAA
AACATAATATATTTTTCTATGATAGTCCTTGAATAGTATTTAGTTCAAAT
TGCCTGAAGACTTCTTTGATACTATggtttttcagaaaagattttaattt
aaatcataACAA Coding sequence (CDS) from alignment at scaffold_354:561860..564721+ >TCONS_00061073 ID=TCONS_00061073|Name=TCONS_00061073|organism=Clytia hemisphaerica|type=CDS|length=3519bp|location=Sequence derived from alignment at scaffold_354:561860..564721+ (Clytia hemisphaerica)
ATGTATACTTTAGAATTGAATTATCAAATGTTGATTTCAACTCTTATAAA
AACTTTGGTAATATTATCAACATGTCagctttgtttttctttgaaaaaca
tTCTCATACTTGGTGGTGATGGTATGATGGGGAGTGCAACTACAAAACTT
CTGATGaagcaaaaaacaaaattcaatttGACGTTGGTTAACCGTGGTAA
TTGGTATTGGGATTCAGAGGAGACCATCAAGCCATTTGTTCACCATTATG
AATGTACAAGAGGTGATGGATTTCGTGATTTGTGTACACAGCTCAATGAT
GGTCTTTTCTATGATGCTATTGTGGACTTTAGCTGTTATCATCCCCTAGA
TATGGAGGATATTTTGATTGTGTTTCGTGGAAGGTTTGGGAAATACATTT
ATATCAGTTCTGATTCTGTTTATGAAGTGTGTCAAGGGAAAAATCATGTG
GGATATTCTAAAGAAACTGATGCACTGAGACCACATGATAAAGCTTTGCA
agaaCAGTTAAATAAGAGAGACTCTTATGGCCATCGGAAGTTGCAAGGAG
AAGAAACCCTTCAAAAGTTCTACCAAAGATTGAAATTTGACTACATTGCT
CTACGTCTACCGGACGTTATTGGTCCTAGGGACAACACTAACAGATTTTG
GAAGTGTTTTCTGTGGACTAAATTCACTGATATTATTGGGCCTGTAACTA
TACCAAAAGAAGTCCAAGATCTTCCTCTCAGTTTTGTGTATAGTCATGAT
GTTGCCCAATTAATCTACTCTTTGGCAGATGAAGTTTACAGCCCTGATGT
TTATAATCAAGCTTACAATCTAGGTTTTAAGAAGTTATATACCCTTAGGA
ATATATTTCAAGATATGTCATCATTTATCGGGAGAGGTTCGGTGAATATT
ACTGAGGGAGATTTCAGAATTGGTTTCCCGTCTGTGACAAGAGGCCCTGT
GGATATATCAAAAGCAGAAAAGATGCTAGCCTGGAAGCCAACTCCTATAG
AGAAAGCATTGGTTGAAACGATGGAGTTTTATGATGATGCTCAGTTCAAC
GGTGATTATAAATACATAATGGATCGTGTTTTGGAATTTCATGGTGTGTC
ACGTGACAAATATCGTGAGTTTGTTATCCAGCACCATAAGGAGATGGAAA
GTAGACAGAAACAggaattatgaATGTATACTTTAGAATTGAATTATCAA
ATGTTGATTTCAACTCTTATAAAAACTTTGGTAATATTATCAACATGTCa
gctttgtttttctttgaaaaacatTCTCATACTTGGTGGTGATGGTATGA
TGGGGAGTGCAACTACAAAACTTCTGATGaagcaaaaaacaaaattcaat
ttGACGTTGGTTAACCGTGGTAATTGGTATTGGGATTCAGAGGAGACCAT
CAAGCCATTTGTTCACCATTATGAATGTACAAGAGGTGATGGATTTCGTG
ATTTGTGTACACAGCTCAATGATGGTCTTTTCTATGATGCTATTGTGGAC
TTTAGCTGTTATCATCCCCTAGATATGGAGGATATTTTGATTGTGTTTCG
TGGAAGGTTTGGGAAATACATTTATATCAGTTCTGATTCTGTTTATGAAG
TGTGTCAAGGGAAAAATCATGTGGGATATTCTAAAGAAACTGATGCACTG
AGACCACATGATAAAGCTTTGCAagaaCAGTTAAATAAGAGAGACTCTTA
TGGCCATCGGAAGTTGCAAGGAGAAGAAACCCTTCAAAAGTTCTACCAAA
GATTGAAATTTGACTACATTGCTCTACGTCTACCGGACGTTATTGGTCCT
AGGGACAACACTAACAGATTTTGGAAGTGTTTTCTGTGGACTAAATTCAC
TGATATTATTGGGCCTGTAACTATACCAAAAGAAGTCCAAGATCTTCCTC
TCAGTTTTGTGTATAGTCATGATGTTGCCCAATTAATCTACTCTTTGGCA
GATGAAGTTTACAGCCCTGATGTTTATAATCAAGCTTACAATCTAGGTTT
TAAGAAGTTATATACCCTTAGGAATATATTTCAAGATATGTCATCATTTA
TCGGGAGAGGTTCGGTGAATATTACTGAGGGAGATTTCAGAATTGGTTTC
CCGTCTGTGACAAGAGGCCCTGTGGATATATCAAAAGCAGAAAAGATGCT
AGCCTGGAAGCCAACTCCTATAGAGAAAGCATTGGTTGAAACGATGGAGT
TTTATGATGATGCTCAGTTCAACGGTGATTATAAATACATAATGGATCGT
GTTTTGGAATTTCATGGTGTGTCACGTGACAAATATCGTGAGTTTGTTAT
CCAGCACCATAAGGAGATGGAAAGTAGACAGAAACAggaattatgaATGT
ATACTTTAGAATTGAATTATCAAATGTTGATTTCAACTCTTATAAAAACT
TTGGTAATATTATCAACATGTCagctttgtttttctttgaaaaacatTCT
CATACTTGGTGGTGATGGTATGATGGGGAGTGCAACTACAAAACTTCTGA
TGaagcaaaaaacaaaattcaatttGACGTTGGTTAACCGTGGTAATTGG
TATTGGGATTCAGAGGAGACCATCAAGCCATTTGTTCACCATTATGAATG
TACAAGAGGTGATGGATTTCGTGATTTGTGTACACAGCTCAATGATGGTC
TTTTCTATGATGCTATTGTGGACTTTAGCTGTTATCATCCCCTAGATATG
GAGGATATTTTGATTGTGTTTCGTGGAAGGTTTGGGAAATACATTTATAT
CAGTTCTGATTCTGTTTATGAAGTGTGTCAAGGGAAAAATCATGTGGGAT
ATTCTAAAGAAACTGATGCACTGAGACCACATGATAAAGCTTTGCAagaa
CAGTTAAATAAGAGAGACTCTTATGGCCATCGGAAGTTGCAAGGAGAAGA
AACCCTTCAAAAGTTCTACCAAAGATTGAAATTTGACTACATTGCTCTAC
GTCTACCGGACGTTATTGGTCCTAGGGACAACACTAACAGATTTTGGAAG
TGTTTTCTGTGGACTAAATTCACTGATATTATTGGGCCTGTAACTATACC
AAAAGAAGTCCAAGATCTTCCTCTCAGTTTTGTGTATAGTCATGATGTTG
CCCAATTAATCTACTCTTTGGCAGATGAAGTTTACAGCCCTGATGTTTAT
AATCAAGCTTACAATCTAGGTTTTAAGAAGTTATATACCCTTAGGAATAT
ATTTCAAGATATGTCATCATTTATCGGGAGAGGTTCGGTGAATATTACTG
AGGGAGATTTCAGAATTGGTTTCCCGTCTGTGACAAGAGGCCCTGTGGAT
ATATCAAAAGCAGAAAAGATGCTAGCCTGGAAGCCAACTCCTATAGAGAA
AGCATTGGTTGAAACGATGGAGTTTTATGATGATGCTCAGTTCAACGGTG
ATTATAAATACATAATGGATCGTGTTTTGGAATTTCATGGTGTGTCACGT
GACAAATATCGTGAGTTTGTTATCCAGCACCATAAGGAGATGGAAAGTAG
ACAGAAACAggaattatga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061073-exon-scaffold_354-1491911889:561860..562330 | TCONS_00061073-exon-scaffold_354-1491911889:561860..562330 | Clytia hemisphaerica | exon |
| TCONS_00061073-exon-scaffold_354-1510915933:561860..562330 | TCONS_00061073-exon-scaffold_354-1510915933:561860..562330 | Clytia hemisphaerica | exon |
| TCONS_00061073-exon-scaffold_354-1575043694:561860..562330 | TCONS_00061073-exon-scaffold_354-1575043694:561860..562330 | Clytia hemisphaerica | exon |
| TCONS_00061073-exon-scaffold_354-1491911889:563398..563540 | TCONS_00061073-exon-scaffold_354-1491911889:563398..563540 | Clytia hemisphaerica | exon |
| TCONS_00061073-exon-scaffold_354-1510915933:563398..563540 | TCONS_00061073-exon-scaffold_354-1510915933:563398..563540 | Clytia hemisphaerica | exon |
| TCONS_00061073-exon-scaffold_354-1575043694:563398..563540 | TCONS_00061073-exon-scaffold_354-1575043694:563398..563540 | Clytia hemisphaerica | exon |
| TCONS_00061073-exon-scaffold_354-1491911889:563716..564721 | TCONS_00061073-exon-scaffold_354-1491911889:563716..564721 | Clytia hemisphaerica | exon |
| TCONS_00061073-exon-scaffold_354-1510915933:563716..564721 | TCONS_00061073-exon-scaffold_354-1510915933:563716..564721 | Clytia hemisphaerica | exon |
| TCONS_00061073-exon-scaffold_354-1575043694:563716..564721 | TCONS_00061073-exon-scaffold_354-1575043694:563716..564721 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_354 | supercontig | scaffold_354:561860..564721 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0050662 | coenzyme binding |
| GO:0003824 | catalytic activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003824 |
catalytic activity |
| molecular_function |
GO:0050662 |
coenzyme binding |
Blast
The following BLAST results are available for this feature:
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