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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061053 ID=TCONS_00061053|Name=TCONS_00061053|organism=Clytia hemisphaerica|type=transcript|length=938bp
CTCAAATAAATCGAGTGAAGACAGCTTCTAGACCAGTGAAAAGTTACGAA
GACCCTTCGAGGAAAAACATGCTTTGTAAATTGAGAAGGTTTTTACAACT
GGCAAAGATATACATGGAGCTGAATTCGTTATGGAACATCAAAGCGCCCG
ATGAAGCAAGGAGGgacatattttgatttttgtaaaaaaacattttacta
aGGTTTATATTTGTGAATTACTTTCATAGTTAATTATCATATTTATTTAG
CGAATGTTCATACGTGATAAaacctaactcaagatatcgGCAAAACATTg
atatttcagttaaaaaatCCGTCGAAAAACACGTCAAAATAATGGTTTCA
AAAGCGTCACTATCGAAAAACACCATTCgacgtcacgcaaaatatgtttt
gttataatttgGACGTTCCTAAACTCACCCGAGTAACCCATTCATACCAT
GAAAAGTATTCATTCCTTTCCTCGGTATCATTGGTGTCATTCTAAGGTTT
CTAATgaccagtggcgtggtgggaaaattttgCTAGGGTGGCCAAGCAGA
ATTTGGCGCcgtttttggagatttttttgttttcggcGCCCTCTCTCTAT
ATACATTTAGTAGAagagtgtgcgagcgaagcgagccagtGAAATTTTGA
GGTGATAAGGGGCGcgatttttggtttttcagtTGCCAATCTTTTGATAG
GGGCGTCTGGAAAATCCTTCTTGGCGCCCCTTCTCAAAAAGGCTCCGCTG
GTGGGCCTGGCCCACCTGGCCCCCCttgccaccacgccactgctAATGAC
ACCTATTTTCCTAATGGGATTTATATGTGGTGAAAGAAGATTTATCAGGA
AGAAATTCTAGATATAAAGTAAGCTGTATATATATTTTAACAATTTAGAT
AATTTTAATTTACTAATAAAAGTATATCTTCATAAAAC Run BLAST on NCBI transcript from alignment at scaffold_354:318435..319750+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061053 ID=TCONS_00061053|Name=TCONS_00061053|organism=Clytia hemisphaerica|type=transcript|length=1316bp|location=Sequence derived from alignment at scaffold_354:318435..319750+ (Clytia hemisphaerica)
CTCAAATAAATCGAGTGAAGACAGCTTCTAGACCAGTGAAAAGTTACGAA
GACCCTTCGAGGAAAAACATGCTTTGTAAATGTAAGTACTCTAAAAAAGC
CAAATTCCTACCCAGACCCCTTGTtcgcttttttatgattctgtaaGCGt
cgaagatttaaaaaatggcGCAAGTGGCTCTTGTGTTGACcaaattttca
tatttactTAGATCAACCGTAAAGGGATCTGGTTCGATTTCGGTAAGGGT
GATTTTACCTGTGAATCTTCGAACACAGATCGATGCATCATTCGAATTCG
AACTCGTTCAGTTTATGGAATAGGCTTGATAATTGTTACCCACATCATGT
TTAAATTCAACGGATTTTTGTTGAATTAATTAttataagataagataaga
aaACTCTTAGATTAATTTTAGTGCTATCcctcaaacattttcattttctt
atcTTTTAGTGAGAAGGTTTTTACAACTGGCAAAGATATACATGGAGCTG
AATTCGTTATGGAACATCAAAGCGCCCGATGAAGCAAGGAGGgacatatt
ttgatttttgtaaaaaaacattttactaaGGTTTATATTTGTGAATTACT
TTCATAGTTAATTATCATATTTATTTAGCGAATGTTCATACGTGATAAaa
cctaactcaagatatcgGCAAAACATTgatatttcagttaaaaaatCCGT
CGAAAAACACGTCAAAATAATGGTTTCAAAAGCGTCACTATCGAAAAACA
CCATTCgacgtcacgcaaaatatgttttgttataatttgGACGTTCCTAA
ACTCACCCGAGTAACCCATTCATACCATGAAAAGTATTCATTCCTTTCCT
CGGTATCATTGGTGTCATTCTAAGGTTTCTAATgaccagtggcgtggtgg
gaaaattttgCTAGGGTGGCCAAGCAGAATTTGGCGCcgtttttggagat
ttttttgttttcggcGCCCTCTCTCTATATACATTTAGTAGAagagtgtg
cgagcgaagcgagccagtGAAATTTTGAGGTGATAAGGGGCGcgattttt
ggtttttcagtTGCCAATCTTTTGATAGGGGCGTCTGGAAAATCCTTCTT
GGCGCCCCTTCTCAAAAAGGCTCCGCTGGTGGGCCTGGCCCACCTGGCCC
CCCttgccaccacgccactgctAATGACACCTATTTTCCTAATGGGATTT
ATATGTGGTGAAAGAAGATTTATCAGGAAGAAATTCTAGATATAAAGTAA
GCTGTATATATATTTTAACAATTTAGATAATTTTAATTTACTAATAAAAG
TATATCTTCATAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061053-exon-scaffold_354-1491911889:318435..318515 | TCONS_00061053-exon-scaffold_354-1491911889:318435..318515 | Clytia hemisphaerica | exon |
| TCONS_00061053-exon-scaffold_354-1510915933:318435..318515 | TCONS_00061053-exon-scaffold_354-1510915933:318435..318515 | Clytia hemisphaerica | exon |
| TCONS_00061053-exon-scaffold_354-1575043694:318435..318515 | TCONS_00061053-exon-scaffold_354-1575043694:318435..318515 | Clytia hemisphaerica | exon |
| TCONS_00061053-exon-scaffold_354-1491911889:318894..319750 | TCONS_00061053-exon-scaffold_354-1491911889:318894..319750 | Clytia hemisphaerica | exon |
| TCONS_00061053-exon-scaffold_354-1510915933:318894..319750 | TCONS_00061053-exon-scaffold_354-1510915933:318894..319750 | Clytia hemisphaerica | exon |
| TCONS_00061053-exon-scaffold_354-1575043694:318894..319750 | TCONS_00061053-exon-scaffold_354-1575043694:318894..319750 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_354 | supercontig | scaffold_354:318435..319750 + |
Blast
The following BLAST results are available for this feature:
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