TCONS_00060999 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060999
Unique NameTCONS_00060999
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2542

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060999 ID=TCONS_00060999|Name=TCONS_00060999|organism=Clytia hemisphaerica|type=transcript|length=2542bp
gaaaaggaaagtgaacgatattctttgaaggaaaaacatcagaaacaaac
ccaaagatcAAAAGacgtattttgttgttgagaatcgatcctgtgaagat
gaaaacaTTTCTGCTATGCgcttttttcggaacgctgaaaaactctaatt
tcaatcttccttaagTCACCACATGGGTCAAGAAACAATGAAGGTCTCTC
GCAAACTTCATGGAATGAATAGGGACAGATTGGTAACAGAATTGAGGAAC
GATGAAAACACAAAGAGTGGAATAGTTGTTATACAAGGAGGCGAATCTGA
AACACTTCATTCAAGTGACAGAGAGGTCGCATTTCGACAGgAATCATACT
TTCACTGGGCATTTGGATGTCGAGAGCCAGACTGTTATGGTGCAATTGAA
GTTGATACAGGAAGATGCATTTTATTTGTTCCTGAACTTCCTCAAGAATA
TATTGTTTGGATGGGACAAATCCATCcaaaagaacattttcagaaGCTCT
ATGAAGTAGATGAAGTTTATTTTACAAACGAGATTGCCAAAGTTCTTGAA
GATAAAAAACCGAAAACACTATTAACATTGAGAGGGCGAAATACAGACAG
TGGTAAATATACGAAAGAAGCTGCATTTGATGGTATCAGCAACTTCACAG
TGAACAATGAAATTCTTTTCCCTGTAATGTCGGAATGtcGTGTATTCAAA
ACTGAATATGAGTTAGACGTCATCAGATATGCAAATAAAATCAGCAGTGA
AGCACATAAAGAGGTGATGAAACATATTCGACCGGGAATGACTGAATACC
AACTAGAAagTTTGTTTCAACATTACTGTTATGCAAGAGGAGGGTGTCGA
TTTGTTTCCTACACTTGTATTTGTGGAAGTGGTACAAACTCGGCAACATT
GCATTATGGACATGCAGGTGCGCCTAATGATAAACTGATTCAAGACGGTG
ATATGTGtttATTTGATATGGGAGGTGAATATTACTGTTACACCTCAGAC
ATCACTTGTTCTTTCCCAGCAAATGGAAAGTTTACAGAACAGCAGAAGGG
AATTTATAATGCGGTTTTGAAATCGAGTCGAGCTGTTTTGAACAGCGTAA
AACCAGGGGTCAGTTGGAAAGAAATGCACTTACTTGCCGACAAAACAAAC
TTGGAAGAGATGAAGAAACTTGGAATCGTCCAAGGAGATGTCGATGAAAT
GATGAAAGTTCGTTTAGGTGCTGTCTTCATGCCTCATGGCTTGGGACATT
TTATGGGCTGTGATGTCCATGATGTTCATGGATACCCTGATGGCGACAAA
GAACACAGACCAAAGGAAGAAGGATTAAAAAGTTTACGAACAACACGTAC
TTTACAACAAAGCATGGTTCTCACCATCGAACCTGGAATTTACTTTATTG
AACAGTGGATTCGACGTGCACTTGCCAACCCAGCTCAAGCTTGTTTCATT
GTACAAAATGTCGTGGAGCAATACTTTAATTTCGGTGGGGTGAGAATCGA
AGACGACATAGCGGTGACAGAGGAAGGGTGTGAACTGATGACCAATGTTC
CCAGGACTGTCGAAGAAATTGAATCACTCATGGCTGAAGGACGCCAATCC
AACGTCAAAGTTATGTTTTAAGTCTGTTTGATGATAAATATCTTAAACTT
CACGTGCGCCGAAAACACCGACCATCATAATCAAGCAAATTCGACGTTCC
TGGATCAGTGATAACTGTTGAAATGCGGTTTATTTGACTTAAAACTGGTT
AGATATAAGGTACTTTCTCTGGGTTAAGCTGGAGTCAAAGCTACCAAGAA
AAAAAAGGATAGCTTTCTATAAACTCAATGTGTTTTTCAGATCTGGATCG
TGGATGGTTGTAATTACCTGTTTTTTTTAGACTAAATAAtgagtttaaag
tagttttgctGGATAATTATTTGAACTATTGGTACGGAATATTCCTTATC
TAGAAATCATATTTCCATACTTCCACACATGGGGGTGTTTCTTCCGATGG
ATGTGCATTTTGAATAATTCATGTTGTATGTGTAGCATAGGGTTTTAGGG
TGTGTTAGACAATTGAATAAGGCCGACACCCTTTCTTTTTGGTTAAGTCT
ATTGTTGTTTCATTAAAACTGTAAAGAACGACAAAACAAAAACTTCGTCC
TAATAAAAAGGAACCTAAAAACATTTTGTATTGCTTGCGgctttttttaa
acaagaaTAACTCTAAAAGGAAATAGGGTGTGTTTTTGTTTTGGCTTTCT
TCTTCTTGAGGTTTTACCACTTCCAGTTTTGTAATGTTTGCAGGAATAAA
ATTCACGGAATTATTGNactgtatgtactactgatgaactaaactcaaaa
actaaaactttaccataaatttacattacgacaatttaaaaatctatctt
taatagcaacaaagaaataaacatggctcaaagttttaaaagcagagcta
gtcagagcttcaattcagtaggtatagagctttcaaaatttgaaaacaga
cactgcattggttactacaagacatactatccacacggtttt
Run BLAST on NCBI

transcript from alignment at scaffold_352:100691..111457+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060999 ID=TCONS_00060999|Name=TCONS_00060999|organism=Clytia hemisphaerica|type=transcript|length=10767bp|location=Sequence derived from alignment at scaffold_352:100691..111457+ (Clytia hemisphaerica)
gaaaaggaaagtgaacgatattctttgaaggaaaaacatcagaaacaaac
ccaaagatcAAAAGacgtattttgttgttgagaatcgatcctgtgaagat
gaaaacaTTTCTGCTATGCgcttttttcggaacgctgaaaaactctaatt
tcaatcttccttaaggtaaagaggttgcaagatttgggttagcgaggcaa
aaatcgctaaaaagctggtaaaatcgtaatcctcaaaaatcaaagttcca
gcctcactgtttTGGCTTTACCACCCTCAGAGCAGTAGGCACCTCTGTCA
NCAGCCTCACTGTTTTGGCTTTACCACCCTCAAAGCAGTAGGCACCTCTG
TCATTccgcaactctgtccaccattCTAAATGGCttgttaacaatagatc
caaatgATCCTTTGAGGCAAAATCAATTtcaggaaaagctggaaaatcAT
AGAAacttccaaaaattgaaaatgcatGAGAAATCAAATTGTTCAAAAGT
TGTCTCTACTCTAAATCAtcataattaaaattttttgatgctTCTATCAT
GTAGTCACCACATGGGTCAAGAAACAATGAAGGTCTCTCGCAAACTTCAT
GGAATGAATAGGGACAGATTGGTAACAGAATTGAGGAACGATGAAAACAC
AAAGAGTGGAATAGTTGTTATACAAGGAGGCGAATCTGAAACACTTCATT
CAAGTGACAGAGAGGTCGCATTTCGACAGGTAAATATatttatattaaat
atataGATTTATTTAAGCCATTTTCACTAACAAAGTATTCATTCAACTTC
GCATTCCCATGCAAATGGTTCTagcaaagtgtttttttttttacatacaa
GTTGAAAAGTTATAACTTAGAATTAGAATTTCTACAGTTTGACAGTTCAA
AGCTAACAAAATGATATCATGTAAAGCTATATAGTTAAAATTTCTTGACA
CTTTGACAGGGTATACTGTTTTGCTTTTCCAGAATAGAGCTACTACCAGT
ATCATATtccaatcaatttttttcattcaaggAATCATACTTTCACTGGG
CATTTGGATGTCGAGAGCCAGACTGTTATGGTGCAATTGAAGTTGATACA
GGAAGATGCATTTTATTTGTTCCTGAACTTCCTCAAGAATATATTGTTTG
GATGGGACAGTATGAGATTTTGTTTCTATCATCTTTTTATATATAGCACT
TAAAATAATGGTGGGACATGggcattgtccgacccaaatagctCCTTGTC
CAACCCTAgaattataatttttataattttctctAATCAGACATTTTTTG
CGATCActtatttttttaagcttatgagtTATTCCAAGCCATCTTTATAT
TAATGAGCATAGAATTTCTAATAGACAGACTATTTGGATTAAGAAAAAGT
ATGATATAATATACATTATTGAATCTGAAAATCTAGTTCCACTGTTTGTT
TTCTAGAATCCATCcaaaagaacattttcagaaGCTCTATGAAGTAGATG
AAGTTTATTTTACAAACGAGGTAtgcctttcaattttttgagaaaCAAGA
CAATCTTTCATCGGATAGATTCTTCTGGAGAACCGTAAATCGAGACCAGA
AAAAAACCTTTTATACGCTTTCTACATGAATGAAATAATGACATCATTTT
GATAAATCATTGCCTTGTCTTTAGATTGCCAAAGTTCTTGAAGATAAAAA
ACCGAAAACACTATTAACATTGGTAAGAAAAATTGATCTCAGTTAAATCA
ACTCCCAAAGATCTCCAAAAATCTTCATTGATTCACTATTCAAAATATGA
TCTGTTAACTACACCAAGAATGGATTAAAGGATTTCTTGTGGGAAATTAC
TCCAAAATCAAAGCATTTGCTAAGATTCTTATAAGTGATTACTAGaaaat
tgtatttatttttgaaaattacttaCCATTGAGGTCATTTTTGGGTAaat
tccatacaggggggtggacgaaccttttcaagtcaaaacaaaTTACTTGG
AAATGTGTGAATACCCCTtgtaaaatggcaaaatttgcaaaaaagaccct
ggaaaaaattattttcatgtcttgaagtgagggtggacgaactaatattt
taccccctggaagttCAAGAATAGCTTTTTACCCcttgaaagaatgacaa
aacaCTTCTTTAGACTTTCTGGAAATTCGTTTCAGATTACCCCCGGAAAA
ATTTCgaccaccccctgtatggatataaaatggaatggcccattttggcT
TTTGTAGCAAGTACATTCACTGAGTTGATAAGTTAAAACTTCTGAACAAA
ATACTGTCTTTGTTGTTTGAAAGAGATAGGAAAcacataaatataaaaac
ataattGAAATACTCAAAATATTTGTCTTAATGTAATTTCACAGAGAGGG
CGAAATACAGACAGTGGTAAATATACGAAAGAAGCTGCATTTGATGGTAT
CAGCAAGTATGACacatttttagacttatttTGCTGGAAACTAAACAAGA
CACTCTTTAGGACTTTTTTCGCCCAAAAATGGATTACTTTTCGTAAAAGT
TTTAAGAAAGGTGCATCAGGATTCAAAATTTGACAAATCTATTTCTCTTT
TGTTAGtacttactcttgtctcccgaatagacgtcccccttgctaattgt
taagagaaaaaaatccatccccccgctcttattaagacccccctcCTGct
aatcaaattcaaaaaattcaatattttattactgtgtagatagaccttaa
aaaaacttgttaaaatttttctttttttagtattggttcttattttacgt
gttcatttgttaaagttttttgttgttgttgaaattgatatcagttaaaa
aaattctgtcttcaaattaccccctccctcttattccatccccctgCTTA
taagaatttagaaaaatttcctaccccctgcttatttgggcccccgtcta
ttcgggagacaagagtacctACTTTGTGAAGTCAATTAacttcttttgtt
gtttttatgtaATTCTGTGTTAAGAAATTTGGTCGttgatctttattttt
ctagcaaataaaacttttaaactttcttttttagCTTCACAGTGAACAAT
GAAATTCTTTTCCCTGTAATGTCGGAATGGTAAGATTTTTTCCTGGTTAA
ACATGAATTCCGGTTAGATATTCTAGCTTATAATTTTTCCACTGCGTCTC
TTCTTATAACCTTTTAAATCTaagtcaaaaataatcatttttgaaaacta
taaaATCACGCAAAAATGAGGTAATAAATTTCATGAATAAGAAAAAGGTT
CTGTACAGTCTACAGTCGTGGTAAGATATTGGGAAACATAGCGTACTTAT
TTTCTTGGAATAATGATACAATCGTAAAAATACCTTTTAGGGAAAAACTT
ATTTGGGTAAAATTTAGTCACACAGGTAAAATTTAAGCCAGGAAAGATTT
CGTCACTTTTGTGAATGTCTTGGCCACGACTCATTTGAAGTTGACTAGAA
AGGTTGCCGTGGAAAACTTCGTCACTTGTGTAAGCACTTTATAGAAACcc
ttataatttttatttcattttagtcGTGTATTCAAAACTGAATATGAGTT
AGACGTCATCAGATATGCAAATAAAATCAGCAGTGAAGCACATAAAGAGG
TTAGAGATGacgttttttcatttctttttgtttatttctataGAAAAACC
TATCGATCTAATTTAAAAGGCCTAACAACACTTACTGTGTCTTTTTCCAA
TAACAAGCTATTTTTCGAATCTTCAATGGAAATGTTTTGTTAAACCTTCA
AAGGACAATgtattttttggatgtttttaatcTCTGTGACCTCATTTCAT
CAGGTGATGAAACATATTCGACCGGGAATGACTGAATACCAACTAGAAag
gtaaaattcaaaatttttgaagcctttagatgttcttgacttttttagtt
ttaagcctaaaaatgttcttaacatgttcttgttttcgccattttttgag
catttttgtcatttttcttaagaaatcaggttctttagagtccgcgaagt
cttaaaatgttcttaatatgttcttaacattttagccatcaaagcctcat
gttcttatatagtttgttcttataaaaaaatgtgtatactAATTCCCTTG
AGAGCGGGTTTCACATGGCGGCAAAGTAGAGTGCACAGTAAAATCAAATG
AACTTTAGCTCTCTTGATCTAGATGTTTTTAGTAATTGAATCTGTTTTGA
AAAACAGCTCCCGAAATAAAGATGGGGTTCTTTGGAACTCTTAACTGTAC
ATCTTGAAATATAAGTCATCTCATTTTATACGGAGGATCAGTCAATCTAT
TAAATATGTATTTCATGAACGTAAGTGGTTTTGAAACTTCACCGAGCAAT
ACTAGagtataaaaaaaaagaagaaatagtctagcaagctagacgactaa
ttcagacatagtagacaTAAAGCAagaagtaatggagggaacaagttaaa
tcccgtaacaataatcgtattatcatataaacGACCCCATTCTACTTGTA
AAAAAGTTTATCCTCCAAATTTGCTTTTCAGTTTGTTTCAACATTACTGT
TATGCAAGAGGAGGGTGTCGATTTGTTTCCTACACTTGTATTTGTGGAAG
GTATGTCATTCGAgttcattttcatatttttttacaGTTTATTCCAACAT
TATTGTTATGTTCGCGGAGGATGTCGATTTCTGGCATATACCTGTGTCTG
TGGAAGGTatcttttaaagggacataaaagtactgacgaaatttgtaaac
aaaccgcatgcagcgggatacaaaatcaaaacaaatgtcacatgtcaaaa
taaaaaacaaaacaaacatggctgattttgattgtttcaattgttttgcg
agtttgttttggacacgtgattttaattgttctcttttaTGACACGttgt
tcgcgcaatgtttacattttactacttttatgtccctttaaactttgtga
tttttttttaagttttcagCTTTTTGACGATCTAACTTTTAACTCTTTTG
GGATAAAATAGATTTGTTGATTTGAAGTTCCTACTTTCCACCTatttatc
aaagaaaaaacattgagTGACTTGCACTGGCACTCTTGAACCTACACTGA
AAGAATCACGGAAATCATAAAAgataataacaaaaataatagTTCTTAAT
TCAAAACTTTGCTCATATAAGATTTTGAAATTGCAATGAAAGACTAAAAG
CAGATCAGGTGCACTTATCGGTACCCAAGGTAACATTCTATACCAGTGAA
ATCTGGTCAGTAAATTGAATAAAAGCATTCTTAGTTAACATTTTTTACCA
GCGTTTTTACTGGTAAAATGCTACATTGGGTACCCATAGGTGCATCTGAT
CCTTAAAAGCATTATCTACATAATTTCCCAGACCTTAAGCAACTTTCTGT
GCAATATTTGATACAGTCAAGAAGCTTGATATCGACGAGTGAAGCTTTTA
CAAAGTAGGCATCTTGGCCTGCTTGGCTATGTTCAAATGGTACAAGTACT
TAACtttgtttctttctttatcCTTTAAGTGGTACAAACTCGGCAACATT
GCATTATGGACATGCAGGTGCGCCTAATGATAAACTGATTCAAGACGGTG
ATATGTGGTGAGTTTTTGCCCCATGTTTACATCTAAACCTTACCATTAGT
AAGGTTTCTGGACACATCATTTAAATCAAagtctttcgaaaaaaaaaata
attatggtATTCTGTAGGTTTGCAAAATTACAGCCTCCTTTATCTACTTC
TCTTCAGCCTTGGTAGTATTTTATTGAGGACTGAAATTTGTAGATTTAAT
GATTTTTCGACACTGTAGTACCCTTTTATGCTGGAAGAACATACCCATTT
ACCCATTGCTATACGTTTTCCCAGGCAAACCCTTAGGTTTAAGGCAGTTT
TTAAGCTTTAAATTAAAGATAAAGTGGCTGTAGCTTGGGGAAAGAGCATC
CAGCTACAGTACACAACCACAGATATCTGTAAAGCccgaagggctagatt
tgcggccttggtcaaaaagtgaagctcatctttggaaggatttcctacca
gagtcacgtgactaaaatatgcaatttcaccggtatgagagatgcgaaat
agcgtttgccgcctacgttttttgatctcgcgctccgaaaacaattaaaa
tgctagatcctatccatcggcacgaaatttaaaaagtcaaatttttgctt
cacttttttttgctggagaaagcttaaagttgcctatctagcccttcggg
cttagatatctgtgtaCACAACACAACCTtgtgcaccgtagctggatgcc
aGCCAGGTCATACCAAAGGTAACAAAATGGTAATTGATATCTCTCTGCTT
GTTGgacagcaactaaagagacggatcaaagGTAATGGAGAAATTCAGGG
AAAGGaatggcgccctcccctaccttcaggtagaaacttagagaaaaggg
agccttcagGTTGCGTCCGACTGTGGTCGCAGACTGACTTATTTTAGTCT
TAAACCtattattgaaaataaagagggaaagtataatttttatattttgt
tttcatattttcagtttATTTGATATGGGAGGTGAATATTACTGTTACAC
CTCAGACATCACTTGTTCTTTCCCAGCAAATGGAAAGTTTACAGAACAGC
AGAAGGGAATTTATAATGCGGTTTTGAAATCGAGTCGAGCTGTTTTGAAC
AGCGTAAAACCAGGTAATAACTCTCTTCCTAAGTTAAACTGTTTGGCTCT
TATAATCAAAGAGCAAATGTGATTTAAATGAAGGGAGGGTTTAGCTATAG
GGATATAATATGATACACTAGAGTCTTCATAaatcgaacctctataattc
gaatatctccttaactcgaaaaagtgaTCCCTTCAGTTACCagtctccgt
aactcgaaatttccaaaattcaaacaaattcgTTTTCCCCATGCtcgttt
gagttatggagacgcCACTGTATATGAACATAATATGGAATAGGCTAGCA
GAGTTAAgaccctaaaatagcttttaataTACCCAGGGTCGTTGTTGTTG
gatgatttttgaagattttttgcaTGTGCAAGTCATGATACGGTCAATTG
ATGTTTTGTAACATTAAAGTGTATTAAAAGTGTATTAAGAATCTCTTTGG
CTATAGaggtcccggggggggggggggtactaggttttgCGAGGTTTGCt
aataattgaaaaaatatatcataTGTCTGAGCGAAATTTCTAAAATCGAT
CCTTTGAGAACTGAATTTCGATGTTTATGCCTCTCTTTGAGaaactattt
tttcaatttgtaGCTCAAAATAACCAgattttatgaccctttgagggagt
cgatttttgatatttcataattttggaccctttcagagacttaattgctc
gcacatacccgacatCCCCCCCCGGGTAGAGGTTTTTCAGGTTGACAAAG
TTACGTAGTTACCATTATGgaagaaaacattgattttttCGCAAGGAGTT
GTCTCtacaaattcgaaaaatgttacacgtttttttaagaacatccaaat
tttttgaagccttcggatgttcttaactttttgagttttaagccatgttt
tatgttcttatttttgtcattttgtgagtattttagtccaatttcctaag
aaattggtcgtttagagtccgcaaaaccttaaaatgttctaagttgttct
taatattttggccatcaaagtctaatgttcttatatagtttgttcttgta
aaaaaaatgtgttattTTTCTAAGGGGTCAGTTGGAAAGAAATGCACTTA
CTTGCCGACAAAACAAACTTGGAAGAGATGAAGAAACTTGGAATCGTCCA
AGGAGATGTCGATGAAATGATGAAAGTTCGTTTAGGTGCTGTCTTCATGC
CTCATGGCTTGGGACATTTTATGGGCTGTGATGTCCATGATGTTCATGGA
TACCCTGATGTAAGTTTTCTATAGAAAAGGTTGTTAAAATTGTTTGAGAT
ATCAAGACAAAATAAAGGGTAACGGTCTGTCTTCATGCCTCATGGTTTGG
GTCATTTTATGGGCTACGATGTCCATGATGTTCATGGATACCCCGATGTA
AGTTTCCTATagaaaaaactgttaaaatagtTTGGGATATCGAGACAAAA
TAAAGAATTAAATTCTGTTTGAGAATTGTTGCTCTGTATCAAAGTTCAGG
TTATTTTATGGGCTGTGTTAACCACGATGTTCATGGTTACCCTGATGTAA
GTTTCCTATAGAAAAGTCTGCTAAAATTGTTAGGGATATTGAGACAAAAC
AAAGGATAGTAGTATGTTTGGAAATTTCGTCACGGTTTGGGTCATTTTAC
GGGCTGGGATATCCGTGATGTTCATGGGTACCATGATGTAACTTTCCTAT
AGAAGAGACTGTTAAGATATATCAAGACAAATCAAAGAATGAGAGTCTGT
TTGAGAATTTTGCTCTGCATCACGGTTTTGATTATTTGATGGGGTGTTGA
GTAATACAACTCTAAATCAATTAAAGCATTATGCTGCTCTGGGCTACTTT
AGATAAtgtttcacctttcaaagttttCTTCTTGGCTTAGATTTTAAGCA
TAGATTTCCAGAAGTATCGTCAGTCATGTGGTGATATCTCGATAATTATT
CACAGAATATTTGATTTATCCACCACAGGGCGACAAAGAACACAGACCAA
AGGAAGAAGGATTAAAAAGTTTACGAACAACACGTACTTTACAACAAAGC
ATGGTTCTCACCATCGAACCTGGAATTTACTTTATTGAACAGGTACAATG
GAATTCTAGTGTAAAAAAGCTCTTATCAACTCGAAAGGATTGTATGTACG
AAGGCTGTCAACATCCCTCTAATGCGTTTTGttataaaatctttttcaag
aATAAACACAGCCTAGGTTTACGAACGTAAATTTCGTTAACCTCCAATAA
TTTACTGtgcaatttaaaaaatcttggccaaaagttttataaaaacattg
gCCTCgactaaaaaaaaacttaaaaagctAATTTTGAAAACACTTCCAGC
TTTTCAAAGTAGTTTAGTCAACATAGGTCTATtgtgagaacattttaaga
aaatgttAGCCTGCATTTATAGCCTATTATTATACAAATCAATaactaaa
attgttcttcttctttttccagTGGATTCGACGTGCACTTGCCAACCCAG
CTCAAGCTTGTTTCATTGTACAAAATGTCGTGGAGCAATACTTTAATTTC
GGTGGGGTAAGGATCATTTCGTTCATTGATATCGGGGGGTATAGTCTGGT
CCGGTCAATTTGTAATTTAAGCTAGTTGCTTAAGTTTGTACTTCTATATT
ATGTGTGGTTTCAGTTCAACCTCAAATTAAGTCGAATCAGGATgcgaaag
tttttgaaattcacCTGGCTAGACACAACCCTAAGAggattcattttcaa
attttcatttttgtgaaatttatcctggtgaaaatttaaaatcaggattt
tttgccaaaactcGTATGAGAATTAAAGAAATTAggtgaaaaagaggctg
attcgcaaaattttgtCAACGCGAAAAGTTTAGTTCTTCGATTCGCGAAA
AAAGGTTCGTGCGAAAATCTATTCACTTAGATAAAACAATTACCTTACTA
TATCTCATTAACAGGTGAGAATCGAAGACGACATAGCGGTGACAGAGGAA
GGGTGTGAACTGATGACCAATGTTCCCAGGACTGTCGAAGAAATTGAATC
ACTCATGGCTGAAGGACGCCAATCCAACGTCAAAGTTATGTTTTAAGTCT
GTTTGATGATAAATATCTTAAACTTCACGTGCGCCGAAAACACCGACCAT
CATAATCAAGCAAATTCGACGTTCCTGGATCAGTGATAACTGTTGAAATG
CGGTTTATTTGACTTAAAACTGGTTAGATATAAGGTACTTTCTCTGGGTT
AAGCTGGAGTCAAAGCTACCAAGAAAAAAAAGGATAGCTTTCTATAAACT
CAATGTGTTTTTCAGATCTGGATCGTGGATGGTTGTAATTACCTGTTTTT
TTTAGACTAAATAAtgagtttaaagtagttttgctGGATAATTATTTGAA
CTATTGGTACGGAATATTCCTTATCTAGAAATCATATTTCCATACTTCCA
CACATGGGGGTGTTTCTTCCGATGGATGTGCATTTTGAATAATTCATGTT
GTATGTGTAGCATAGGGTTTTAGGGTGTGTTAGACAATTGAATAAGGCCG
ACACCCTTTCTTTTTGGTTAAGTCTATTGTTGTTTCATTAAAACTGTAAA
GAACGACAAAACAAAAACTTCGTCCTAATAAAAAGGAACCTAAAAACATT
TTGTATTGCTTGCGgctttttttaaacaagaaTAACTCTAAAAGGAAATA
GGGTGTGTTTTTGTTTTGGCTTTCTTCTTCTTGAGGTTTTACCACTTCCA
GTTTTGTAATGTTTGCAGGAATAAAATTCACGGAATTATTGNactgtatg
tactactgatgaactaaactcaaaaactaaaactttaccataaatttaca
ttacgacaatttaaaaatctatctttaatagcaacaaagaaataaacatg
gctcaaagttttaaaagcagagctagtcagagcttcaattcagtaggtat
agagctttcaaaatttgaaaacagacactgcattggttactacaagacat
actatccacacggtttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038294XLOC_038294Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060999-exon-scaffold_352-1491911889:100691..100855TCONS_00060999-exon-scaffold_352-1491911889:100691..100855Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:100691..100855TCONS_00060999-exon-scaffold_352-1510915933:100691..100855Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:100691..100855TCONS_00060999-exon-scaffold_352-1575043694:100691..100855Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1491911889:101245..101419TCONS_00060999-exon-scaffold_352-1491911889:101245..101419Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:101245..101419TCONS_00060999-exon-scaffold_352-1510915933:101245..101419Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:101245..101419TCONS_00060999-exon-scaffold_352-1575043694:101245..101419Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1491911889:101722..101849TCONS_00060999-exon-scaffold_352-1491911889:101722..101849Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:101722..101849TCONS_00060999-exon-scaffold_352-1510915933:101722..101849Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:101722..101849TCONS_00060999-exon-scaffold_352-1575043694:101722..101849Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1491911889:102147..102210TCONS_00060999-exon-scaffold_352-1491911889:102147..102210Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:102147..102210TCONS_00060999-exon-scaffold_352-1510915933:102147..102210Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:102147..102210TCONS_00060999-exon-scaffold_352-1575043694:102147..102210Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1491911889:102365..102412TCONS_00060999-exon-scaffold_352-1491911889:102365..102412Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:102365..102412TCONS_00060999-exon-scaffold_352-1510915933:102365..102412Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:102365..102412TCONS_00060999-exon-scaffold_352-1575043694:102365..102412Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1491911889:103085..103146TCONS_00060999-exon-scaffold_352-1491911889:103085..103146Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:103085..103146TCONS_00060999-exon-scaffold_352-1510915933:103085..103146Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:103085..103146TCONS_00060999-exon-scaffold_352-1575043694:103085..103146Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1491911889:103775..103819TCONS_00060999-exon-scaffold_352-1491911889:103775..103819Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:103775..103819TCONS_00060999-exon-scaffold_352-1510915933:103775..103819Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:103775..103819TCONS_00060999-exon-scaffold_352-1575043694:103775..103819Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1491911889:104264..104339TCONS_00060999-exon-scaffold_352-1491911889:104264..104339Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:104264..104339TCONS_00060999-exon-scaffold_352-1510915933:104264..104339Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:104264..104339TCONS_00060999-exon-scaffold_352-1575043694:104264..104339Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1491911889:104544..104590TCONS_00060999-exon-scaffold_352-1491911889:104544..104590Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:104544..104590TCONS_00060999-exon-scaffold_352-1510915933:104544..104590Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:104544..104590TCONS_00060999-exon-scaffold_352-1575043694:104544..104590Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1491911889:105272..105340TCONS_00060999-exon-scaffold_352-1491911889:105272..105340Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:105272..105340TCONS_00060999-exon-scaffold_352-1510915933:105272..105340Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:105272..105340TCONS_00060999-exon-scaffold_352-1575043694:105272..105340Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1491911889:106270..106347TCONS_00060999-exon-scaffold_352-1491911889:106270..106347Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:106270..106347TCONS_00060999-exon-scaffold_352-1510915933:106270..106347Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:106270..106347TCONS_00060999-exon-scaffold_352-1575043694:106270..106347Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1491911889:107305..107453TCONS_00060999-exon-scaffold_352-1491911889:107305..107453Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:107305..107453TCONS_00060999-exon-scaffold_352-1510915933:107305..107453Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:107305..107453TCONS_00060999-exon-scaffold_352-1575043694:107305..107453Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1491911889:108515..108699TCONS_00060999-exon-scaffold_352-1491911889:108515..108699Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:108515..108699TCONS_00060999-exon-scaffold_352-1510915933:108515..108699Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:108515..108699TCONS_00060999-exon-scaffold_352-1575043694:108515..108699Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1491911889:109419..109532TCONS_00060999-exon-scaffold_352-1491911889:109419..109532Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:109419..109532TCONS_00060999-exon-scaffold_352-1510915933:109419..109532Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:109419..109532TCONS_00060999-exon-scaffold_352-1575043694:109419..109532Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1491911889:109913..109996TCONS_00060999-exon-scaffold_352-1491911889:109913..109996Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:109913..109996TCONS_00060999-exon-scaffold_352-1510915933:109913..109996Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:109913..109996TCONS_00060999-exon-scaffold_352-1575043694:109913..109996Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1491911889:110405..111457TCONS_00060999-exon-scaffold_352-1491911889:110405..111457Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1510915933:110405..111457TCONS_00060999-exon-scaffold_352-1510915933:110405..111457Clytia hemisphaericaexon
TCONS_00060999-exon-scaffold_352-1575043694:110405..111457TCONS_00060999-exon-scaffold_352-1575043694:110405..111457Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_352supercontigscaffold_352:100691..111457 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.6543	32.0681	37.9966	35.9842	33.2344	28.1204	35.6553	39.2867	27.649	31.7914	34.5952	28.1061	32.4987	33.5416	37.3901	41.7655	37.6622	45.1458	17.9858	25.3518	36.5813	39.3004	26.1053	27.8306	34.2653	43.4075	25.742	32.1217	21.8428	19.7032
Blast
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BLAST of TCONS_00060999 vs. Swiss-Prot (Human)
Match: PEPD (Xaa-Pro dipeptidase OS=Homo sapiens GN=PEPD PE=1 SV=3)

HSP 1 Score: 630.558 bits (1625), Expect = 0.000e+0
Identity = 297/475 (62.53%), Postives = 365/475 (76.84%), Query Frame = 2 
Query:  164 SHHMGQETMKVSRKLHGMNRDRLVTELRNDENTKSG-IVVIQGGESETLHSSDREVAFRQESYFHWAFGCREPDCYGAIEVDTGRCILFVPELPQEYIVWMGQIHPKEHFQKLYEVDEVYFTNEIAKVLEDKKPKTLLTLRGRNTDSGKYTKEAAFDGISNFTVNNEILFPVMSECRVFKTEYELDVIRYANKISSEAHKEVMKHIRPGMTEYQLESLFQHYCYARGGCRFVSYTCICGSGTNSATLHYGHAGAPNDKLIQDGDMCLFDMGGEYYCYTSDITCSFPANGKFTEQQKGIYNAVLKSSRAVLNSVKPGVSWKEMHLLADKTNLEEMKKLGIVQGDVDEMMKVRLGAVFMPHGLGHFMGCDVHDVHGYPDGDKEHRPKEEGLKSLRTTRTLQQSMVLTIEPGIYFIEQWIRRALANPAQACFIVQNVVEQYFNFGGVRIEDDIAVTEEGCELMTNVPRTVEEIESLMA 1585
            S  +G ET+KV   L  +NR RL   LR +   ++G IVV+QGGE    + +D  V FRQES+FHWAFG  EP CYG I+VDTG+  LFVP LP  +  WMG+IH KEHF++ Y VD+V + +EIA VL  +KP  LLTLRG NTDSG   +EA+FDGIS F VNN IL P + ECRVFKT+ EL+V+RY NKISSEAH+EVMK ++ GM EY+LESLF+HYCY+RGG R  SYTCICGSG NSA LHYGHAGAPND+ IQ+GDMCLFDMGGEYYC+ SDITCSFPANGKFT  QK +Y AVL+SSRAV+ ++KPGV W +MH LAD+ +LEE+  +GI+ G VD M++  LGAVFMPHGLGHF+G DVHDV GYP+G +  R  E GL+SLRT R LQ  MVLT+EPGIYFI+  +  ALA+PA+A F+ + V++++  FGGVRIE+D+ VT+ G EL+T VPRTVEEIE+ MA
Sbjct:    8 SFWLGNETLKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQKPSVLLTLRGVNTDSGSVCREASFDGISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVE--RIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEEIEACMA 480
The following BLAST results are available for this feature:
BLAST of TCONS_00060999 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PEPD0.000e+062.53Xaa-Pro dipeptidase OS=Homo sapiens GN=PEPD PE=1 S... [more]
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