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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061072 ID=TCONS_00061072|Name=TCONS_00061072|organism=Clytia hemisphaerica|type=transcript|length=912bp
ccaagcagcctcaatgtttcttaagaaatcggccttttgagccttaaatg
tttcttacatgtttctaaactttttgacataatcagcctcatggaaggct
ggattggaaggttcttaagaaaaaccgaattaaaaaatgctattttctca
tcctcagcctcagcatgtttcttagatgtttcttagtttttaggcattct
gagcctcaagtttcttaaaagtgtgtttcttaaaaaaaaaaaacgtgtac
cagaCAGAAAACGTCCCGAATCAtcatcttttgttttcttctttccagCA
ATCGATCAAACGTGCAAATGGTTTATGAAAAATTATGATACAGCTCGCAA
GTAGGTtagaatagttttcaaaatcgGGTATCGTTCTCGTTTAACACCAC
TGTTTCACAGACCTGGTGGGACTCctgccccactggaaaatctcGCCAAT
ATTTAGTCCCCGGTTGGAAAGATACACTACTGTTTCAGcatcactgggaa
attgactttgatttcatccttatttgaaatttaatggaaAGAATTACACT
CGAAACCATCAAAATGGATTTTCTGAGCTTAGAACAATAGAGCTTATATT
CCCTTTTTGGGATTTCGGtagaaattttcattcccaCTGTAGGAagaagt
ttcaccggggctgtgagacgggGGTTTTATTAATTTCTCCTCAATATGAA
ATTCGGCCAGTCAAACGATCATTcacattttcttaaaataagtTTTCGTG
TGAAGGGGTAAAAAAATAGAGATCTTAACAAGTCTTCTTTAACTTTTGGC
GTGTGTGTATTTTGTAATTTCTGGTATATTTCATCACGTGCTTGAAACGA
TTTTACTTGTCTTTTTTCTGATGATGAGCGATGATGAGCCTTAAggtttt
ttaggatttttg Run BLAST on NCBI transcript from alignment at scaffold_354:551632..552543+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061072 ID=TCONS_00061072|Name=TCONS_00061072|organism=Clytia hemisphaerica|type=transcript|length=912bp|location=Sequence derived from alignment at scaffold_354:551632..552543+ (Clytia hemisphaerica)
ccaagcagcctcaatgtttcttaagaaatcggccttttgagccttaaatg
tttcttacatgtttctaaactttttgacataatcagcctcatggaaggct
ggattggaaggttcttaagaaaaaccgaattaaaaaatgctattttctca
tcctcagcctcagcatgtttcttagatgtttcttagtttttaggcattct
gagcctcaagtttcttaaaagtgtgtttcttaaaaaaaaaaaacgtgtac
cagaCAGAAAACGTCCCGAATCAtcatcttttgttttcttctttccagCA
ATCGATCAAACGTGCAAATGGTTTATGAAAAATTATGATACAGCTCGCAA
GTAGGTtagaatagttttcaaaatcgGGTATCGTTCTCGTTTAACACCAC
TGTTTCACAGACCTGGTGGGACTCctgccccactggaaaatctcGCCAAT
ATTTAGTCCCCGGTTGGAAAGATACACTACTGTTTCAGcatcactgggaa
attgactttgatttcatccttatttgaaatttaatggaaAGAATTACACT
CGAAACCATCAAAATGGATTTTCTGAGCTTAGAACAATAGAGCTTATATT
CCCTTTTTGGGATTTCGGtagaaattttcattcccaCTGTAGGAagaagt
ttcaccggggctgtgagacgggGGTTTTATTAATTTCTCCTCAATATGAA
ATTCGGCCAGTCAAACGATCATTcacattttcttaaaataagtTTTCGTG
TGAAGGGGTAAAAAAATAGAGATCTTAACAAGTCTTCTTTAACTTTTGGC
GTGTGTGTATTTTGTAATTTCTGGTATATTTCATCACGTGCTTGAAACGA
TTTTACTTGTCTTTTTTCTGATGATGAGCGATGATGAGCCTTAAggtttt
ttaggatttttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061072-exon-scaffold_354-1491911889:551632..552543 | TCONS_00061072-exon-scaffold_354-1491911889:551632..552543 | Clytia hemisphaerica | exon |
| TCONS_00061072-exon-scaffold_354-1510915933:551632..552543 | TCONS_00061072-exon-scaffold_354-1510915933:551632..552543 | Clytia hemisphaerica | exon |
| TCONS_00061072-exon-scaffold_354-1575043694:551632..552543 | TCONS_00061072-exon-scaffold_354-1575043694:551632..552543 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_354 | supercontig | scaffold_354:551632..552543 + |
Blast
The following BLAST results are available for this feature:
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