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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060972 ID=TCONS_00060972|Name=TCONS_00060972|organism=Clytia hemisphaerica|type=transcript|length=1733bp
attattttgaaatcttttcgaATCTTTCCTTAGTCTTGTTCAATATATCT
TGTTTTCTTGACGGCTTGCTATCAATCGGTGCAGTAGAACCGAACCCCAA
CCCTTTGTTTTTTCCATGCACTTGCACGCCAATTGGCTCTGCAATACCTT
GTTGTGATTTGCCAAGCCCTTCGCCAGATTTCCATCCCATTTTAGCCAGC
ATCTTATGTCCGATATTCTCATCAGATATTTCTTTATGTACAGATGCTTT
TTCGACTGGTCTCAAAATATTCTCATAAGGATCACTCCCGACTTCCTTAC
GACGTCTTGCTGCACGATCGGGAACAGATTCGATCAATTTTTTAGGATCT
TAGCATGAGAGCGACTGGCGAGCTCATCATCAGCTAAACAAATAGTATTT
GAGGGGTCTTTCCCAATGCTTCCTCCCTGACAAGTCACTATGTATAAAGA
ACCAACATCAACTGATTCGGATTTGACGATCATAGCCCTGATGCACGGGT
CAATAACTGGAGTAGGACCTGCAGGTGACACAGGTTCAGAACGAATTTCA
CCATCTGATAGTTGGCCATCTTTCTGATCATTCGAGTCAGATTCATCTGT
CTTTTCCTCAGCAACTTTAATTTGGGAGTGAAATATATACGTTTCTTTTT
CTTGATCGTAGTAATAGTATACACCATTCTTGTGGTCATAGTACAGCTGA
CTGTTTGGATCATAATACATTCCACTTTGCCAGTTGTAATACATTCCAGA
ACTTTCATCGTAAGCAAATCCAGATTTGGACATTGCTTCTTCTGCAGCAT
TTCTGAGCTCTTCTTCAATATTCAAAGTACCTCCCTCTTTAGTTGTCTCA
TCTTCCTCTTTCAGATTTGGTGGCTCTACAATTTTTATTCTCTCGGTATT
TAGTTTGTCCACCTTCCCATTTTCAGAAATGGTAGAGTTNTTCTTCTGTT
GTATCATCTTCCTCTTTCAGATTTGGTGGCTCTACAACTTTTTCTCTCTC
GGTATTTAGTTTCTCCACCTTTCCATTTTCAGAAACGGTAGAGTTGTCAG
TTTCTTTTTTCTCCTCCTTAACAATTTTCTCAATATCCGTTCGCTTTTGT
TTACAAATATTACTAGATTCTTTATTAGAAGATTTACCATTGGGCTTTTG
AACAATGTCAGTTTTTGGGATTTGATgagtttttgtcaattttcggcGAG
TTGAAAGCTTCTTGGCGGAAGTAGAATCTCCATAAACAACAGCTTCTTTC
ATTTTAGTAACACTTTCAGAGGGAGCATCTTTAGGCTTAAATTCATCATT
ATCATGCTTCAGTGTTTTAATTTCCACATTCAATTCATTTAATCTCTGTG
ACATTTGATTGTTGAATTCAGTCATTTGTTGCATTTGTGCGTAGACTGTT
GATTGCCATTGCTTTGACTCCTCTAGAGATTTGTATAAAGCATGGACAGT
TTGTTTAAGTTCATCTATctccttttcatttttcttgctGTTNGCGTAGA
CTGTCGATTGCCATTGCTTTGACTCCTCAAGAGATTTGTATAAAACATGG
ACAGTTTGTTTAAGTTCATCTatctcattttcatttttcttgctGTTTTC
CCCAGCCCTCTTCAATTCAAGCCTCATTCTTTTGATCAAATCTTTCTCTT
CTAATTCCTCAGACTCTGGaagataaattttgaaaaaaatattgattaat
ttcaaactttaatgAAACTTGTATATGGTGTAT Run BLAST on NCBI transcript from alignment at scaffold_350:139131..141275- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060972 ID=TCONS_00060972|Name=TCONS_00060972|organism=Clytia hemisphaerica|type=transcript|length=2145bp|location=Sequence derived from alignment at scaffold_350:139131..141275- (Clytia hemisphaerica)
ATTATTTTGAAATCTTTTCGAATCTTTCCTTAGTCTTGTTCAATATATCT
TGTTTTCTTGACGGCTTGCTATCAATCGGTGCAGTAGAACCGAACCCCAA
CCCTTTGTTTTTTCCATGCACTTGCACGCCAATTGGCTCTGCAATACCTT
GTTGTGATTTGCCAAGCCCTTCGCCAGATTTCCATCCCATTTTAGCCAGC
ATCTTATGTCCGATATTCTCATCAGATATTTCTTTATGTACAGATGCTTT
TTCGACTGGTCTCAAAATATTCTCATAAGGATCACTCCCGACTTCCTTAC
GACGTCTTGCTGCACGATCGGGAACAGATTCGATCAATTTTTTAGGTATG
TAGCCTTTGGATAAACCATATTTTTTCATCATACTTTTGACTTCATGTTT
TCTCTGTTTATTCAAATCTTCCCTGGTCGCCTTCTCTTTTTCAGCTTCTA
GGATGGCTTGTATATTACCGGGCTCGCAATCAAAACATGTCTCGTTTCCA
GTATGAANAGTCGCCTTCTCTTTTTCTGCTTCTAGAATGGCTTGTATATT
ACCAGGCTCGCAATCAAAACACGTCTCGTTTCCAGTATGGACGTGAAAAG
AAATTGTAGTTTCGCCAATTCGAATAAAATCACGATGTGTGACTTCTATA
GGTTCAGATTCACATCTAGCATCCGCTATTCGTTCATCATTGATATAAGT
GCCATTTTGAGTTTTCAAATCTTGTATAAAAAACGTTTTGCTTTCATTTT
CATATAGGATCTTAGCATGAGAGCGACTGGCGAGCTCATCATCAGCTAAA
CAAATAGTATTTGAGGGGTCTTTCCCAATGCTTCCTCCCTGACAAGTCAC
TATGTATAAAGAACCAACATCAACTGATTCGGATTTGACGATCATAGCCC
TGATGCACGGGTCAATAACTGGAGTAGGACCTGCAGGTGACACAGGTTCA
GAACGAATTTCACCATCTGATAGTTGGCCATCTTTCTGATCATTCGAGTC
AGATTCATCTGTCTTTTCCTCAGCAACTTTAATTTGGGAGTGAAATATAT
ACGTTTCTTTTTCTTGATCGTAGTAATAGTATACACCATTCTTGTGGTCA
TAGTACAGCTGACTGTTTGGATCATAATACATTCCACTTTGCCAGTTGTA
ATACATTCCAGAACTTTCATCGTAAGCAAATCCAGATTTGGACATTGCTT
CTTCTGCAGCATTTCTGAGCTCTTCTTCAATATTCAAAGTACCTCCCTCT
TTAGTTGTCTCATCTTCCTCTTTCAGATTTGGTGGCTCTACAATTTTTAT
TCTCTCGGTATTTAGTTTGTCCACCTTCCCATTTTCAGAAATGGTAGAGT
TNTTCTTCTGTTGTATCATCTTCCTCTTTCAGATTTGGTGGCTCTACAAC
TTTTTCTCTCTCGGTATTTAGTTTCTCCACCTTTCCATTTTCAGAAACGG
TAGAGTTGTCAGTTTCTTTTTTCTCCTCCTTAACAATTTTCTCAATATCC
GTTCGCTTTTGTTTACAAATATTACTAGATTCTTTATTAGAAGATTTACC
ATTGGGCTTTTGAACAATGTCAGTTTTTGGGATTTGATGAGTTTTTGTCA
ATTTTCGGCGAGTTGAAAGCTTCTTGGCGGAAGTAGAATCTCCATAAACA
ACAGCTTCTTTCATTTTAGTAACACTTTCAGAGGGAGCATCTTTAGGCTT
AAATTCATCATTATCATGCTTCAGTGTTTTAATTTCCACATTCAATTCAT
TTAATCTCTGTGACATTTGATTGTTGAATTCAGTCATTTGTTGCATTTGT
GCGTAGACTGTTGATTGCCATTGCTTTGACTCCTCTAGAGATTTGTATAA
AGCATGGACAGTTTGTTTAAGTTCATCTATCTCCTTTTCATTTTTCTTGC
TGTTNGCGTAGACTGTCGATTGCCATTGCTTTGACTCCTCAAGAGATTTG
TATAAAACATGGACAGTTTGTTTAAGTTCATCTATCTCATTTTCATTTTT
CTTGCTGTTTTCCCCAGCCCTCTTCAATTCAAGCCTCATTCTTTTGATCA
AATCTTTCTCTTCTAATTCCTCAGACTCTGGAAGATAAATTTTGAAAAAA
ATATTGATTAATTTCAAACTTTAATGAAACTTGTATATGGTGTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060972-exon-scaffold_350-1575043694:140931..141275 | TCONS_00060972-exon-scaffold_350-1575043694:140931..141275 | Clytia hemisphaerica | exon |
| TCONS_00060972-exon-scaffold_350-1575043694:139131..140518 | TCONS_00060972-exon-scaffold_350-1575043694:139131..140518 | Clytia hemisphaerica | exon |
| TCONS_00060972-exon-scaffold_350-1510915933:140931..141275 | TCONS_00060972-exon-scaffold_350-1510915933:140931..141275 | Clytia hemisphaerica | exon |
| TCONS_00060972-exon-scaffold_350-1510915933:139131..140518 | TCONS_00060972-exon-scaffold_350-1510915933:139131..140518 | Clytia hemisphaerica | exon |
| TCONS_00060972-exon-scaffold_350-1491911889:140931..141275 | TCONS_00060972-exon-scaffold_350-1491911889:140931..141275 | Clytia hemisphaerica | exon |
| TCONS_00060972-exon-scaffold_350-1491911889:139131..140518 | TCONS_00060972-exon-scaffold_350-1491911889:139131..140518 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_350 | supercontig | scaffold_350:139131..141275 - |
Blast
The following BLAST results are available for this feature:
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